prot_M-pyrifera_M_contig74780.17682.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74780.17682.1
Unique Nameprot_M-pyrifera_M_contig74780.17682.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length46
Homology
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BLAST of mRNA_M-pyrifera_M_contig74780.17682.1 vs. uniprot
Match: D8LQ85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ85_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.140e-23
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:    1 WNSVGFLFLTCYHWWWLAPVNIVTGVNVATMSVPPASLEMFGKYYR 46
            WNSVGF+FLTCYHWWWLAPVN+ TGVNVATMSVPP SLEMFGKYYR
Sbjct:  288 WNSVGFVFLTCYHWWWLAPVNLFTGVNVATMSVPPDSLEMFGKYYR 333
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BLAST of mRNA_M-pyrifera_M_contig74780.17682.1 vs. uniprot
Match: A0A835Z0S0_9STRA (TMEM164 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S0_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.590e-15
Identity = 31/46 (67.39%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:    1 WNSVGFLFLTCYHWWWLAPVNIVTGVNVATMSVPPASLEMFGKYYR 46
            WN+VG++ LTCYH+W+LAPV++VTG+NVATM VPP  LE FG +YR
Sbjct:  224 WNTVGYVLLTCYHFWFLAPVSLVTGINVATMMVPPDPLETFGAWYR 269
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74780.17682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ85_ECTSI1.140e-2391.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0S0_9STRA1.590e-1567.39TMEM164 family-domain-containing protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74780contigM-pyrifera_M_contig74780:763..900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74780.17682.1mRNA_M-pyrifera_M_contig74780.17682.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74780 763..900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74780.17682.1 ID=prot_M-pyrifera_M_contig74780.17682.1|Name=mRNA_M-pyrifera_M_contig74780.17682.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
WNSVGFLFLTCYHWWWLAPVNIVTGVNVATMSVPPASLEMFGKYYR
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