prot_M-pyrifera_M_contig73707.17467.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73707.17467.1
Unique Nameprot_M-pyrifera_M_contig73707.17467.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length244
Homology
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A6B1C3H3_9ACTN (ABC transporter substrate-binding protein n=7 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1C3H3_9ACTN)

HSP 1 Score: 148 bits (374), Expect = 2.740e-38
Identity = 88/221 (39.82%), Postives = 126/221 (57.01%), Query Frame = 0
Query:   20 VVDPLAPVRGITDDTIRVGIAIPDVSAFSNSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMGCFTELGDTITINGLNLDAGEVSRSDGRLFSVLSDADAALLGGVDFLALELADAKVAITTGEDGGSQQRAEELETLLRFSDIDVVANTQGSVLYTADPAAALAEQDRFAEIWTSSGATHVIGV 240
            VV+  A  RG+T DTI +G+AI DV+ F++ GD +ARYQ + DA NA GG++GR +E++  +WD+LD+  F+AAC  LT+D EVF V+   P G+G + C+ +L +TI IN  +LD  ++  SDGRL +       +LL G++ L  EL  A+V I      G  + AEEL    R   ++V     G      D  AA AE D   E W +     +I V
Sbjct:  104 VVELTATARGVTADTITLGVAITDVTVFADVGDILARYQPLVDATNAAGGINGRRVEIITEQWDILDTVAFEAACVALTEDNEVFLVLGFMPAGWGSIFCYIDLNETIVINTSDLDQQDLDMSDGRLITTRPYQFGSLLAGLELLRPELEGARVVIYGASVDGRIETAEELLRSFRAEILEVTRQQIGG----EDLIAAEAEIDIHVERWRTHNPDWIINV 320          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A6L7PUC3_9ACTN (Amino acid ABC transporter substrate-binding protein n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7PUC3_9ACTN)

HSP 1 Score: 95.1 bits (235), Expect = 7.130e-19
Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 0
Query:   25 APVRGITDDTIRVGIAIPDVSAFS-NSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMGCFTELGDTITINGLNLDAGEVSRSDGRLFS 148
            A  RG+T+  IR+GI   D S F  + GD  A++QV  DA+NA GG++GR+L   +   D++ S G DAAC K  +DE VFA +    +   +  C+TEL DTI +N  ++    +SRS+G LF+
Sbjct:   77 ASFRGVTETEIRIGITSLDASMFGFDQGDLAAKWQVAVDAVNAAGGINGRMLVPFIEVIDVIGSVGADAACVKFVEDEMVFAFVGWLRED--NELCYTELNDTIAVNANDVTPDAISRSNGMLFA 199          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A6L7SH27_9ACTN (Amino acid ABC transporter substrate-binding protein n=6 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7SH27_9ACTN)

HSP 1 Score: 85.9 bits (211), Expect = 1.270e-15
Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = 0
Query:   25 APVRGITDDTIRVGIAIPDVSAFS-NSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMGCFTELGDTITINGLNLDAGEVSRSDGRLFS 148
            A  RG+T+  IR+GI   D S F  + GD  A++QV  DA+NA+GG+ GR+L   +    ++ S   +AAC +  +DE VFA +    +   +  C+TEL DTI +N  ++    ++RS+G LF+
Sbjct:   89 ASFRGVTETEIRIGITSLDASMFGFDQGDLAAKWQVAVDAVNAKGGIHGRMLVPFIEVIQVIGSVEAEAACVRFVEDEMVFAFVGWLRED--NELCYTELNDTIAVNANDVSEEAINRSNGMLFA 211          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A6B1GZK3_9ACTN (Uncharacterized protein n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1GZK3_9ACTN)

