prot_M-pyrifera_M_contig73062.17346.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73062.17346.1
Unique Nameprot_M-pyrifera_M_contig73062.17346.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length313
Homology
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A811RVS7_9POAL (Transcription elongation factor spt6 n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811RVS7_9POAL)

HSP 1 Score: 71.6 bits (174), Expect = 4.520e-10
Identity = 60/188 (31.91%), Postives = 91/188 (48.40%), Query Frame = 0
Query:  145 DNMGDFISSDEEDDLD-------------QFTETGYGATQDQLEQAKAIFGDMSEYYD--------DYAAAEEQEGASLLVQ-DPSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQEEL-EKEARWVATRLPSSWKLMQYGQEAM----LAKVANVLSFLRVDRMEVPFITQYRKANYCPEL 305
            D M DFI   EED++D             +      G +   L++A+ IFGD+ E           + A + E  GA L  + +P  L E + T+KDE I++ DVPERM     L    P+ + + E+E+ W+ + L     L  +G E M       + NV++ L V++ E+PFI  YRK + CP L
Sbjct:  217 DEMADFIV--EEDEIDGNGQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVDELLALRKQELEREAANSVELRGARLEDEFEPFILAEKYMTTKDEQIKENDVPERMQLSEELTGYPPTNKTMIEEESLWIHSHLTGDGFLSFFGNERMNKFDQKDIVNVVTMLHVNKFEIPFIAMYRKES-CPTL 401          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A814BJW1_9BILA (Transcription elongation factor spt6 n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814BJW1_9BILA)

HSP 1 Score: 70.9 bits (172), Expect = 8.320e-10
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0
Query:  206 DPSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQEELEKEARWVATRLPSSWKLMQYGQEAMLAKVANVLSFLRVDRMEVPFITQYRKANYCPELDPSDLWKI 313
            +P  LE+   T  D+ IR  D PER   +    +  P + ELEKEA W+     ++    Q      + ++ +VL+F+R +  EVPFI QYRK +Y PEL+  DLWK+
Sbjct:  332 EPQELEKNLLTEGDQQIRIEDKPERFMLRQIPVTTEPDEFELEKEADWIF----NTGFQPQNKSHLAIPRIKDVLNFIRNEFFEVPFIGQYRKEHYEPELNLDDLWKV 435          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A6A6VCX5_9PLEO (Transcription elongation factor Spt6 n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6VCX5_9PLEO)

HSP 1 Score: 69.7 bits (169), Expect = 1.910e-9
Identity = 72/241 (29.88%), Postives = 111/241 (46.06%), Query Frame = 0
Query:   99 LDKGNFKRLKKRRKHDEAVAEEEDRLKRKLSSVEAATKRREALAGDDNMGDFISSDE-EDDLDQFTETGY-------------GATQDQLEQAKAIFGDMSEYYDDYA--------AAEEQEGASLLVQD---PSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQEE-----LEKEARWVATRLPSSWKLMQYGQEAMLAKVANVLSFLRVDRMEVPFITQYRKANYCPELDPSD 309
            L +G+ +R  + R  DE  ++ +D ++      +   +R  A+ GD+ M DFI  D   D++D   E G              G  +   E  +A FGD  EY  D+A        A E  EG  L ++D   P+ L E   T +D AIR+ DVPER+    +   E    EE     L++EA+W++  L     L ++ ++     V  VL FL ++ +EVPFI  +RK       D +D
Sbjct:  122 LKRGHEERTNRTRGIDEIFSDNDDAIE----EPDDYRRRHGAMPGDE-MADFIEDDTVPDEMDDDREVGQPGISIITHGLQAAGLDEGAEEDYRAAFGDGGEY--DWALELQEQQDAEEMGEGRELQLKDVIEPAQLAERLLTDEDNAIRELDVPERLQLARKPFREVELPEEKLQARLDEEAQWISQLLWPKKSLPRFYEKPFEKAVKEVLRFLNMENLEVPFIFNHRKDYLIHAPDDAD 355          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A1D6M791_MAIZE (Global transcription factor group B1 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6M791_MAIZE)

