prot_M-pyrifera_M_contig7379.17487.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7379.17487.1
Unique Nameprot_M-pyrifera_M_contig7379.17487.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length202
Homology
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: D7FQK7_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK7_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 2.330e-126
Identity = 181/202 (89.60%), Postives = 193/202 (95.54%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIPGVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQEVDLREVFSRR 202
            MGITGLLPLLKPVTKD+HIR+LKGLTVG+DTYCWLHKGIYSCSAELCQGI TDKFIKYCVERVHLLLSHGVKPYLVFDGG+LPAK  KEEERR +RE+N+QRG+QL+REGN SGAHQFF KAADVTP MAH +I+RIPGVRYVVAPYEADAQLG LARNGHVDAVITEDSDI+LFGCTRVVFKLDRDGTGQEVDLREVFSRR
Sbjct:    1 MGITGLLPLLKPVTKDVHIRELKGLTVGVDTYCWLHKGIYSCSAELCQGIATDKFIKYCVERVHLLLSHGVKPYLVFDGGHLPAKAGKEEERRARRESNLQRGMQLMREGNPSGAHQFFCKAADVTPFMAHQVIKRIPGVRYVVAPYEADAQLGFLARNGHVDAVITEDSDIMLFGCTRVVFKLDRDGTGQEVDLREVFSRR 202          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: A0A835Z506_9STRA (Exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z506_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.690e-86
Identity = 125/205 (60.98%), Postives = 155/205 (75.61%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP---GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQEVDLREVFSRR 202
            MGITGLLP L+PVT+D+H+++L GL VG+DTYCWLHK +Y+C  ELC G+PT+K IK+ + R+ +LL  G+KPYLVFDG YLPAKG KE+ER  KRE + +R  Q LREG+ +GA   F KA DVTP MA   I       G R+VVAPYEADAQLG L R+G +D VITEDSD++LFGCTRV+FKL +D  GQ+V L EVF+ R
Sbjct:    1 MGITGLLPALRPVTRDVHLKELSGLRVGVDTYCWLHKAVYTCPEELCTGVPTEKHIKFALSRLDMLLHFGLKPYLVFDGDYLPAKGGKEKERAEKREESRKRAEQCLREGDTAGARAHFIKAVDVTPAMAAQFIAAARSRGGARFVVAPYEADAQLGYLCRSGQIDLVITEDSDLLLFGCTRVLFKLGKDAAGQQVTLHEVFTER 205          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: A0A2D4BRI3_PYTIN (Exonuclease 1 (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRI3_PYTIN)

HSP 1 Score: 226 bits (577), Expect = 2.330e-69
Identity = 111/195 (56.92%), Postives = 140/195 (71.79%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP--GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQEV 193
            MGI+GLLP+LK +T+   +   +G T+ ID YCWLH+ IY CS ELC G  TDK++ Y +ERV  LL +G+ PY+VFDGG LP K A E++RR  R  N + G+Q  R+ N S A + FS+AADV+P MAH +IQR+   GV+YVVAPYEADAQL  L R G VD VITEDSD + FGC +V+FK+DRDG  QEV
Sbjct:    1 MGISGLLPVLKSITETKDLHSYRGQTLAIDGYCWLHRAIYCCSQELCXGQDTDKYVVYFMERVQALLQNGITPYVVFDGGPLPMKKATEDDRRAARAKNRELGLQYYRQRNYSEARKCFSRAADVSPFMAHRVIQRLKAMGVKYVVAPYEADAQLAFLVRAGLVDGVITEDSDCLPFGCGKVLFKMDRDGVAQEV 195          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: A0A6A7G944_9CRUS (Exonuclease 1 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G944_9CRUS)

HSP 1 Score: 219 bits (559), Expect = 6.330e-69
Identity = 103/200 (51.50%), Postives = 140/200 (70.00%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP--GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQEVDLREV 198
            MGI GLLPLL+ +   +HI   K   VG+DTYCWLHKG+YSCS +LC G  TD++I++C++RV LLL H V P ++FDGG LP K  KE+ER  KR A  ++G+  L EGNA+ A+  F  A DVTPLMA  LI+++    V  +VAPYEAD+QL  L++   +  VI+EDSD++ FGC RV+FK+D  G G+E+ L+ +
Sbjct:    1 MGIQGLLPLLRSIEDSVHISHYKNQRVGVDTYCWLHKGVYSCSTDLCLGRATDRYIEFCLKRVRLLLHHRVIPVMIFDGGKLPQKMEKEKERESKRAAYKEKGLMSLAEGNATAANNCFQHAVDVTPLMASKLIKKLKEMDVECIVAPYEADSQLAFLSKTDQIQCVISEDSDLLTFGCKRVLFKMDEQGHGKEIRLKNL 200          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: A0A484LYD1_9ASTE (Exonuclease 1 n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LYD1_9ASTE)

