prot_M-pyrifera_M_contig73788.17486.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73788.17486.1
Unique Nameprot_M-pyrifera_M_contig73788.17486.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length192
Homology
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: H3GZ44_PHYRM (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZ44_PHYRM)

HSP 1 Score: 177 bits (449), Expect = 2.010e-52
Identity = 84/166 (50.60%), Postives = 118/166 (71.08%), Query Frame = 0
Query:    9 SSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTISAISRGLG 174
            + HP  AFFHL FKA AL+LYLF      +FV  F+ C+LLLAFDFWTVKNV+GRLLV LRWW++L EDGS+EW+FE + E   +++ +DSR+FWT L+ AP +WV L +I+++    EW L+   G +L GAN+ GY RC ++A+ ++Q+ ++QG + A S   G
Sbjct:   55 AKHPVAAFFHLFFKALALLLYLFGSLFISNFVFIFVVCILLLAFDFWTVKNVTGRLLVGLRWWNKLNEDGSSEWVFE-SHEDMTEIDPLDSRVFWTGLYGAPALWVMLLIIAVLKFNVEWALIVVIGVALSGANIIGYTRCKKDAKQKMQSLMSQGALGAFSTSAG 219          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A7S2C953_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C953_9STRA)

HSP 1 Score: 176 bits (445), Expect = 9.600e-52
Identity = 81/161 (50.31%), Postives = 114/161 (70.81%), Query Frame = 0
Query:    5 FLCRSSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGT 165
            F+ +S HP+ AFFHL FK+ AL++Y+F    G DF+   + C+LLLAFDFWTVKNV+GRLLV LRWW+ ++EDG+NEW+FE   E   +VNA DSR+FW  L+V   +W  L VI  + LQF+W ++ F   S+  AN+ GY +CS +A+A+++  + QGT
Sbjct:   65 FIRQSRHPSAAFFHLFFKSLALLVYMFSGLFGFDFIFVCVICILLLAFDFWTVKNVTGRLLVGLRWWNYVKEDGTNEWVFESL-ENMSEVNANDSRVFWMGLYVPVAIWTGLLVIDTLKLQFQWLIVVFIALSMHVANIIGYTKCSSDAKAKMKNMMDQGT 224          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A485KG22_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG22_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.640e-50
Identity = 81/167 (48.50%), Postives = 115/167 (68.86%), Query Frame = 0
Query:    8 RSSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTISAISRGLG 174
            ++ HP  A FHL FK  AL +Y+    +   FV  F+ CVLLLAFDFWTVKNVSGRLLV LRWW+R+ EDGSNEW+FE   E   +++ +D++IFWT L+ AP+VWV   +I+++ L  EW L+     +L GANV GY +CS++A+ ++Q+ +T G + A++   G
Sbjct:   56 KAKHPVAAMFHLLFKVLALTVYILGGIMSDSFVFVFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNEWVFESL-EDMSEIDPLDAKIFWTGLYGAPVVWVLFLLIAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKNKMQSMMTAGALEALNSSAG 221          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A7S1CQ60_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ60_9STRA)

HSP 1 Score: 170 bits (430), Expect = 4.290e-50
Identity = 82/164 (50.00%), Postives = 119/164 (72.56%), Query Frame = 0
Query:    6 LCRSSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTISAI 169
            +C SSHP  AFFH+AFK  A+V+Y+    +GLDFV +F+  VLLL+FDFWTVKNV+GRL+V LRWW+ ++EDG+NEW+FE + +G+ +V+A+D RIFW  +F    VW  L VI++I   F+W LL     +L GAN+YGY++C+ +A+ Q+   VT+   +A+
Sbjct:   41 ICHSSHPVAAFFHVAFKIAAIVVYI----LGLDFVMSFVVLVLLLSFDFWTVKNVTGRLMVGLRWWNHIKEDGTNEWVFE-SHKGTREVDALDWRIFWGGIFGGFAVWAFLLVIAIIKFNFQWMLLVIVALALSGANIYGYLKCNTDAKKQVTGFVTKNLGAAV 199          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A0W8D8W7_PHYNI (Golgi apparatus membrane protein TVP23 homolog n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D8W7_PHYNI)