HSP 1 Score: 82.0 bits (201), Expect = 2.760e-14
Identity = 44/125 (35.20%), Postives = 74/125 (59.20%), Query Frame = 0
Query:   25 APVRGITDDTIRVGIAIPDVSAFS-NSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMGCFTELGDTITINGLNLDAGEVSRSDGRLFS 148
            A  RG+T+  IR+G+   D   F  + GD  +++QV  DA+NA+GG++GR+L   +   D++ +   DA C K  +D+ VFA +    +   +  C+TE  +TI +NG ++    +SRS+G LF+
Sbjct:   97 ASFRGVTETEIRIGMTSLDAEMFGFDQGDLASKWQVAVDAVNAKGGINGRMLVPFIDVLDVIGTVEADATCVKFVEDKMVFAFVGWLRED--NELCYTERNNTIAVNGNDVTPEAISRSNGLLFA 219          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A7K1Z5X4_9ACTN (ABC transporter substrate-binding protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z5X4_9ACTN)

HSP 1 Score: 78.2 bits (191), Expect = 4.440e-13
Identity = 71/217 (32.72%), Postives = 112/217 (51.61%), Query Frame = 0
Query:   28 RGITDDTIRVGIAIPDVS--AFSNSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMGCFTELGDTITINGLNLDAGEVSRSDGRLFSVLSDADAALLGGVDFL--ALELADAKVAITTGEDGGSQQRAEELETLLRFSDIDVVANTQGSVLYTADPAAALAEQDRFAEIWTSSGATHVIGV 240
            RG+T +TI+VG+   DV+   +S S +  A +QV A  INA+GGV GR++E+V      +D+   +AAC +LT+DEEVF  +    +      C+T L DTITIN    +     +S   +   L  A+ A+   +  L  +  L   KVA++      + + A+ ++ +L  + I+VV+ T      ++D  A   E D   E W S GA  V+ V
Sbjct:    8 RGVTAETIKVGVPYSDVTFIGWSPSHEAAAIWQVAAGTINAQGGVLGRMIEIVTIGVSPVDAVAQEAACVELTEDEEVFVAMGVIRNEIPL--CYTVLHDTITINTYQTNPEIFEQSVAPMIGFLPLAERAVDAQLATLINSGRLEGHKVALSATPT--TIELADTMKGILEGAGIEVVSVTNFQSP-SSDQFAIDNEMDVNFERWVSEGADAVVAV 219          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A6B1B472_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B472_9ACTN)

HSP 1 Score: 75.9 bits (185), Expect = 4.730e-13
Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 0
Query:   28 RGITDDTIRVGIAIPDVS--AFSNSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMGCFTELGDTITIN 130
            RG+T +TI+VG+   DV+   +S S +  A +QV A  INA+GGV GR++E+V      +D+   +AAC +LT+DEEVF  +    +      C+T L DTITIN
Sbjct:   97 RGVTAETIKVGVPYSDVTFIGWSPSHEAAAIWQVAAGTINAQGGVLGRMIEIVTIGVSPVDAVAQEAACVELTEDEEVFVAMGVIRNEIPL--CYTVLHDTITIN 199          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A7X6ARU1_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ARU1_9ACTN)

HSP 1 Score: 72.8 bits (177), Expect = 5.490e-12
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0
Query:   25 APVRGITDDTIRVGIAIPDVSAFSNSG------DQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMG----CFTELGDTITI 129
            A  RG+T+ +I+VG+A+PD  A   +G      D    +Q   D IN EGGV GRL++ V   +D  D+T  D AC +  +D EVF V+      +G +G    C T L +T+ +
Sbjct:   96 ASFRGVTETSIKVGVAVPDFDALQAAGISNYQGDAEIAFQAFFDEINDEGGVHGRLIDPVYVSFDFTDATTQDEACSRFAEDHEVFIVL------YGLLGQSNLCLTNLHETMVM 204          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: D3D3E5_9ACTN (Peripla_BP_6 domain-containing protein n=1 Tax=Frankia sp. EUN1f TaxID=102897 RepID=D3D3E5_9ACTN)

HSP 1 Score: 72.4 bits (176), Expect = 5.050e-11
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   25 APVRGITDDTIRVGIAIPDVSAFS-----NSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMGCFTELGDTITING 131
            A   G+TDD+I +G   PD+         + GD  A +Q + D +N  GG++GR +  V    DLL   G    C +LT+DE+VFAV+    D   D+ C+ +  +TI + G
Sbjct:   50 ATAPGVTDDSITIGFTYPDLETVRQFVDIDHGDYEAVFQALVDKVNENGGINGRTVVPVYGAIDLLAPAGAQRTCVRLTEDEDVFAVLGTFTDD--DVECYVQTHETIVVGG 159          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: A0A6B1C0M0_9ACTN (ABC transporter substrate-binding protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1C0M0_9ACTN)

