prot_M-pyrifera_M_contig74336.17608.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig74336.17608.1
Unique Name	prot_M-pyrifera_M_contig74336.17608.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	213

Homology

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.730e-28
Identity = 84/214 (39.25%), Postives = 116/214 (54.21%), Query Frame = 0

Query:    2 HTYTH-YDKWDKFDVDAAIAEVDEP-----KLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 206
            HTY   Y +WDKFDVDAA+ E DE      K   AS     + SGS            +V T  K +  S       ++R+E+EK+ GNA Y+RGD+  AIK YTR LG  P     +SNRA+A+LK R++A A +D   ALK    +V K   RRG AR  LG+ R A  DF    ++D  +++ + +L+ T +  R A KR+P+   FS+ V
Sbjct:  109 HTYDKGYKRWDKFDVDAALKEADEEAGIRQKSEQASASASEQSSGSAPL---------RVATTSKASTSS-----TTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHV-KSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPKRTEFSIEV 307

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR)

HSP 1 Score: 118 bits (296), Expect = 4.270e-28
Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGV--GENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 206
            AHTY   Y +W+KFDVDAA+ E DE +          ++S S  A G G S         +VT  S +       + R+E+EK+ GNA Y+RGD+  AIK YTR LG  P     +SNRA+A+LK R++A A +D   ALK    +V K   RRG AR  LG+ R A  DF     +D  +++ + +L+ T +  R A KR+P+   FS+ V
Sbjct:   87 AHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNK---QQSASVQASGTGPS---------RVTATSNIPAASTTTKTREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHV-KSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKRTEFSIEV 285

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN)

HSP 1 Score: 118 bits (296), Expect = 1.580e-27
Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGV--GENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 206
            AHTY   Y +W+KFDVDAA+ E DE +          ++S S  A G G S         +VT  S +       + R+E+EK+ GNA Y+RGD+  AIK YTR LG  P     +SNRA+A+LK R++A A +D   ALK    +V K   RRG AR  LG+ R A  DF     +D  +++ + +L+ T +  R A KR+P+   FS+ V
Sbjct:   87 AHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNK---QQSASVQASGTGPS---------RVTATSNIPAASTTTKTREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHV-KSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKRTEFSIEV 285

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A2R5G9G5_9STRA (Peptidyl-prolyl cis-trans isomerase FKBP4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9G5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.480e-27
Identity = 89/234 (38.03%), Postives = 122/234 (52.14%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVD------------EPKLTPA----SVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGEN----EVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPRFSVAVTRTEEEE 213
            +HTY   Y KW+ FDVD A+AEVD            +PK   A    S  G    SG         S +   +T    + R G   +    E + RD  E++ GN  Y++GDF+ A+K YTRA+G  P    A SNRA+A LKL+D+  A  D   AL++   +V K L RR  AR  LGR R A  DF  V  ++  N++A  EL +T +  R++A+RAPR  V+VTR   +E
Sbjct:   29 SHTYDQGYKKWESFDVDRALAEVDGQATTTGVSPDQDPKAADAPIQASFPGAKLSSGPVTPASIVPSDLSFPQTT-SASSRHGAFPDADPVEAKPRDVTERERGNDYYKKGDFAQAVKFYTRAIGFNPRSAVAYSNRAMALLKLKDFTAADADCCSALELDPTHV-KSLTRRATARNALGRHRAAFVDFALVRELEPQNRQAIAELARTRELVRSSARRAPRTRVSVTRVSSQE 260

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL)

HSP 1 Score: 115 bits (289), Expect = 1.300e-26
Identity = 78/202 (38.61%), Postives = 107/202 (52.97%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 201
            AHTY   Y KWDKFDVDAA+ E D              E  S  A    E+    + T+ KV  +  +G    ++R++IE++ GN  Y+RGD+  AIK YTR LG        +SNRA+A+LK R+Y +A  D   ALK+   +V K   RRG AR  LG+ R A  DF     +D  +K+   ++  T +  R A KRAP+
Sbjct:   96 AHTYDKGYKKWDKFDVDAALQEADGDHSA---------EKQSAQA----ETTTTSLPTK-KVVAKPKIGSVPTKSREDIEREEGNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHV-KSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPK 282

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.300e-26
Identity = 75/203 (36.95%), Postives = 109/203 (53.69%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGEN-EVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 201
            +HTY   Y++W+KFDVDAA+ E DE   T                    +SG      +     R  V  +   ++R+E+EK+ GNA Y+RGD+  AIK YTR LG  P     +SNRA+A+LK R++A A +D   ALK    +V K   RRG AR  LG+ R A  DF    ++D  +++ + +++ T +  R A KRAP+
Sbjct:   90 SHTYDKGYNRWEKFDVDAALKEADEDASTKT------------------KSGAASPPLQSSPVPRRVVAASPSTKSREELEKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHV-KSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPK 273

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: H3GE50_PHYRM (RPAP3_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE50_PHYRM)

HSP 1 Score: 114 bits (284), Expect = 7.400e-26
Identity = 79/210 (37.62%), Postives = 111/210 (52.86%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 206
            AHTY   Y +W+KFDVDAA+ E D       S V + E+S +             V  R              ++R+E+EK+ GNA Y+RGD+  A+K YTR LG  P     +SNRA+A+LK R++A A +D   ALK    +V K   RRG AR  LG+ R A  DF     +D  +++ + +L+ T D  R A KR+P+   FS+ V
Sbjct:   85 AHTYDKGYKRWEKFDVDAALREAD----GGGSAVPIVEDSPASS-----------VPRRVXXXXXXXXXXXXTKSREELEKEEGNAHYKRGDYVAAVKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKANPTHV-KSFSRRGTARNSLGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRDLIRTAIKRSPKRTQFSIEV 278