HSP 1 Score: 170 bits (430), Expect = 1.650e-49
Identity = 79/166 (47.59%), Postives = 115/166 (69.28%), Query Frame = 0
Query:    9 SSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTISAISRGLG 174
            + HP  AFFHL FK  AL+LYLF      +FV  F+ C+LLLAFDFWTVKNV+GRLLV LRWW+++ EDG++EW+FE + E   +++ +DSR+FWT L+ AP +W  L +I+++    EW L+     +L GAN+ GY RC ++A+ ++Q+ ++QG + A S   G
Sbjct:   60 AKHPVAAFFHLFFKGLALLLYLFGSIFISNFVFIFVVCILLLAFDFWTVKNVTGRLLVGLRWWNKINEDGTSEWVFE-SHEDMTEIDPLDSRVFWTGLYGAPALWAMLLIIAVLKFNVEWALIVVVAVALSGANIIGYTRCKKDAKQKMQSLMSQGALGAFSSSAG 224          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A6G0W9V7_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9V7_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.420e-49
Identity = 78/167 (46.71%), Postives = 114/167 (68.26%), Query Frame = 0
Query:    8 RSSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTISAISRGLG 174
            ++ HP  A FHL FK  A+ +Y+    +   FV  F+ CVLLLAFDFWTVKN+SGRLLV LRWW+R+ EDGSNEWIFE   E   +++ +D+RIFWT+L+ AP+VW    +I+++    EW L+     +L GANV GY +CS++A+ ++++ +T G + A++   G
Sbjct:   53 KAKHPVAAMFHLLFKVLAVAVYILGGFVSNSFVFIFVICVLLLAFDFWTVKNISGRLLVGLRWWNRINEDGSNEWIFESL-EDMSEIDPLDARIFWTSLYGAPVVWAFFLLIAILKFNVEWALIAIVALTLSGANVVGYTKCSKDAKDKMRSMMTSGALEALNSSAG 218          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A7S3MG51_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MG51_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.150e-48
Identity = 77/157 (49.04%), Postives = 111/157 (70.70%), Query Frame = 0
Query:    8 RSSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQG 164
            +S HP   FFHL FK+ AL +Y+F   +  +F+  F+ C++LLAFDFWTVKNVSGRLLV LRWWS +++DGSNEWIFE   E   +++ +DSR+FW  L+V+PL W+ L ++  + LQFE+  L      L GAN+ GY++CS  A+A++++ + QG
Sbjct:   44 QSKHPVTIFFHLLFKSLALFMYVFGSWVTTNFIFVFVICIVLLAFDFWTVKNVSGRLLVGLRWWSYVKDDGSNEWIFESL-EDMAEISPVDSRMFWGGLYVSPLCWLFLLIVGFLRLQFEYLPLVIAALMLNGANILGYIKCSSSAKAKMESMMKQG 199          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: F0WX45_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX45_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.220e-48
Identity = 83/173 (47.98%), Postives = 111/173 (64.16%), Query Frame = 0
Query:    3 DTFLCRSSH-PAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTISAISRGLG 174
             TF  R +H P   FFHL FK  AL +Y+F       FV  F+ CVLLLAFDFWTVKN+SGRLLV LRWW+R+ EDG+NEWIFE         +A DSR+FWTAL+  PL+W    +IS++ L  +W L+      L GAN+ GY +C ++AQ +++  +T+G +SA+    G
Sbjct:   52 STFTLRKAHHPIAGFFHLLFKGLALTVYIFGGLFTDSFVFIFVLCVLLLAFDFWTVKNISGRLLVGLRWWNRINEDGTNEWIFESNERKV--THAFDSRLFWTALYCTPLLWALFLIISVLKLNLQWALIVMVALLLNGANIVGYTKCKKDAQQRMKNFMTEGALSALGSSAG 222          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A8K1CJZ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJZ6_PYTOL)

