mRNA_M-pyrifera_M_contig74128.17552.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI00188601C7 (probable proline--tRNA ligase, mitochondrial n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI00188601C7) HSP 1 Score: 130 bits (326), Expect = 1.190e-32 Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 456 VE +R C GTL +G+EVGH FYLG KYS FNA + + S EMGCYGLG +RI++AAVE D+ ++WP +APY+ C++P K A AAAM E T T ++V DDR ++++GK+L +A+RLGYP V+++ A Sbjct: 291 VETVVSNRTECPQCKTGTLTESKGIEVGHTFYLGKKYSDMFNAAFSNAQNKPSVAEMGCYGLGVTRILAAAVEVMSTDENIRWPGLLAPYQVCVLPPKKGSKAAEAAAMAEELVHTLGQTLPRLRGEVVFDDRTQMTIGKRLKDAKRLGYPYVVVVGQGA 450
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A3Q3LFV9_9TELE (Proline--tRNA ligase n=2 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3LFV9_9TELE) HSP 1 Score: 129 bits (325), Expect = 1.550e-32 Identity = 69/160 (43.12%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 456 VE DRC C GTLV RG+EVGH FYLG KYS F+A + + S EMGCYGLG +RI++AA+E ++G++WP +APY+ C++P K AAA+ E + T ++VLDDR ++++GK+L +A RLGYP V+++ A Sbjct: 285 VETLTSDRCRCPQCKTGTLVESRGIEVGHTFYLGKKYSYVFSATFNNPQNKYSVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVLPPKKGSKVGEAAALAEDLVHSLSETLPHLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 444
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: H2VE84_TAKRU (Proline--tRNA ligase n=5 Tax=Tetraodontidae TaxID=31031 RepID=H2VE84_TAKRU) HSP 1 Score: 129 bits (325), Expect = 1.620e-32 Identity = 69/157 (43.95%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 25 CPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAM-EEVSTTTTD-----HTDIVLDDRKELSVGKKLSEAERLGYPLVLILSANAETSSTK 474 CP G GTLV +G+EVGH FYLG KYS+ FNA + + A+ EMGCYGLG +RI++AA+E ++G++WP +APY+ C+VP K A AA + EE+ T D ++VLDDR ++++GK+L +A +LGYP V+++ A T+ Sbjct: 299 CPQCGT-GTLVESKGIEVGHTFYLGKKYSNVFNATFSNAQNKLAVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVVPPKKGSKADKAAVIAEELVQTLADALPLLRGEVVLDDRTQMTIGKRLKDASKLGYPYVIVVGQGALEEPTR 454
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A8M1HCR6_BETSP (probable proline--tRNA ligase, mitochondrial n=1 Tax=Betta splendens TaxID=158456 RepID=A0A8M1HCR6_BETSP) HSP 1 Score: 128 bits (322), Expect = 6.740e-32 Identity = 74/162 (45.68%), Postives = 105/162 (64.81%), Query Frame = 1 Query: 1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVP--KG-KIDPAVLAAAMEEVSTT---TTDHT--DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 456 VE + D C GTLV +G+EVGH FYLG KYSS FNA + +S++ EMGC+GLG +RI++AA+E ++G+ WP IAPY+ C+VP KG K+D A L A E++ T T H ++VLDDR ++++GK+L +A RLGYP V+++ A Sbjct: 333 VETISSDTTHCPQCSTGTLVESKGIEVGHTFYLGKKYSSIFNATFSNAQNKSSIAEMGCFGLGVTRILAAAIEVLSTEEGIHWPGLIAPYQVCVVPPKKGSKVDEAALQA--EQLVHTLGETLPHLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 492
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A6P7Y3X3_9AMPH (Proline--tRNA ligase n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7Y3X3_9AMPH) HSP 1 Score: 127 bits (319), Expect = 9.980e-32 Identity = 64/146 (43.84%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 25 CPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVP-----KGKIDPAVLAAAMEEVSTTTTD-HTDIVLDDRKELSVGKKLSEAERLGYPLVLI 441 CPA C G L +G+E+GH FYLGTKYSSSFNA + + L EMGCYGLG +R+++AA+E + ++WP IAPY+ C +P K + A++ A ++++ T D++LDDR S+GK+L +A+RLGYP V++ Sbjct: 286 CPA--CQGKLAETKGIEIGHTFYLGTKYSSSFNAAYSNAQNQPVLAEMGCYGLGVTRMLAAAIEVLSTEDSIRWPGLIAPYQVCFIPPKKGSKEESATALVEALYDDITEATPQLKGDMLLDDRSHFSIGKRLKDAKRLGYPYVIV 429
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI001C35892D ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C35892D) HSP 1 Score: 129 bits (323), Expect = 1.320e-31 Identity = 70/160 (43.75%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAG-IGFGKERSALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 456 VE + DR C GTLV +G+EVGH FYLG KYS+ FNA I + S EMGCYGLG +RI++AA+E ++G++WP +APY+ CI+P K AA + E T T ++VLDDR + ++GK+L +A RLGYP V+++ A Sbjct: 384 VETMSSDRTDCPQCKTGTLVESKGIEVGHTFYLGKKYSNVFNAAFINAQNKPSVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCILPPKKGSKVDEAAVLAEELVHTLGETFSGLRGEVVLDDRTQATIGKRLKDANRLGYPYVIVVGQGA 543
