prot_M-pyrifera_M_contig74128.17552.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74128.17552.1
Unique Nameprot_M-pyrifera_M_contig74128.17552.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length158
Homology
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI00188601C7 (probable proline--tRNA ligase, mitochondrial n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI00188601C7)

HSP 1 Score: 130 bits (326), Expect = 1.190e-32
Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 0
Query:    1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 152
            VE    +R     C  GTL   +G+EVGH FYLG KYS  FNA     + + S  EMGCYGLG +RI++AAVE    D+ ++WP  +APY+ C++P  K   A  AAAM E    T   T      ++V DDR ++++GK+L +A+RLGYP V+++   A
Sbjct:  291 VETVVSNRTECPQCKTGTLTESKGIEVGHTFYLGKKYSDMFNAAFSNAQNKPSVAEMGCYGLGVTRILAAAVEVMSTDENIRWPGLLAPYQVCVLPPKKGSKAAEAAAMAEELVHTLGQTLPRLRGEVVFDDRTQMTIGKRLKDAKRLGYPYVVVVGQGA 450          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A3Q3LFV9_9TELE (Proline--tRNA ligase n=2 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3LFV9_9TELE)

HSP 1 Score: 129 bits (325), Expect = 1.550e-32
Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 0
Query:    1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 152
            VE    DRC    C  GTLV  RG+EVGH FYLG KYS  F+A     + + S  EMGCYGLG +RI++AA+E    ++G++WP  +APY+ C++P  K      AAA+ E    +   T      ++VLDDR ++++GK+L +A RLGYP V+++   A
Sbjct:  285 VETLTSDRCRCPQCKTGTLVESRGIEVGHTFYLGKKYSYVFSATFNNPQNKYSVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVLPPKKGSKVGEAAALAEDLVHSLSETLPHLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 444          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: H2VE84_TAKRU (Proline--tRNA ligase n=5 Tax=Tetraodontidae TaxID=31031 RepID=H2VE84_TAKRU)

HSP 1 Score: 129 bits (325), Expect = 1.620e-32
Identity = 69/157 (43.95%), Postives = 101/157 (64.33%), Query Frame = 0
Query:    9 CPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAM-EEVSTTTTD-----HTDIVLDDRKELSVGKKLSEAERLGYPLVLILSANAETSSTK 158
            CP  G  GTLV  +G+EVGH FYLG KYS+ FNA     + + A+ EMGCYGLG +RI++AA+E    ++G++WP  +APY+ C+VP  K   A  AA + EE+  T  D       ++VLDDR ++++GK+L +A +LGYP V+++   A    T+
Sbjct:  299 CPQCGT-GTLVESKGIEVGHTFYLGKKYSNVFNATFSNAQNKLAVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVVPPKKGSKADKAAVIAEELVQTLADALPLLRGEVVLDDRTQMTIGKRLKDASKLGYPYVIVVGQGALEEPTR 454          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A8M1HCR6_BETSP (probable proline--tRNA ligase, mitochondrial n=1 Tax=Betta splendens TaxID=158456 RepID=A0A8M1HCR6_BETSP)

HSP 1 Score: 128 bits (322), Expect = 6.740e-32
Identity = 74/162 (45.68%), Postives = 105/162 (64.81%), Query Frame = 0
Query:    1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVP--KG-KIDPAVLAAAMEEVSTT---TTDHT--DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 152
            VE  + D      C  GTLV  +G+EVGH FYLG KYSS FNA     + +S++ EMGC+GLG +RI++AA+E    ++G+ WP  IAPY+ C+VP  KG K+D A L A  E++  T   T  H   ++VLDDR ++++GK+L +A RLGYP V+++   A
Sbjct:  333 VETISSDTTHCPQCSTGTLVESKGIEVGHTFYLGKKYSSIFNATFSNAQNKSSIAEMGCFGLGVTRILAAAIEVLSTEEGIHWPGLIAPYQVCVVPPKKGSKVDEAALQA--EQLVHTLGETLPHLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 492          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A6P7Y3X3_9AMPH (Proline--tRNA ligase n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7Y3X3_9AMPH)

HSP 1 Score: 127 bits (319), Expect = 9.980e-32
Identity = 64/146 (43.84%), Postives = 94/146 (64.38%), Query Frame = 0
Query:    9 CPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVP-----KGKIDPAVLAAAMEEVSTTTTD-HTDIVLDDRKELSVGKKLSEAERLGYPLVLI 147
            CPA  C G L   +G+E+GH FYLGTKYSSSFNA     + +  L EMGCYGLG +R+++AA+E    +  ++WP  IAPY+ C +P     K +   A++ A  ++++  T     D++LDDR   S+GK+L +A+RLGYP V++
Sbjct:  286 CPA--CQGKLAETKGIEIGHTFYLGTKYSSSFNAAYSNAQNQPVLAEMGCYGLGVTRMLAAAIEVLSTEDSIRWPGLIAPYQVCFIPPKKGSKEESATALVEALYDDITEATPQLKGDMLLDDRSHFSIGKRLKDAKRLGYPYVIV 429          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI001C35892D ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C35892D)

HSP 1 Score: 129 bits (323), Expect = 1.320e-31
Identity = 70/160 (43.75%), Postives = 97/160 (60.62%), Query Frame = 0
Query:    1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAG-IGFGKERSALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 152
            VE  + DR     C  GTLV  +G+EVGH FYLG KYS+ FNA  I    + S  EMGCYGLG +RI++AA+E    ++G++WP  +APY+ CI+P  K      AA + E    T   T      ++VLDDR + ++GK+L +A RLGYP V+++   A
Sbjct:  384 VETMSSDRTDCPQCKTGTLVESKGIEVGHTFYLGKKYSNVFNAAFINAQNKPSVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCILPPKKGSKVDEAAVLAEELVHTLGETFSGLRGEVVLDDRTQATIGKRLKDANRLGYPYVIVVGQGA 543          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A3B4UGG1_SERDU (Proline--tRNA ligase n=1 Tax=Seriola dumerili TaxID=41447 RepID=A0A3B4UGG1_SERDU)