HSP 1 Score: 221 bits (564), Expect = 8.850e-69
Identity = 106/194 (54.64%), Postives = 142/194 (73.20%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP--GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQE 192
            MGI GLLPLLK +   IHI+DL+G  V +DTY WLHKG  SCS ELC+GIPT K I YC+ RV+LL  +GVKP +VFDGG+LP KG +E +R   R+ ++ R ++    GN + A++ + KA D++P +A++LIQ +    VRYVVAPYEADA++ LLA +  VDAVITEDSD+I FGC R+++K+D+ G G E
Sbjct:    1 MGIQGLLPLLKSIMLPIHIKDLEGCCVAVDTYSWLHKGAVSCSRELCKGIPTSKHINYCMHRVNLLRHYGVKPVMVFDGGFLPMKGEQETKRARSRKESLSRAIEHEANGNQTAAYECYQKAVDISPSVAYDLIQVLKKESVRYVVAPYEADAEMTLLAVSKQVDAVITEDSDLIAFGCPRIIYKMDKYGQGVE 194          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: B0F6T2_CUCSA (Exonuclease 1 n=2 Tax=Cucumis TaxID=3655 RepID=B0F6T2_CUCSA)

HSP 1 Score: 219 bits (559), Expect = 8.030e-68
Identity = 106/194 (54.64%), Postives = 138/194 (71.13%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP--GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQE 192
            MGI GLLPLLK +   IHI+DL+G +V IDTY WLHKG + CS ELC G+PT K I YC+ R++LL  +GVKP LVFDGG+LP K  +E +R   R+ N+ R  +    GN++ A++ + KA D+TP +AH LIQ +    V YVVAPYEADAQ+  LA +  VDAV+TEDSD+I FGC R++FK+D+ G G E
Sbjct:    1 MGIQGLLPLLKSIMLPIHIKDLEGSSVAIDTYSWLHKGAFCCSKELCNGLPTSKHIDYCMHRINLLRHYGVKPVLVFDGGFLPMKNEQEIKRARTRKENLARATEHEMNGNSAAAYECYQKAVDITPSIAHELIQVLKRENVSYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGCPRIIFKMDKFGQGVE 194          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: A0A1V9ZBX7_9STRA (Exonuclease 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBX7_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.960e-67
Identity = 109/204 (53.43%), Postives = 144/204 (70.59%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP--GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQEVDLREVFSRR 202
            MGIT LLP LK +T    + + +G TV +D YCWLH+G+YSCS ELC G  T+K++KY ++RV  LL+ G+ PY+VFDGGYLP K  KEEERR  RE + + G+Q L   N   A Q F KA DV+PLMAH +IQ +    V+Y+VAPYEADAQ+  LARNG VDAVI+EDSD + FGC  V+FK+D+ G   E+ L+++ + +
Sbjct:    1 MGITNLLPQLKSITTSTTLENYRGKTVAVDGYCWLHRGVYSCSQELCLGQETNKYVKYFMDRVEYLLTCGIVPYIVFDGGYLPMKKLKEEERRSSREKHRESGLQYLENKNYEMARQSFIKAVDVSPLMAHRVIQCLKKRNVKYIVAPYEADAQMAYLARNGLVDAVISEDSDCLPFGCHTVLFKMDQVGNVDEIVLKDLANNK 204          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: UPI001263218D (exonuclease 1-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263218D)

HSP 1 Score: 219 bits (558), Expect = 3.710e-67
Identity = 105/192 (54.69%), Postives = 139/192 (72.40%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP--GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTG 190
            MGI GLLPLLK +   IHI++L+G  V +DTY WLHKG +SCS ELC+G+PT + I YC+ RV+LL  +GVKP LVFDGG LP K  +E +R   R+ N+ R ++   +GN S A+ F+ KA D++P +AH+LIQ +    V YVVAPYEADAQ+  LA +  VDA+ITEDSD+I FGC R++FK+D+ G G
Sbjct:    1 MGIQGLLPLLKSIMLPIHIKELEGCCVAVDTYSWLHKGAFSCSRELCKGLPTSRHIGYCMHRVNLLRHYGVKPILVFDGGLLPMKIEQENKRARARKENLARAIERESDGNTSAAYDFYQKAVDISPSIAHDLIQVLKQENVCYVVAPYEADAQMTFLAISRQVDAIITEDSDLIAFGCPRIIFKMDKFGQG 192          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: A0A396GQB6_MEDTR (Exonuclease 1 n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GQB6_MEDTR)

HSP 1 Score: 217 bits (552), Expect = 7.890e-67
Identity = 106/192 (55.21%), Postives = 139/192 (72.40%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIP--GVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTG 190
            MGI GLLPLLK +   IHI+D  G +V IDTY WLHKG  SCS +LC+GIPT + I+YC+ RV+LL  +GVKP LVFDGG LP KG +E +R   R+ N++R V+    GN++ A++ + KA D++P +A  LIQ +    V+YVVAPYEADAQ+  LA +  VDAVITEDSD+I FGC R++FK+D+ G G
Sbjct:    1 MGIHGLLPLLKSIMIPIHIKDFHGCSVAIDTYSWLHKGALSCSTDLCKGIPTTRHIEYCMHRVNLLRHYGVKPILVFDGGLLPMKGDQENKRARSRKENLERAVEHEANGNSTAAYECYQKAVDISPQIARELIQVLKQENVQYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGCPRIIFKMDKFGQG 192          
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Match: A0A251V133_HELAN (Exonuclease 1 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251V133_HELAN)