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A3B4UGG1_SERDU (Proline--tRNA ligase n=1 Tax=Seriola dumerili TaxID=41447 RepID=A0A3B4UGG1_SERDU) HSP 1 Score: 126 bits (317), Expect = 1.520e-31 Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTD--HT----------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 456 VE + DR C GTLV RG+EVGH FYLG KYS FNA + + S EMGCYGLG +RI++AA+E ++G++WP +APY+ C++P K + M+EV+ + HT ++VLDDR ++++GK+L +A RLGYP V+++ A Sbjct: 255 VETMSSDRTDCPQCKTGTLVESRGIEVGHTFYLGKKYSQVFNATFSNAQNKPSVAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVLPPKK------GSKMDEVAVLADNLVHTLGEALPGLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 414
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI000C6F936E (probable proline--tRNA ligase, mitochondrial n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6F936E) HSP 1 Score: 124 bits (311), Expect = 1.540e-31 Identity = 63/144 (43.75%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 46 GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKER-SALEMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 456 GTLV RG+EVGH FYLG KYS FNA + + S EMGCYGLG +RI++AA+E +KG++WP +APY+ C++P K A + + T T ++VLDDR ++++GK+L +A RLGYP V+++ A Sbjct: 147 GTLVESRGIEVGHTFYLGKKYSQVFNATFSNVQNKPSVAEMGCYGLGVTRILAAAIEVMSTEKGIRWPGLLAPYQVCVLPPKKGSKMDEVAVLADNLVHTLGETLPGLRGEVVLDDRTQMTIGKRLKDASRLGYPYVIVVGQGA 290
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: A0A667YHZ7_9TELE (Proline--tRNA ligase n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YHZ7_9TELE) HSP 1 Score: 127 bits (318), Expect = 1.620e-31 Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 1 VEAAAGDRCPANGCD-GTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEEVSTTTTDHT------DIVLDDRKELSVGKKLSEAERLGYPLVLIL 444 VE + R C GTLV +G+EVGH FYLGTKYS FNA + + + EMGCYGLG +RI++AA+E ++G++WP +APY+ C+VP K AA + E T T ++VLDDR +++GK+L +A RLGYP V+++ Sbjct: 289 VETVSAGRTDCPQCKTGTLVESKGIEVGHTFYLGTKYSHIFNATFSNAQNKPTIAEMGCYGLGVTRILAAAIEVMSTEEGIRWPGLLAPYQVCVVPPKKGSKVDEAAGLAEELVHTFGETLPCLRGEVVLDDRTNMTIGKRLKDASRLGYPYVVVI 444
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Match: UPI0003C4467E (LOW QUALITY PROTEIN: probable proline--tRNA ligase, mitochondrial n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=UPI0003C4467E) HSP 1 Score: 125 bits (314), Expect = 3.940e-31 Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 25 CPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERSAL-EMGCYGLGTSRIISAAVEHYHDDKGLKWPPSIAPYKACIVPKGKIDPAVLAAAMEE------VSTTTTDHTDIVLDDRKELSVGKKLSEAERLGYPLVLILSANA 456 CPA C G L +G+EVGH FYLGTKYSS FN + + L EMGCYGLG +RI++A++E + ++WP IAPY+ C++P K + AA+ + V D+VLDDR L++GK+L +A RLGYP VLI A Sbjct: 263 CPA--CKGKLAETKGIEVGHTFYLGTKYSSVFNVIFHTAENKPVLTEMGCYGLGITRILAASIEVLSTEDSIRWPTLIAPYQVCLIPPKKGSKEEIGAAIMDNLYDSIVEAVPQIKGDVVLDDRTHLTIGKRLKDANRLGYPYVLIAGKKA 411 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74128.17552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74128.17552.1 >prot_M-pyrifera_M_contig74128.17552.1 ID=prot_M-pyrifera_M_contig74128.17552.1|Name=mRNA_M-pyrifera_M_contig74128.17552.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp VEAAAGDRCPANGCDGTLVSQRGMEVGHAFYLGTKYSSSFNAGIGFGKERback to top mRNA from alignment at M-pyrifera_M_contig74128:338..811+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74128.17552.1 ID=mRNA_M-pyrifera_M_contig74128.17552.1|Name=mRNA_M-pyrifera_M_contig74128.17552.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig74128:338..811+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74128:338..811+ >mRNA_M-pyrifera_M_contig74128.17552.1 ID=mRNA_M-pyrifera_M_contig74128.17552.1|Name=mRNA_M-pyrifera_M_contig74128.17552.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig74128:338..811+ (Macrocystis pyrifera P11B4 male)back to top |