HSP 1 Score: 126 bits (317), Expect = 1.520e-31
Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = 0
Query:    1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTD--HT----------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 152
            VE  + DR     C  GTLV  RG+EVGH FYLG KYS  FNA     + + S  EMGCYGLG +RI++AA+E    ++G++WP  +APY+ C++P  K       + M+EV+    +  HT          ++VLDDR ++++GK+L +A RLGYP V+++   A
Sbjct:  255 VETMSSDRTDCPQCKTGTLVESRGIEVGHTFYLGKKYSQVFNATFSNAQNKPSVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVLPPKK------GSKMDEVAVLADNLVHTLGEALPGLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 414          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI000C6F936E (probable proline--tRNA ligase, mitochondrial n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6F936E)

HSP 1 Score: 124 bits (311), Expect = 1.540e-31
Identity = 63/144 (43.75%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   16 GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 152
            GTLV  RG+EVGH FYLG KYS  FNA     + + S  EMGCYGLG +RI++AA+E    +KG++WP  +APY+ C++P  K       A + +    T   T      ++VLDDR ++++GK+L +A RLGYP V+++   A
Sbjct:  147 GTLVESRGIEVGHTFYLGKKYSQVFNATFSNVQNKPSVAEMGCYGLGVTRILAAAIEVMSTEKGIRWPGLLAPYQVCVLPPKKGSKMDEVAVLADNLVHTLGETLPGLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 290          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A667YHZ7_9TELE (Proline--tRNA ligase n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YHZ7_9TELE)

HSP 1 Score: 127 bits (318), Expect = 1.620e-31
Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 0
Query:    1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLIL 148
            VE  +  R     C  GTLV  +G+EVGH FYLGTKYS  FNA     + +  + EMGCYGLG +RI++AA+E    ++G++WP  +APY+ C+VP  K      AA + E    T   T      ++VLDDR  +++GK+L +A RLGYP V+++
Sbjct:  289 VETVSAGRTDCPQCKTGTLVESKGIEVGHTFYLGTKYSHIFNATFSNAQNKPTIAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVVPPKKGSKVDEAAGLAEELVHTFGETLPCLRGEVVLDDRTNMTIGKRLKDASRLGYPYVVVI 444          
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI0003C4467E (LOW QUALITY PROTEIN: probable proline--tRNA ligase, mitochondrial n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=UPI0003C4467E)

HSP 1 Score: 125 bits (314), Expect = 3.940e-31
Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 0
Query:    9 CPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEE------VSTTTTDHTDIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 152
            CPA  C G L   +G+EVGH FYLGTKYSS FN      + +  L EMGCYGLG +RI++A++E    +  ++WP  IAPY+ C++P  K     + AA+ +      V        D+VLDDR  L++GK+L +A RLGYP VLI    A
Sbjct:  263 CPA--CKGKLAETKGIEVGHTFYLGTKYSSVFNVIFHTAENKPVLTEMGCYGLGITRILAASIEVLSTEDSIRWPTLIAPYQVCLIPPKKGSKEEIGAAIMDNLYDSIVEAVPQIKGDVVLDDRTHLTIGKRLKDANRLGYPYVLIAGKKA 411          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00188601C71.190e-3243.13probable proline--tRNA ligase, mitochondrial n=1 T... [more]
A0A3Q3LFV9_9TELE1.550e-3243.13Proline--tRNA ligase n=2 Tax=Mastacembelus armatus... [more]
H2VE84_TAKRU1.620e-3243.95Proline--tRNA ligase n=5 Tax=Tetraodontidae TaxID=... [more]
A0A8M1HCR6_BETSP6.740e-3245.68probable proline--tRNA ligase, mitochondrial n=1 T... [more]
A0A6P7Y3X3_9AMPH9.980e-3243.84Proline--tRNA ligase n=1 Tax=Microcaecilia unicolo... [more]
UPI001C35892D1.320e-3143.75(large yellow croaker) hypothetical protein n=1 Ta... [more]
A0A3B4UGG1_SERDU1.520e-3141.57Proline--tRNA ligase n=1 Tax=Seriola dumerili TaxI... [more]
UPI000C6F936E1.540e-3143.75probable proline--tRNA ligase, mitochondrial n=1 T... [more]
A0A667YHZ7_9TELE1.620e-3142.95Proline--tRNA ligase n=1 Tax=Myripristis murdjan T... [more]
UPI0003C4467E3.940e-3144.37LOW QUALITY PROTEIN: probable proline--tRNA ligase... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..74
e-value: 2.0E-24
score: 88.3
NoneNo IPR availablePANTHERPTHR42753:SF2PROLINE--TRNA LIGASE, MITOCHONDRIAL-RELATEDcoord: 5..154
NoneNo IPR availablePANTHERPTHR42753FAMILY NOT NAMEDcoord: 5..154
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 19..92
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 77..150
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 75..157
e-value: 4.5E-19
score: 70.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74128contigM-pyrifera_M_contig74128:338..811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74128.17552.1mRNA_M-pyrifera_M_contig74128.17552.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74128 338..811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74128.17552.1 ID=prot_M-pyrifera_M_contig74128.17552.1|Name=mRNA_M-pyrifera_M_contig74128.17552.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
VEAAAGDRCPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER
SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDP
AVLAAAMEEVSTTTTDHTDIVLDDRKELSVGKKLSEAERLGYPLVLILSA
NAETSSTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036621Anticodon-bd_dom_sf