prot_M-pyrifera_M_contig73928.17512.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig73928.17512.1
Unique Name	prot_M-pyrifera_M_contig73928.17512.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	106

Homology

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BLAST of mRNA_M-pyrifera_M_contig73928.17512.1 vs. uniprot
Match: D7FIE4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE4_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 2.520e-36
Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = 0

Query:    1 LLWTRCIRLAHHQRLQARTGVARYDQEADGAMRWVTAAWATGALGAALLFVGASVPGDDRASFSAQGVVHLTLFVSAAAGFVGQATCTAWALRKAR 96
            L W  C++LAHHQRLQARTGVARYD EA+GA+RWV+ AW TGALGA L++  ASVPG++ ASFS QGV HL L  SAA G +GQA CTAWALRKAR
Sbjct:   98 LFW--CVKLAHHQRLQARTGVARYDIEAEGAIRWVSGAWITGALGAMLMYAAASVPGEEGASFSPQGVTHLVLTTSAACGILGQAVCTAWALRKAR 191

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig73928.17512.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig73928.17512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FIE4_ECTSI	2.520e-36	70.83	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 67..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 93..105
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 56..66
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 34..55
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..33
None	No IPR available	TMHMM	TMhelix		coord: 70..92
None	No IPR available	TMHMM	TMhelix		coord: 33..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig73928	contig	M-pyrifera_M_contig73928:153..470 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig73928.17512.1	mRNA_M-pyrifera_M_contig73928.17512.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig73928 153..470 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig73928.17512.1 ID=prot_M-pyrifera_M_contig73928.17512.1|Name=mRNA_M-pyrifera_M_contig73928.17512.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp
LLWTRCIRLAHHQRLQARTGVARYDQEADGAMRWVTAAWATGALGAALLF
VGASVPGDDRASFSAQGVVHLTLFVSAAAGFVGQATCTAWALRKARCGDA
SVLMD*