HSP 1 Score: 68.6 bits (166), Expect = 3.520e-9
Identity = 60/194 (30.93%), Postives = 92/194 (47.42%), Query Frame = 0
Query:  144 DDNMGDFISSDEEDDLD-------------QFTETGYGATQDQLEQAKAIFGDMSEYYDDYAAAEEQE------------GASLLVQ-DPSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQEE-LEKEARWVATRLPSSWKLMQYGQEAM-----LAKVANVLSFLRVDRMEVPFITQYRKANYCPEL 305
            +D M DFI   EED++D             +      G +   L++A+ IFGD+    D+  A  +QE            GA L  + +P  L E + TSKDE I++ DVPERM     L    P+ +  +E+E+ W+ + L     L  +G E +        + NV++ L  ++ E+PFI  YRK + CP L
Sbjct:  195 EDEMADFIV--EEDEIDGNGQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDV----DELLALRKQELEREALNSGELRGARLEDEFEPFILAEKYMTSKDEQIKENDVPERMQLSEELTGYPPTDKTTIEEESSWIHSHLTGDGFLSFFGNEHINKDIDQKDIVNVVTMLHANKFEIPFIAMYRKES-CPTL 381          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A1D6M795_MAIZE (Transcription elongation factor spt6 n=19 Tax=Panicoideae TaxID=147369 RepID=A0A1D6M795_MAIZE)

HSP 1 Score: 68.6 bits (166), Expect = 4.670e-9
Identity = 60/194 (30.93%), Postives = 92/194 (47.42%), Query Frame = 0
Query:  144 DDNMGDFISSDEEDDLD-------------QFTETGYGATQDQLEQAKAIFGDMSEYYDDYAAAEEQE------------GASLLVQ-DPSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQEE-LEKEARWVATRLPSSWKLMQYGQEAM-----LAKVANVLSFLRVDRMEVPFITQYRKANYCPEL 305
            +D M DFI   EED++D             +      G +   L++A+ IFGD+    D+  A  +QE            GA L  + +P  L E + TSKDE I++ DVPERM     L    P+ +  +E+E+ W+ + L     L  +G E +        + NV++ L  ++ E+PFI  YRK + CP L
Sbjct:  185 EDEMADFIV--EEDEIDGNGQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDV----DELLALRKQELEREALNSGELRGARLEDEFEPFILAEKYMTSKDEQIKENDVPERMQLSEELTGYPPTDKTTIEEESSWIHSHLTGDGFLSFFGNEHINKDIDQKDIVNVVTMLHANKFEIPFIAMYRKES-CPTL 371          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: F0Y9Z1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Z1_AURAN)

HSP 1 Score: 67.8 bits (164), Expect = 8.540e-9
Identity = 82/278 (29.50%), Postives = 123/278 (44.24%), Query Frame = 0
Query:   74 DAEDLQLVRENLGIADSRSRKDDSGLDKGNFKRLKKRRKHDEAVAEEE-----DRLKRKLSSVEAATKR--REALAGDDNMGDFISSDEEDDLD-----QFTE------------TGYGA---TQDQLEQAKAIFGDMSE------YYDDYAAAEEQEGASLLVQ-DPSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQE---ELEKEARWVATRLPSSWKLMQYGQEAMLAKVANVLSFLRVDRMEVPFITQYRKANYCP-ELDPSDLWKI 313
            DAEDL+L+ ENLG A       D   D  +F    K+R  + A  E E      RL           K+   +AL  +DN  DFI    EDDL      Q  E             G GA   +Q Q+     IFG+ +E      + DD     +  GA    + +P  L E + T  DEAIR  D+PER+  +    ++   ++    LE+EA W+A +L    +      +A +  V+ +L F   D  EVPF+  YR+  +   ++ P++LW++
Sbjct:   82 DAEDLELIAENLGAASKPPADADDSDD--DFDDAPKKRPREAAAPEPEAPAXXXRLFXXXXXXXXXEKKVKSDALYDEDNFDDFI----EDDLGIQQALQREEKMGISRARGPAGAGGGADAPSQLQMMDMIDIFGEDAEDFAAKGFSDDXXXXXKAAGAGFRARYEPGLLAEHYVTDADEAIRKRDLPERLQLRSVATAKRTRRDYETHLEEEAAWIARKL----RHPHAPADATVVAVSRLLRFYNEDCYEVPFVAAYRRDYFVDSDIKPAELWRV 349          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: K3Z338_SETIT (Transcription elongation factor spt6 n=16 Tax=Paniceae TaxID=147428 RepID=K3Z338_SETIT)