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT)

HSP 1 Score: 112 bits (280), Expect = 2.050e-25
Identity = 77/216 (35.65%), Postives = 113/216 (52.31%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVDEP------KLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 206
            AHTY   Y +W+KFDVD A+ E DE          P+++V   + SGS                      ++ V     ++R+E+EK+ GNA Y+RGD+  AIK YTR LG  P     +SNRA+A+LK R+YA A +D   AL+    +  K   RRG AR  LG+ R A  DF    ++D  +++ + +L+ T +  R A KR+ +   FS+ V
Sbjct:   83 AHTYDKGYKRWEKFDVDTALKEADEEGDCKQKNKQPSALV---QPSGSAPT----------------AMAKTSVSSTTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHA-KSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSKRTEFSIEV 278

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD)

HSP 1 Score: 108 bits (270), Expect = 6.630e-24
Identity = 77/218 (35.32%), Postives = 109/218 (50.00%), Query Frame = 0

Query:    2 HTYTH-YDKWDKFDVDAAIAEVDEPK-----------------LTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 201
            HTY   Y KW KFDVDAA+ E DE                   L+  +VV                  V + E   K +  +       ++R+E+E++ GNA YQRGD+  AIK YTR LG  P     +SNRA+A LK R++ +A ED + ALK+   ++ K L RRG AR  LG+ R A  DF     +D  +++ + ++  T +  R A KRAP+
Sbjct:   96 HTYDKGYSKWAKFDVDAALREADEDSTSXXXXXXXXXXXXXXXLSSKAVV------------------VEETEPAAKASATT-------KSREELEREDGNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHL-KSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPK 287

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BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A0P1AW29_PLAHL (Uncharacterized conserved protein, contains LRR repeats n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW29_PLAHL)

HSP 1 Score: 107 bits (266), Expect = 1.990e-23
Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 0

Query:    1 AHTYTH-YDKWDKFDVDAAIAEVDE---PKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 201
            AHT+   Y +W+KFDVDAA+ + D+   P+L   S +                   + +  +   T ++       + R+E+E++ GN  Y++GDF  AIK YTR LG  P  V  +SNRA+A+LK R+Y  A +D   AL+    +V K  +RRG AR  LG+ R A  DF    ++D  +++ + +L+ T +  R A KR+P+
Sbjct:   85 AHTHDKGYKRWEKFDVDAALKKADKEDNPQLCNESPIAT-----------------QNLSCQVAATKKTPASLTASKTREELEREDGNLHYKQGDFVAAIKSYTRCLGYNPQNVVVLSNRAMAYLKNREYTNAEDDCTLALETDLTHV-KSYMRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQLQSTRELIRMAIKRSPK 271

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A329RPX3_9STRA	2.730e-28	39.25	RPAP3_C domain-containing protein n=2 Tax=Phytopht...	[more]
A0A081B1U1_PHYPR	4.270e-28	39.15	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
W2RGZ7_PHYPN	1.580e-27	39.15	RPAP3_C domain-containing protein n=11 Tax=Phytoph...	[more]
A0A2R5G9G5_9STRA	9.480e-27	38.03	Peptidyl-prolyl cis-trans isomerase FKBP4 n=1 Tax=...	[more]
A0A8K1FBG6_PYTOL	1.300e-26	38.61	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A6A4EVA2_9STRA	5.300e-26	36.95	RPAP3_C domain-containing protein n=4 Tax=Phytopht...	[more]
H3GE50_PHYRM	7.400e-26	37.62	RPAP3_C domain-containing protein n=1 Tax=Phytopht...	[more]
D0MU02_PHYIT	2.050e-25	35.65	RNA polymerase II-associated protein, putative n=1...	[more]
K3WL17_GLOUD	6.630e-24	35.32	RPAP3_C domain-containing protein n=1 Tax=Globispo...	[more]
A0A0P1AW29_PLAHL	1.990e-23	34.15	Uncharacterized conserved protein, contains LRR re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 145..178 e-value: 0.094 score: 21.8 coord: 76..109 e-value: 0.78 score: 18.8 coord: 110..143 e-value: 18.0 score: 12.8
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 145..178 score: 6.874
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 76..109 score: 9.971
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 110..143 score: 6.284
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 68..212 e-value: 1.4E-31 score: 111.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 78..187
None	No IPR available	PFAM	PF13432	TPR_16	coord: 81..137 e-value: 1.1E-9 score: 38.8
None	No IPR available	PANTHER	PTHR46423	FAMILY NOT NAMED	coord: 6..203
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 76..178 score: 19.467

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig74336	contig	M-pyrifera_M_contig74336:131..885 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig74336.17608.1	mRNA_M-pyrifera_M_contig74336.17608.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig74336 131..885 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig74336.17608.1 ID=prot_M-pyrifera_M_contig74336.17608.1|Name=mRNA_M-pyrifera_M_contig74336.17608.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
AHTYTHYDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGES
GVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYT
RALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLR
RGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAP
RFSVAVTRTEEEE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom