prot_M-pyrifera_M_contig73935.17516.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73935.17516.1
Unique Nameprot_M-pyrifera_M_contig73935.17516.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
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BLAST of mRNA_M-pyrifera_M_contig73935.17516.1 vs. uniprot
Match: D5G988_TUBMM (PfkB domain-containing protein n=1 Tax=Tuber melanosporum (strain Mel28) TaxID=656061 RepID=D5G988_TUBMM)

HSP 1 Score: 54.7 bits (130), Expect = 7.280e-6
Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 0 
Query:    1 MCTALGKDESGVALRNSLEKDGVEVCGQER-EGDRTPQYVAMMHDDGNLVAAIADTEALDSATFSTLFPSSHPSLASP-SVVVAEANLSESILTDLCSHLLSQPTPTPLFLDPVGPSKSARIMSPSI-----LGVTALLAPDSYELHAM 142
            + +A+GKD +G      L+  G+++ G ++ +G  T +YVA+ +  G L  A AD    +SA   TL   +  ++A    VV  + NLS   L  +           PL  +P  PSKS RI+SP++         +L  P+++EL AM
Sbjct:  446 LVSAVGKDLAGTWALERLQALGMDISGVKKIDGGVTARYVAINNSSGELFVAGADMRVFESAEMGTL---ARGAIAKGVKVVCVDGNLSVEGLAGVVRAAAG--LDIPLAFEPTSPSKSTRILSPTLPIYPSTSTVSLTTPNTHELTAM 589
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73935.17516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D5G988_TUBMM7.280e-630.87PfkB domain-containing protein n=1 Tax=Tuber melan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 1..145
e-value: 5.6E-17
score: 63.8
IPR029056Ribokinase-likeSUPERFAMILY53613Ribokinase-likecoord: 2..144
IPR011611Carbohydrate kinase PfkBPFAMPF00294PfkBcoord: 1..144
e-value: 5.1E-7
score: 29.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73935contigM-pyrifera_M_contig73935:617..1051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73935.17516.1mRNA_M-pyrifera_M_contig73935.17516.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73935 617..1066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73935.17516.1 ID=prot_M-pyrifera_M_contig73935.17516.1|Name=mRNA_M-pyrifera_M_contig73935.17516.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
MCTALGKDESGVALRNSLEKDGVEVCGQEREGDRTPQYVAMMHDDGNLVA
AIADTEALDSATFSTLFPSSHPSLASPSVVVAEANLSESILTDLCSHLLS
QPTPTPLFLDPVGPSKSARIMSPSILGVTALLAPDSYELHAMAST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029056Ribokinase-like
IPR011611PfkB_dom