prot_M-pyrifera_M_contig74707.17670.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74707.17670.1
Unique Nameprot_M-pyrifera_M_contig74707.17670.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
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BLAST of mRNA_M-pyrifera_M_contig74707.17670.1 vs. uniprot
Match: A0A838WTC5_9CYAN (Uncharacterized protein (Fragment) n=2 Tax=Cylindrospermopsis raciborskii TaxID=77022 RepID=A0A838WTC5_9CYAN)

HSP 1 Score: 50.8 bits (120), Expect = 1.710e-5
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:    1 SGVVSIFSTTQAFAALKKDGSVVAWGHSSYGGSTSSVASEV 41
            SGV  IFST  AFAALK DGSVV WG S+Y G +SSV+S +
Sbjct:    3 SGVTQIFSTGNAFAALKSDGSVVTWGDSNYXGDSSSVSSSL 43
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74707.17670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A838WTC5_9CYAN1.710e-565.85Uncharacterized protein (Fragment) n=2 Tax=Cylindr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..112
e-value: 3.5E-24
score: 87.3
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 3..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74707contigM-pyrifera_M_contig74707:722..1057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74707.17670.1mRNA_M-pyrifera_M_contig74707.17670.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74707 722..1057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74707.17670.1 ID=prot_M-pyrifera_M_contig74707.17670.1|Name=mRNA_M-pyrifera_M_contig74707.17670.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
SGVVSIFSTTQAFAALKKDGSVVAWGHSSYGGSTSSVASEVESGVVSISS
TTQAFAALKDDGSVVAWGFSSYGGSTSSVASEVESGVVSISSTTQAFAAL
KKDGCVVAWGHS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II