HSP 1 Score: 67.0 bits (162), Expect = 1.500e-8
Identity = 60/193 (31.09%), Postives = 88/193 (45.60%), Query Frame = 0
Query:  145 DNMGDFISSDEEDDLD-------------QFTETGYGATQDQLEQAKAIFGDMSEYYDDYAAAEEQE------------GASLLVQ-DPSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQE-ELEKEARWVATRLPSSWKLMQYGQEAM-----LAKVANVLSFLRVDRMEVPFITQYRKANYCPEL 305
            D M DFI   EED++D             +      G +   L++A+ IFGD+    DD  A  +QE            G  L  + +P  L E + T+KDE I++ DVPER+     L    P+     ++E+ W+  +L     L  YG E M        + NVL+ L +++ E+PFI  YRK   CP L
Sbjct:  182 DEMADFIV--EEDEIDGNGQVVRRKKVKKKVPRQAAGVSSSALQEAQDIFGDV----DDLLARRKQEIEREAANSGELRGKRLEDEFEPFILAEKYMTTKDEQIKENDVPERIQLSEELTGYPPTDTTRTDEESLWIHNQLTGDGFLSFYGNEHMNKDIDQKDIVNVLNMLHINKFEIPFIAMYRKE-MCPSL 367          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A5J9U8W3_9POAL (S1 motif domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9U8W3_9POAL)

HSP 1 Score: 66.2 bits (160), Expect = 2.760e-8
Identity = 59/188 (31.38%), Postives = 88/188 (46.81%), Query Frame = 0
Query:  144 DDNMGDFISSDEE-DDLDQFTET----------GYGATQDQLEQAKAIFGDMSEYYDDYAAAEEQEGASL------LVQD---PSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQEEL-EKEARWVATRLPSSWKLMQYGQEAMLAKV-----ANVLSFLRVDRMEVPFITQYRKANYCPEL 305
            DD M  FI  +EE D+  QF               G +   L++A  IFGD+ E  +      E+E A+        ++D   P  L E + T+KDE I++ DVPERM     L    P+ + + E+E+ W+  +L     +  +  E     +     A+VLS L  ++ E+PFI  YRK N CP L
Sbjct:  186 DDEMAGFIVDEEEMDEHGQFVRKKKVKRKVPRQAAGVSSSALQEAHDIFGDVDELLERRKIELEREAANSGELRGKRLEDEFEPFILAEKYMTTKDEQIKENDVPERMQLSEELTGYPPTDDVMIEEESVWIHNQLTGDGCVSFFSNEHTNKNIDQKDIASVLSMLHGNKFEIPFIAMYRKDN-CPSL 372          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A3P3Y610_PLABS (S1 motif domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y610_PLABS)

HSP 1 Score: 65.9 bits (159), Expect = 3.500e-8
Identity = 48/150 (32.00%), Postives = 73/150 (48.67%), Query Frame = 0
Query:  173 QLEQAKAIFGDMSEYYDDYAAAEEQEGASLLVQ-------DPSTLEETFATSKDEAIRDADVPERMYGKF--RLASEAPSQEELEKEARWVATRLPSSWKLMQYGQEAMLAKVANVLSFLRVDRMEVPFITQYRKANYCPELDPSDLWKI 313
            Q  +A  IFGDM+E+   +  AEE E    + Q       +PS  E    T+ D+AIR AD+PER+  +   R+  +    E +  EA W+        K      +  +  +  VL F+R   ++VP+I  Y+K  Y P L P+D+W I
Sbjct:  172 QFGEAGEIFGDMTEFLA-FTEAEEIEVVEDVAQKDRGKQIEPSVAERHMVTAADDAIRAADLPERLQPRVAERVTPDGNDAELVFTEAEWIY-----ELKFKHMDADLAVKSIVTVLDFIRRQSLDVPYIQWYQKDYYAP-LKPADIWTI 314          
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Match: A0A4U7ASB8_9PEZI (Transcription elongation factor Spt6 n=2 Tax=Elsinoe australis TaxID=40998 RepID=A0A4U7ASB8_9PEZI)

