prot_M-pyrifera_M_contig7416.17561.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7416.17561.1
Unique Nameprot_M-pyrifera_M_contig7416.17561.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
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BLAST of mRNA_M-pyrifera_M_contig7416.17561.1 vs. uniprot
Match: A0A6H5JST1_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JST1_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 7.020e-35
Identity = 76/119 (63.87%), Postives = 89/119 (74.79%), Query Frame = 0 
Query:    1 MGVLGTVKEIVQICLAVLVFSDRITLWKMVGLLLAMIGSLSYKVVRGKPSARASTGDGTKGDRQQGQNTGGAPGEGNPGSRLSYSAVSQQEVDEELRVFKYSNTEWELEGELEEFSSFD 119
            MGV GTVKEIVQI LAVLVF++++T + +VGL  A++GS+ YK+ R KPSAR   G G K  R+   N  G   + N G  + YSAVSQQEVDEELRVFKY NTEWELEGELEEFSSFD
Sbjct:  301 MGVFGTVKEIVQIVLAVLVFNEQVTWFNLVGLGWAIVGSMLYKISRAKPSARNGEGGGVKDARRPAHNAQGDE-KANAGVNMPYSAVSQQEVDEELRVFKYENTEWELEGELEEFSSFD 418
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7416.17561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JST1_9PHAE7.020e-3563.87TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7416contigM-pyrifera_M_contig7416:793..3598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7416.17561.1mRNA_M-pyrifera_M_contig7416.17561.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7416 779..3704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7416.17561.1 ID=prot_M-pyrifera_M_contig7416.17561.1|Name=mRNA_M-pyrifera_M_contig7416.17561.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
MGVLGTVKEIVQICLAVLVFSDRITLWKMVGLLLAMIGSLSYKVVRGKPS
ARASTGDGTKGDRQQGQNTGGAPGEGNPGSRLSYSAVSQQEVDEELRVFK
YSNTEWELEGELEEFSSFDDRR*
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