prot_M-pyrifera_M_contig73342.17395.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73342.17395.1
Unique Nameprot_M-pyrifera_M_contig73342.17395.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
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BLAST of mRNA_M-pyrifera_M_contig73342.17395.1 vs. uniprot
Match: A0A518D3F9_9BACT (PilZ domain-containing protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D3F9_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 7.360e-5
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:   41 GHTIDVSTAGARTEMMRPARVGDHYLMRLFTKEDQPVEV---VARCLRCILLTENRFEVALRFLAPL 104
            G  +D+S  G R E+  P+ VGD  +++    E++ VE+    ARCLRC +  E R+E + +FL+P+
Sbjct:   57 GTLLDISRGGFRAELDAPSPVGD--VLQAVLVENEEVEIEPRFARCLRCAVAAEGRYEASFQFLSPV 121
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73342.17395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A518D3F9_9BACT7.360e-537.31PilZ domain-containing protein n=1 Tax=Planctomyce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009875PilZ domainPFAMPF07238PilZcoord: 11..107
e-value: 5.1E-8
score: 33.2
NoneNo IPR availableGENE3D2.40.10.220coord: 11..98
e-value: 5.7E-5
score: 25.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73342contigM-pyrifera_M_contig73342:746..1099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73342.17395.1mRNA_M-pyrifera_M_contig73342.17395.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73342 746..1099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73342.17395.1 ID=prot_M-pyrifera_M_contig73342.17395.1|Name=mRNA_M-pyrifera_M_contig73342.17395.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
LERQLAPETEERRGAERHTLRIAVRLNPADASRLDEPATVGHTIDVSTAG
ARTEMMRPARVGDHYLMRLFTKEDQPVEVVARCLRCILLTENRFEVALRF
LAPLGEHDLPLEDDLTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009875PilZ_domain