prot_M-pyrifera_M_contig73893.17503.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73893.17503.1
Unique Nameprot_M-pyrifera_M_contig73893.17503.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length256
Homology
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A7S0PAM9_CAFRO (FACT complex subunit (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PAM9_CAFRO)

HSP 1 Score: 145 bits (366), Expect = 2.870e-39
Identity = 78/186 (41.94%), Postives = 112/186 (60.22%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPT-VEHKDGFVRL-TAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALRDPSFYFSEDEYKDKKPAGWKALIDT 184
            DELA+E RER LR++LN  FR+F ++ +  A+S+P    LEFDAP     F       M   +P RD +VSL   PP V+S+DD+EHVHFERVI  +++FD+    K + VE     VR+ T +     + ++ WL  VVE  YT G+ ++ W T++   R+PSFY  +DE  + KP GW  L+D+
Sbjct:   16 DELAEEQRERNLRQQLNKAFRNFVQKTELVAQSEPHSSALEFDAPSRDLSFHGRALREMVEISPCRDCIVSLSENPPFVLSLDDVEHVHFERVIYGAKNFDIAFVLKASAVEPGQDEVRMVTMVPMQHLDTLQKWLVDVVEQLYTQGTRAMNWKTMMAVAREPSFYSDKDEDGEPKPIGWAFLMDS 201          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A5A8D777_CAFRO (FACT complex subunit n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D777_CAFRO)

HSP 1 Score: 145 bits (366), Expect = 6.530e-36
Identity = 78/186 (41.94%), Postives = 112/186 (60.22%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPT-VEHKDGFVRL-TAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALRDPSFYFSEDEYKDKKPAGWKALIDT 184
            DELA+E RER LR++LN  FR+F ++ +  A+S+P    LEFDAP     F       M   +P RD +VSL   PP V+S+DD+EHVHFERVI  +++FD+    K + VE     VR+ T +     + ++ WL  VVE  YT G+ ++ W T++   R+PSFY  +DE  + KP GW  L+D+
Sbjct:  808 DELAEEQRERNLRQQLNKAFRNFVQKTELVAQSEPHSSALEFDAPSRDLSFHGRALREMVEISPCRDCIVSLSENPPFVLSLDDVEHVHFERVIYGAKNFDIAFVLKASAVEPGQDEVRMVTMVPMQHLDTLQKWLVDVVEQLYTQGTRAMNWKTMMAVAREPSFYSDKDEDGEPKPIGWAFLMDS 993          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A812PW62_9DINO (FACT complex subunit n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PW62_9DINO)

HSP 1 Score: 145 bits (366), Expect = 6.910e-36
Identity = 78/186 (41.94%), Postives = 112/186 (60.22%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPT-VEHKDGFVRL-TAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALRDPSFYFSEDEYKDKKPAGWKALIDT 184
            DELA+E RER LR++LN  FR+F ++ +  A+S+P    LEFDAP     F       M   +P RD +VSL   PP V+S+DD+EHVHFERVI  +++FD+    K + VE     VR+ T +     + ++ WL  VVE  YT G+ ++ W T++   R+PSFY  +DE  + KP GW  L+D+
Sbjct:  898 DELAEEQRERNLRQQLNKAFRNFVQKTELVAQSEPHSSALEFDAPSRDLSFHGRALREMVEISPCRDCIVSLSENPPFVLSLDDVEHVHFERVIYGAKNFDIAFVLKASAVEPGQDEVRMVTMVPMQHLDTLQKWLVDVVEQLYTQGTRAMNWKTMMAVAREPSFYSDKDEDGEPKPIGWAFLMDS 1083          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A1E7FB05_9STRA (FACT complex subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB05_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.600e-26
Identity = 70/183 (38.25%), Postives = 105/183 (57.38%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALRDPSFYF--SEDEYKDKKPAGWKAL 181
            DE+  E RER LRK+LNA FRDF K+V A A  K    ++EFD P     F       M T  PT + LV+L   P  V+ +D ++HVHFERV   S++FD++L  K  ++      R+  I    ++AI++WLT + +LTYT G  ++ W +++   +D   ++  +ED+   KK AGW+ L
Sbjct:  786 DEMDDEQRERTLRKRLNAAFRDFCKKVDAVA--KKNNYEVEFDVPYRDLGFTGNPHKEMVTILPTLNCLVNLTETPFFVVDLDHIDHVHFERVTYMSKAFDMILINKDFIKMP---FRIDMIPNGDKDAIQEWLTSM-DLTYTEGPMNLNWKSILATAKDDDRFYMNTEDDEYTKKEAGWEIL 962          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A7S2V990_9STRA (FACT complex subunit n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V990_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.830e-24