HSP 1 Score: 167 bits (423), Expect = 1.540e-48
Identity = 77/167 (46.11%), Postives = 112/167 (67.07%), Query Frame = 0
Query:    8 RSSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTISAISRGLG 174
             + HP  AFFHL FK  AL LYLF   +   +V  F+ C+LLLAFDFWTVKNVSGRLLV LRWW+R+ +DG+NEWIFE + E   +++ +D+R+FW  L+  P +WV L VI+++    +W L+     +L  AN+ GY +C ++A+ ++Q  ++QG + A+S   G
Sbjct:   57 NAKHPVAAFFHLFFKVLALFLYLFGGVLFDSYVFLFVVCILLLAFDFWTVKNVSGRLLVGLRWWNRINDDGTNEWIFE-SHEDMTEIDPLDARVFWVGLYTTPAIWVFLLVIAVLKFNVQWLLIVLVALTLSAANIIGYTKCKKDAKEKMQALMSQGALGALSTSAG 222          
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Match: A0A3R7H1C8_9STRA (Golgi apparatus membrane protein TVP23 homolog n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H1C8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.870e-48
Identity = 75/158 (47.47%), Postives = 111/158 (70.25%), Query Frame = 0
Query:    9 SSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLLAFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSRIFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCSREAQAQLQTAVTQGTI 166
            + HP  AFFHL FK  AL LYLF      +FV  F+ C+LLLAFDFWTVKNV+GRLLV LRWW+R+ +DG++EW+FE + E   +++ +DSR+FWT L+ AP +WV   +++++    EW L+     +L GAN+ GY RC ++A+ ++Q+ ++QG +
Sbjct:   59 AKHPVAAFFHLLFKGLALALYLFGSIFIDNFVFIFVVCILLLAFDFWTVKNVTGRLLVGLRWWNRINDDGTSEWVFE-SHEDMTEIDPLDSRVFWTGLYGAPALWVLFLIVAVLKFNVEWALIVLVAVALSGANIIGYTRCKKDAKQKMQSLMSQGAL 215          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73788.17486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GZ44_PHYRM2.010e-5250.60Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A7S2C953_9STRA9.600e-5250.31Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A485KG22_9STRA1.640e-5048.50Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A7S1CQ60_9STRA4.290e-5050.00Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A0W8D8W7_PHYNI1.650e-4947.59Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A6G0W9V7_9STRA3.420e-4946.71Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A7S3MG51_9STRA1.150e-4849.04Golgi apparatus membrane protein TVP23 homolog n=1... [more]
F0WX45_9STRA1.220e-4847.98Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A8K1CJZ6_PYTOL1.540e-4846.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7H1C8_9STRA4.870e-4847.47Golgi apparatus membrane protein TVP23 homolog n=2... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008564Golgi apparatus membrane protein TVP23-likePFAMPF05832DUF846coord: 10..149
e-value: 2.0E-50
score: 170.4
IPR008564Golgi apparatus membrane protein TVP23-likePANTHERPTHR13019UNCHARACTERIZEDcoord: 9..163
NoneNo IPR availablePANTHERPTHR13019:SF19coord: 9..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..127
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 13..31
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73788contigM-pyrifera_M_contig73788:4..579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73788.17486.1mRNA_M-pyrifera_M_contig73788.17486.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73788 4..579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73788.17486.1 ID=prot_M-pyrifera_M_contig73788.17486.1|Name=mRNA_M-pyrifera_M_contig73788.17486.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp
MCDTFLCRSSHPAVAFFHLAFKATALVLYLFQRAIGLDFVSTFIYCVLLL
AFDFWTVKNVSGRLLVRLRWWSRLREDGSNEWIFEGAPEGSGQVNAMDSR
IFWTALFVAPLVWVALGVISLIGLQFEWFLLCFCGASLQGANVYGYVRCS
REAQAQLQTAVTQGTISAISRGLGGNSATAIADAGASAGVVG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008564TVP23-like