prot_M-pyrifera_M_contig73925.17511.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73925.17511.1
Unique Nameprot_M-pyrifera_M_contig73925.17511.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length36
Homology
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BLAST of mRNA_M-pyrifera_M_contig73925.17511.1 vs. uniprot
Match: A0A1V9Y4P0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4P0_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 3.560e-6
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    1 TGNPANRQNGAFGYLGLLAMLGMSVELAVSLIRSS 35
            +GNPA R NG FGYLGL A +G+S+E A++LI S+
Sbjct:  110 SGNPAKRMNGGFGYLGLFASIGLSIEAAITLINSA 144
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BLAST of mRNA_M-pyrifera_M_contig73925.17511.1 vs. uniprot
Match: A0A1V9Y7C0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7C0_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 9.900e-6
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0 
Query:    1 TGNPANRQNGAFGYLGLLAMLGMSVELAVSLIRSS 35
            TG+P  R NGAFGYLGL A +G+S+E AV LI S+
Sbjct:  110 TGDPTKRMNGAFGYLGLFAAIGLSIEAAVRLITSA 144
[Close]
BLAST of mRNA_M-pyrifera_M_contig73925.17511.1 vs. uniprot
Match: A0A067CU62_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CU62_SAPPC)

HSP 1 Score: 46.2 bits (108), Expect = 5.410e-5
Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    1 TGNPANRQNGAFGYLGLLAMLGMSVELAVSLIRSS 35
            TG+PA R +G FGYLGL A LG+S+E A++L+ S+
Sbjct:  110 TGDPAKRMHGGFGYLGLFASLGLSIEAAITLLYSA 144
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73925.17511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1V9Y4P0_9STRA3.560e-660.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9Y7C0_9STRA9.900e-662.86Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067CU62_SAPPC5.410e-557.14Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73925contigM-pyrifera_M_contig73925:915..1022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73925.17511.1mRNA_M-pyrifera_M_contig73925.17511.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73925 915..1022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73925.17511.1 ID=prot_M-pyrifera_M_contig73925.17511.1|Name=mRNA_M-pyrifera_M_contig73925.17511.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=36bp
TGNPANRQNGAFGYLGLLAMLGMSVELAVSLIRSS*
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