Identity = 75/184 (40.76%), Postives = 105/184 (57.07%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALR-DPSFYFS--EDEYKDKKPAGWKAL 181
            DE+  E RER+LRKKLN  FRDF ++V A A  K     LEFD P     F       M T  PT + LV+L   P  V+ +D+++HVHFERV   S++FD+VL  K   +      R+  I    ++AI++WLT + ELTYT G  ++ W  +V  ++ D  FY +  EDE  +K+ AGW+ L
Sbjct:  799 DEMDDEQRERQLRKKLNGAFRDFCRKVDAVA--KKNNYHLEFDVPYRDLGFTGNPHKEMVTIMPTLNCLVNLTETPFFVVDLDEVDHVHFERVTYMSKAFDIVLVNK---DFNKPPWRVDMIPNGDKDAIQEWLTDM-ELTYTEGPMNLNWKQIVNTVKEDDRFYMNTEEDELTEKE-AGWEFL 975          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A1Z5K1K7_FISSO (FACT complex subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1K7_FISSO)

HSP 1 Score: 110 bits (275), Expect = 8.430e-24
Identity = 72/183 (39.34%), Postives = 107/183 (58.47%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALR-DPSFYFS-EDEYKDKKPAGWKAL 181
            DE+  E RER++RKKLN  F+DF K+V A A+    E  LEFD P     F       M T  PT + LV+L   P  V+ + D++HVHFERV   S++FD+VL  K    +K+ + R+  I    +++I+DWLT + E+TYT G  ++ W  ++  +R D  FY + E++   +K AGW+ L
Sbjct:  805 DEMDDEQRERQMRKKLNQAFKDFCKKVDAVAKKNGYE--LEFDIPYRDLGFTGNPHKEMVTIMPTLNCLVNLTETPFFVVDLVDVDHVHFERVTYMSKAFDMVLVNKDF--NKEPW-RVDMIPNGDKDSIQDWLTDM-EITYTEGPMNLNWKQIIATVRADDRFYMNTEEDSVTEKEAGWEFL 981          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A7S0Y7K9_9STRA (FACT complex subunit n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7K9_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.080e-23
Identity = 67/183 (36.61%), Postives = 103/183 (56.28%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALRDPSFYF--SEDEYKDKKPAGWKAL 181
            DE+  E RER LRK+LN+ FRDF K+V A A  K    +LEFD P     F       M    PT + LV+L   P  V+ +D+++HVHFERV   S++FD++L  K   +      R+  I    ++ I++WLT + ++TYT G  ++ W +++   +D   ++  +ED+   KK AGW+ L
Sbjct:  558 DEMDDEQRERTLRKRLNSAFRDFCKKVDATA--KKNNYELEFDIPYRDLGFTGNPHKEMVNVLPTLNCLVNLTETPFFVVDLDNVDHVHFERVTYMSKAFDIILINKDFTKMP---YRVDMIPNGDKDPIQEWLTDM-DITYTEGPMNLNWKSILNTAKDDDRFYMDTEDDEYTKKEAGWEIL 734          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A7S4ER70_9STRA (FACT complex subunit n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ER70_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.610e-23
Identity = 67/183 (36.61%), Postives = 103/183 (56.28%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALRDPSFYF--SEDEYKDKKPAGWKAL 181
            DE+  E RER LRK+LN+ FRDF K+V A A  K    +LEFD P     F       M    PT + LV+L   P  V+ +D+++HVHFERV   S++FD++L  K   +      R+  I    ++AI++WLT + ++TYT G  ++ W +++   +D   ++  +ED+    K AGW+ L
Sbjct:  470 DEMDDEQRERTLRKRLNSAFRDFCKKVDATA--KKNNYELEFDIPYRDLGFTGNPHKEMVNVLPTLNCLVNLTETPFFVVDLDNVDHVHFERVTYMSKAFDIILINKDFTKMP---WRVDMIPNGDKDAIQEWLTDM-DITYTEGPMNLNWKSILNTAKDDDRFYMNTEDDEYTTKEAGWEIL 646          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A448YVE9_9STRA (FACT complex subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVE9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.860e-23
Identity = 67/183 (36.61%), Postives = 102/183 (55.74%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALRDPSFYF--SEDEYKDKKPAGWKAL 181
            DE+  E RER LRK+LN+ F+DF K+V   A  K    +LEFD P     F       M    PT + LV+L   P  V+ +DD++HVHFERV   S++FD +L  K   +      R+  I    ++AI++WLT + ++TYT G  ++ W +++   +D   ++  +ED+   KK AGW+ L
