prot_M-pyrifera_M_contig74792.17683.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74792.17683.1
Unique Nameprot_M-pyrifera_M_contig74792.17683.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length349
Homology
BLAST of mRNA_M-pyrifera_M_contig74792.17683.1 vs. uniprot
Match: A0A7Y2NA05_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2NA05_9ACTN)

HSP 1 Score: 185 bits (470), Expect = 1.370e-50
Identity = 128/285 (44.91%), Postives = 173/285 (60.70%), Query Frame = 0
Query:    1 MILAIAAAVVLLGFVVPWGWPEPVALALVLGAIAVIVTAALVQRLDDTTVAVAADRGLDTRDSFTAALQFAELPGPFGERIRARAERLGSLSSPDEAAPLPSMGRRWAVAGVLGLASIGMAFAPNPQDDVREERAQAEALIDAVADDLEIEAEELAEDPNTEALADQLQDLVEELREADDLAEAQELXXXXXXXXEQSKPDDFASRRAAVEGLDAGVGERPI--AAEGETAEEQLEALADSVGSMSEEEQAALAERLESLAATQAVGNPDVAAALADAAAALQAG 283
            +++  A AVVL G++VPWGW EP A+ALV G +  +V  AL + L +   A +ADRGL T D+F AA++F  L G FGE IR RAE L + SSP +AAPLP++  RWA+A   G A++ M    NPQD VR +RA A    + +A +LE+EAEEL + P T  ++  L  L EELR A    E  EL         Q  P+ FA+ RAA EGL+  +   P+  A  G +A +Q+   A  +  +S+ EQ  LAERLE +A +QA G+P  A AL +AAA L+AG
Sbjct:   27 VVVGAALAVVLTGWLVPWGWFEPAAIALVAGTLVGVVAFALFRPLTEIRAARSADRGLKTDDAFGAAVEFETLDGDFGESIRQRAETLAATSSPKQAAPLPALRGRWAIAAAFGAAALVMGIVTNPQDQVRADRAAANEFAEELATELELEAEEL-DTPATAEISAALDKLAEELRAAQSFEEIAELLSEAETELGQRSPN-FAAERAAAEGLERSLESNPLPGAEAGSSAADQIAQAAAGLDGLSDLEQKDLAERLEQIADSQAAGDPATAEALREAAAELKAG 309          
BLAST of mRNA_M-pyrifera_M_contig74792.17683.1 vs. uniprot
Match: A0A7Y2GLF1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GLF1_9ACTN)

HSP 1 Score: 157 bits (397), Expect = 8.310e-40
Identity = 115/285 (40.35%), Postives = 163/285 (57.19%), Query Frame = 0
Query:    6 AAAVVLLGFVVPWGWPEPVALALVLGAIAVIVTAALVQRLDDTTVAVAADRGLDTRDSFTAALQFAELPGPFGERIRARAERLGSLSSPDEAAPLP--SMGRRWAVAGVLGLASIGMAFAPNPQDDVREERAQAEALIDAVADDLEIEAEELAEDPNT----EALADQLQDLVEELREADDLAEAQELXXXXXXXXEQSKPDDFASRRAAVEGLDAGVGERPI-AAEGETAEEQLEALADSVGSMSEEEQAALAERLESLAATQAVGNPDVAAALADAAAALQAG 283
            A A+VL+G++ PWGWPEP A+ LV+ ++  IV  A   ++     A AADRGL+T D  T ALQ      PFG  I +RAE +   +   +A PLP  + G+RWA   ++   +IG+   PNPQDDVR +RA  +  I   A+ +E   EEL  +P T    E L  +L+ L+++L EAD + EA           +     +F S++AA  GLD  +   P+  A G  A +QLE   D + +++ E+Q ALA+RL+ LA  QAVGNP+ AAAL  AA AL+ G
Sbjct:   52 ALALVLIGWLKPWGWPEPAAIGLVVVSLLAIVAVAFGVKIPSALSARAADRGLETDDVLTTALQVPPDQRPFGPEIHSRAEAVAGGARSADAVPLPVTAGGKRWAGVALVAALTIGLGLWPNPQDDVRAQRASDQQRIAEEAEQIEELIEELQAEPATSPAEEELISELEQLLQDLEEADSIEEALADLAEAEAEIDAGITPEFLSQKAAASGLDRQLESEPLPGAAGGDAADQLEQTGDELENLTPEDQEALADRLDQLADDQAVGNPEAAAALRQAAEALRNG 336          
BLAST of mRNA_M-pyrifera_M_contig74792.17683.1 vs. uniprot
Match: A0A7Y1U5H2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1U5H2_9ACTN)