HSP 1 Score: 216 bits (550), Expect = 1.050e-66
Identity = 105/194 (54.12%), Postives = 139/194 (71.65%), Query Frame = 0
Query:    1 MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGIPTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANMQRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQ--RIPGVRYVVAPYEADAQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQE 192
            MGI GLLPLLK +   IHI+DL+G +V +DTY WLHKG  SCS ELC+  PT K + YC+ RV+LL  +GVKP LVFDGG+LP K  +E +R   R+ N+ R ++    GNAS A++ + KA D++P +A+ LIQ  +   + YVVAPYEADAQ+  LA + HVDAVITEDSD+I FGC R+++K+D+ G G E
Sbjct:    1 MGIQGLLPLLKSIMVPIHIKDLEGCSVAVDTYSWLHKGALSCSKELCKSEPTSKHVNYCMHRVNLLRHYGVKPILVFDGGHLPMKNDQEIKRARSRKENLARAIEHESCGNASAAYECYQKAVDISPEIAYELIQVLKTENISYVVAPYEADAQMTFLAISKHVDAVITEDSDLIPFGCPRIIYKMDKYGQGVE 194          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7379.17487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQK7_ECTSI2.330e-12689.60Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A835Z506_9STRA1.690e-8660.98Exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A2D4BRI3_PYTIN2.330e-6956.92Exonuclease 1 (Fragment) n=1 Tax=Pythium insidiosu... [more]
A0A6A7G944_9CRUS6.330e-6951.50Exonuclease 1 (Fragment) n=1 Tax=Hirondellea gigas... [more]
A0A484LYD1_9ASTE8.850e-6954.64Exonuclease 1 n=2 Tax=Cuscuta campestris TaxID=132... [more]
B0F6T2_CUCSA8.030e-6854.64Exonuclease 1 n=2 Tax=Cucumis TaxID=3655 RepID=B0F... [more]
A0A1V9ZBX7_9STRA1.960e-6753.43Exonuclease 1 n=1 Tax=Thraustotheca clavata TaxID=... [more]
UPI001263218D3.710e-6754.69exonuclease 1-like n=1 Tax=Pistacia vera TaxID=555... [more]
A0A396GQB6_MEDTR7.890e-6755.21Exonuclease 1 n=1 Tax=Medicago truncatula TaxID=38... [more]
A0A251V133_HELAN1.050e-6654.12Exonuclease 1 n=1 Tax=Helianthus annuus TaxID=4232... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006084XPG/Rad2 endonucleasePRINTSPR00853XPGRADSUPERcoord: 73..92
score: 41.41
coord: 156..176
score: 47.77
coord: 135..152
score: 48.78
coord: 24..38
score: 36.04
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 1..198
IPR006086XPG-I domainSMARTSM00484xpgineucoord: 136..201
e-value: 2.3E-16
score: 70.3
IPR006086XPG-I domainPFAMPF00867XPG_Icoord: 139..187
e-value: 2.1E-18
score: 66.5
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 1..99
e-value: 6.6E-31
score: 118.7
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 1..97
e-value: 5.8E-21
score: 74.9
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..202
e-value: 3.5E-75
score: 253.9
IPR032641Exonuclease 1PANTHERPTHR11081:SF8EXONUCLEASE 1coord: 1..198
IPR019974XPG conserved sitePROSITEPS00841XPG_1coord: 71..85
IPR019974XPG conserved sitePROSITEPS00842XPG_2coord: 139..153
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7379contigM-pyrifera_M_contig7379:176..5637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7379.17487.1mRNA_M-pyrifera_M_contig7379.17487.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7379 176..5637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7379.17487.1 ID=prot_M-pyrifera_M_contig7379.17487.1|Name=mRNA_M-pyrifera_M_contig7379.17487.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
MGITGLLPLLKPVTKDIHIRDLKGLTVGIDTYCWLHKGIYSCSAELCQGI
PTDKFIKYCVERVHLLLSHGVKPYLVFDGGYLPAKGAKEEERRVKREANM
QRGVQLLREGNASGAHQFFSKAADVTPLMAHNLIQRIPGVRYVVAPYEAD
AQLGLLARNGHVDAVITEDSDIILFGCTRVVFKLDRDGTGQEVDLREVFS
RR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006084XPG/Rad2
IPR006086XPG-I_dom
IPR006085XPG_DNA_repair_N
IPR032641Exo1
IPR019974XPG_CS
IPR029060PIN-like_dom_sf