Sbjct:  799 DEMDDEQRERTLRKRLNSAFKDFCKKVDMTA--KKNNYELEFDVPYRDLGFTGNPHKEMVNVLPTLNCLVNLTETPFFVVDLDDVDHVHFERVTYMSKAFDCILINKDFTKMP---WRVDMIPNGDKDAIQEWLTDM-DITYTEGPMNLNWKSILNTAKDDDRFYMNTEDDEFTKKEAGWEIL 975          
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Match: A0A7S0AWW6_9STRA (FACT complex subunit (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWW6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.430e-23
Identity = 68/184 (36.96%), Postives = 106/184 (57.61%), Query Frame = 0
Query:    1 DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFKFQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSFDLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIGWGTLVKALR-DPSFYFS--EDEYKDKKPAGWKAL 181
            DE+  E RER+LRKKLN  F++F ++V+  AR    +  +EFD P     FQ   +  M    PT + LV+L   P  V+ + D++HVHFERV   S++FD+VL  K   +      R+  I    ++AI++WLT + E++YT G  ++ W  +++ +  D  FY +  EDE  +K+ AGW+ L
Sbjct:   55 DEMDDEQRERQLRKKLNEAFKEFCRKVENTARKN--DYTVEFDIPYRDLGFQGNPNKEMVFIMPTLNCLVNLTETPFFVVDLSDVDHVHFERVTFASKAFDMVLVNK---DFNKQPARVDMIPNGDKDAIQEWLTDM-EISYTEGPMNLNWKQIMQTVAADDRFYMNTEEDEVTEKE-AGWEFL 231          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73893.17503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0PAM9_CAFRO2.870e-3941.94FACT complex subunit (Fragment) n=1 Tax=Cafeteria ... [more]
A0A5A8D777_CAFRO6.530e-3641.94FACT complex subunit n=3 Tax=Cafeteria roenbergens... [more]
A0A812PW62_9DINO6.910e-3641.94FACT complex subunit n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A1E7FB05_9STRA8.600e-2638.25FACT complex subunit n=1 Tax=Fragilariopsis cylind... [more]
A0A7S2V990_9STRA1.830e-2440.76FACT complex subunit n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5K1K7_FISSO8.430e-2439.34FACT complex subunit n=2 Tax=Fistulifera solaris T... [more]
A0A7S0Y7K9_9STRA1.080e-2336.61FACT complex subunit n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S4ER70_9STRA2.610e-2336.61FACT complex subunit n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448YVE9_9STRA2.860e-2336.61FACT complex subunit n=1 Tax=Pseudo-nitzschia mult... [more]
A0A7S0AWW6_9STRA7.430e-2336.96FACT complex subunit (Fragment) n=1 Tax=Minutocell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 51..144
e-value: 2.8E-10
score: 50.2
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 60..135
e-value: 1.7E-10
score: 41.2
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 44..188
e-value: 3.8E-22
score: 80.2
IPR040258FACT complex subunit Spt16PANTHERPTHR13980CDC68 RELATEDcoord: 1..256
NoneNo IPR availablePANTHERPTHR13980:SF15FACT COMPLEX SUBUNIT SPT16coord: 1..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73893contigM-pyrifera_M_contig73893:322..1089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73893.17503.1mRNA_M-pyrifera_M_contig73893.17503.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73893 322..1089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73893.17503.1 ID=prot_M-pyrifera_M_contig73893.17503.1|Name=mRNA_M-pyrifera_M_contig73893.17503.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
DELAQEARERELRKKLNAVFRDFAKRVQAKARSKPEECDLEFDAPDDSFK
FQAATSTGMTTFAPTRDALVSLVARPPVVISVDDLEHVHFERVIVTSRSF
DLVLFYKPTVEHKDGFVRLTAIQADRREAIEDWLTFVVELTYTMGSASIG
WGTLVKALRDPSFYFSEDEYKDKKPAGWKALIDTDDEDEEEDKESSYESE
SFGEEEEEDDDDDFDDAVEDEEDDDDDDEEFEEDEEDEEADWDALEKEAA
AHDKKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013719DUF1747
IPR011993PH-like_dom_sf
IPR040258Spt16