HSP 1 Score: 70.5 bits (171), Expect = 2.480e-10
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   28 RGITDDTIRVGIAIPDVS-----AFSNS--GDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVITRTPDGFGDMG-------CFTELGDTITING 131
            RG+T DTI VG++  D+       FS +  GDQ    Q +AD IN  GG++GR LE+V  ++  + +T  +AAC +LT+D EVFAV+      FG +G       C  +  +TI + G
Sbjct:  100 RGVTADTITVGVSYLDIDQLVELGFSPASWGDQELVIQALADDINERGGINGRRLEVVTDKYSPIGATEAEAACLRLTEDNEVFAVL------FGFLGPAEVANTCIVDQQETILVGG 211          
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Match: UPI0017DC779B (ABC transporter substrate-binding protein n=1 Tax=Hamadaea sp. TaxID=2024425 RepID=UPI0017DC779B)

HSP 1 Score: 65.5 bits (158), Expect = 6.860e-9
Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0
Query:   29 GITDDTIRVGIAIPDVSAF-----SNSGDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQDEEVFAVI 107
            G+TDD+I+VG+  PD+SA      ++ GD  A Y  +   IN  GG++GR +  V  + ++L        C KLTQDE+VFAVI
Sbjct:   49 GVTDDSIKVGVVYPDLSAAKQFIKTDHGDYEATYTALIKKINDAGGINGRKIVPVFGKINVLSPAAAQETCVKLTQDEKVFAVI 132          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73707.17467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B1C3H3_9ACTN2.740e-3839.82ABC transporter substrate-binding protein n=7 Tax=... [more]
A0A6L7PUC3_9ACTN7.130e-1941.60Amino acid ABC transporter substrate-binding prote... [more]
A0A6L7SH27_9ACTN1.270e-1537.60Amino acid ABC transporter substrate-binding prote... [more]
A0A6B1GZK3_9ACTN2.760e-1435.20Uncharacterized protein n=4 Tax=Acidimicrobiia bac... [more]
A0A7K1Z5X4_9ACTN4.440e-1332.72ABC transporter substrate-binding protein n=2 Tax=... [more]
A0A6B1B472_9ACTN4.730e-1342.86Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A7X6ARU1_9ACTN5.490e-1236.52Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
D3D3E5_9ACTN5.050e-1134.82Peripla_BP_6 domain-containing protein n=1 Tax=Fra... [more]
A0A6B1C0M0_9ACTN2.480e-1038.14ABC transporter substrate-binding protein n=2 Tax=... [more]
UPI0017DC779B6.860e-941.67ABC transporter substrate-binding protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 24..112
e-value: 3.0E-10
score: 42.2
IPR028081Leucine-binding protein domainPFAMPF13458Peripla_BP_6coord: 34..219
e-value: 3.7E-11
score: 43.3
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 34..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73707contigM-pyrifera_M_contig73707:159..890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73707.17467.1mRNA_M-pyrifera_M_contig73707.17467.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73707 159..890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73707.17467.1 ID=prot_M-pyrifera_M_contig73707.17467.1|Name=mRNA_M-pyrifera_M_contig73707.17467.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
DADDTSETDDTAEADAPAEVVDPLAPVRGITDDTIRVGIAIPDVSAFSNS
GDQVARYQVVADAINAEGGVDGRLLELVVAEWDLLDSTGFDAACQKLTQD
EEVFAVITRTPDGFGDMGCFTELGDTITINGLNLDAGEVSRSDGRLFSVL
SDADAALLGGVDFLALELADAKVAITTGEDGGSQQRAEELETLLRFSDID
VVANTQGSVLYTADPAAALAEQDRFAEIWTSSGATHVIGVGNGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028081Leu-bd
IPR028082Peripla_BP_I