HSP 1 Score: 143 bits (360), Expect = 1.040e-34
Identity = 112/283 (39.58%), Postives = 154/283 (54.42%), Query Frame = 0
Query:    4 AIAAAVVLLGFVVPWGWPEPVALALVLGAIAVIVTAALVQRLDDTTVAVAADRGLDTRDSFTAALQFAELPGPFGERIRARAERLGSLSSPDEAAPLPSMGRRWAVAGVLGLASIGMAFAPNPQDDVREERAQAEALIDAVADDLEIEAEEL---AEDPNTEALADQLQDLVEELREADDLAEAQELXXXXXXXXEQSKPDDFASRRAAVEGLDAGVGERPIAAEGETAEEQLEALADSVGSMSEEEQAALAERLESLAATQAVGNPDVAAALADAAAALQAG 283
            A A  VVL+G++ PW WP+  A+ L+  A+  +V AA+V R+ +  VA A DR LDT D+   ALQFA    PFGE I  RA         DEA PLP   + W +A VL  A++ +    NPQD++RE+ A    +I+ VA+  E  A+EL      P  EALAD L++L E+LR ADDL  A E          ++   D  ++RAA +GL   +   P++ EG TA +QL + AD++ S+SEE+Q             Q  G+P  A ALA AA  L  G
Sbjct:   39 AAALLVVLIGWIRPWAWPDVAAIVLLAVAVVGVVVAAMVLRVSEPAVARALDRALDTDDALVTALQFAPTE-PFGEAIHRRAAGYADADV-DEALPLPWKPKPWMIALVLVAAAVALIIVRNPQDEIREQNAADREVIEEVAEQFEERADELDGVVVGPEAEALADDLRELAEQLRNADDLDAAIEELEGAQDELLRTIDADALAQRAAAQGLQRTLQNNPVS-EGATAADQLASAADALDSLSEEQQXXXXXXXXXXXXXQTAGDPATAEALAQAAQELAEG 318          
BLAST of mRNA_M-pyrifera_M_contig74792.17683.1 vs. uniprot
Match: A0A3C2B2G8_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B2G8_9ACTN)

HSP 1 Score: 94.4 bits (233), Expect = 2.020e-18
Identity = 100/283 (35.34%), Postives = 143/283 (50.53%), Query Frame = 0
Query:    6 AAAVVLLGFVVPWGWPEPVALALVLGAIAVIVTAALVQRLDDTTVAVAADRGLDTRDSFTAALQFAE---LPGPFGERIRARAERLGSLSSPDEAAPLPSMGRRWAVAGVLGLASIGMAFAPNPQDDVREERAQAEALIDAVADDLEIEAEELAEDPNTEALADQLQDLVEELREADDLAEAQELXXXXXXXXEQSKPDDFASRRAAVEGLDAGVGERPI--AAEGETAEEQLEALADSVGSMSEEEQAALAERLESLAATQAVGNPDVAAALADAAAALQAG 283
            A A+VLLG +    W EP A+ +V  A+  IV  A ++R+ D+ VA AADRG+ T+D+F+ +L+ A+       F  R+  RA  L S +   +A          AVA V   A++ +A   NPQD  RE+R +    I+AVAD LE EAE L E P+                           XXXXXXXX ++  D+  +++AA EGL   +   P+  A   +T  EQ++ALA+ +  MSE             A TQ  G+P  A AL +AA A++AG
Sbjct:   15 ALALVLLGRLTDAPWAEPAAVGVVAVALLAIVGYAALRRVPDSVVARAADRGMQTKDAFSTSLELADDDVANDDFTRRVHRRAADLASTADAGQAVQYRWYRTPTAVAAVAAPAALVLALMANPQDAAREQRERDRDRIEAVADVLEAEAERLGEQPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAGDNLLAQKAASEGLQRSLENTPLPGATADQTVAEQMDALAEQLPEMSEXXXXXXXXXXXXXADTQEAGDPATADALREAAEAMRAG 297          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74792.17683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7Y2NA05_9ACTN1.370e-5044.91Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A7Y2GLF1_9ACTN8.310e-4040.35Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A7Y1U5H2_9ACTN1.040e-3439.58Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A3C2B2G8_9ACTN2.020e-1835.34Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..349
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..124
NoneNo IPR availableTMHMMTMhelixcoord: 24..42
NoneNo IPR availableTMHMMTMhelixcoord: 2..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74792contigM-pyrifera_M_contig74792:22..1068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74792.17683.1mRNA_M-pyrifera_M_contig74792.17683.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74792 4..1068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74792.17683.1 ID=prot_M-pyrifera_M_contig74792.17683.1|Name=mRNA_M-pyrifera_M_contig74792.17683.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=349bp
MILAIAAAVVLLGFVVPWGWPEPVALALVLGAIAVIVTAALVQRLDDTTV
AVAADRGLDTRDSFTAALQFAELPGPFGERIRARAERLGSLSSPDEAAPL
PSMGRRWAVAGVLGLASIGMAFAPNPQDDVREERAQAEALIDAVADDLEI
EAEELAEDPNTEALADQLQDLVEELREADDLAEAQELLAEAQELLEQSKP
DDFASRRAAVEGLDAGVGERPIAAEGETAEEQLEALADSVGSMSEEEQAA
LAERLESLAATQAVGNPDVAAALADAAAALQAGDTAGAAAALGEAALAQG
LASDAVASQLATSAAAQSLQQAQAQLGQGQGQGDGQGQGEGQGQGQGQG
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