HSP 1 Score: 65.9 bits (159), Expect = 3.510e-8
Identity = 88/302 (29.14%), Postives = 119/302 (39.40%), Query Frame = 0
Query:   73 LDAEDLQLVRENLGIADSRSRKDDSGLDKGNFKRLKKRRKHDEAVAEEEDRLKRKLSSVEAATKRREALAGD--DNMGDFISSDE--EDDLDQFTET---------GY--------GATQDQLEQAKAIFGDMSEYYDDYA------AAEEQEGASLLVQ-----DPSTLEETFATSKDEAIRDADVPERMY---GKFRLASEAPSQEE--LEKEARWVATRLPSSWKLMQYGQEAMLAKVANVLSFLRVDRMEVPFITQYRKANYCPE------------------------LDPSDLWKI 313
            LD +DL L+    GI       +D G +K  FKRLK+  + D   AE    L+      E     R  +     D   DFI  DE  +D+ D   E          G+        G  +   E   A FGD +EY  D+A      A EEQE    +++     +PS L +   T +D  IR  DVPER       F+     P +EE  L++EA W+   +    +L           V NVL F+ VD +EVPFI   RK     E                        L P+DLW+I
Sbjct:   91 LDEDDLDLI----GIGH-----EDKGEEKSKFKRLKRGHREDRERAESRG-LEDIFDDDEDVQAERRGIGRGLADEFDDFIEEDEFPDDEADAMREDAEVARPSRKGFVDPLKIRGGLDEASQEDMMAAFGDGTEY--DWALELQEQADEEQEDPDKILELKDVFEPSQLVDKMLTDEDNIIRATDVPERYQIARKPFKELDLTPEEEEERLQEEASWMCALMLPKRRLGSDMLGPFETTVKNVLRFMNVDNLEVPFILHNRKDYLIHEERVPSSPDPNNPDKEGYEIKASRLLQPADLWEI 380          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73062.17346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A811RVS7_9POAL4.520e-1031.91Transcription elongation factor spt6 n=1 Tax=Misca... [more]
A0A814BJW1_9BILA8.320e-1037.96Transcription elongation factor spt6 n=1 Tax=Brach... [more]
A0A6A6VCX5_9PLEO1.910e-929.88Transcription elongation factor Spt6 n=1 Tax=Sporo... [more]
A0A1D6M791_MAIZE3.520e-930.93Global transcription factor group B1 n=1 Tax=Zea m... [more]
A0A1D6M795_MAIZE4.670e-930.93Transcription elongation factor spt6 n=19 Tax=Pani... [more]
F0Y9Z1_AURAN8.540e-929.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
K3Z338_SETIT1.500e-831.09Transcription elongation factor spt6 n=16 Tax=Pani... [more]
A0A5J9U8W3_9POAL2.760e-831.38S1 motif domain-containing protein n=1 Tax=Eragros... [more]
A0A3P3Y610_PLABS3.500e-832.00S1 motif domain-containing protein n=2 Tax=Plasmod... [more]
A0A4U7ASB8_9PEZI3.510e-829.14Transcription elongation factor Spt6 n=2 Tax=Elsin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
IPR023319Tex-like protein, HTH domain superfamilyGENE3D1.10.10.650coord: 239..313
e-value: 2.0E-9
score: 39.7
IPR028083Spt6 acidic, N-terminal domainPFAMPF14632SPT6_acidiccoord: 6..111
e-value: 3.3E-6
score: 27.6
IPR028088Helix-turn-helix DNA-binding domain of Spt6PFAMPF14641HTH_44coord: 243..300
e-value: 1.5E-11
score: 44.7
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 5..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73062contigM-pyrifera_M_contig73062:8..1018 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73062.17346.1mRNA_M-pyrifera_M_contig73062.17346.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73062 8..1018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73062.17346.1 ID=prot_M-pyrifera_M_contig73062.17346.1|Name=mRNA_M-pyrifera_M_contig73062.17346.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=313bp
DDDDNDDDSSDDDDSDLDTYEADGFLVDDDDDNGSAGGSDEEEDDVEDGE
DGSEDDEEERKRRRKRKREDYDLDAEDLQLVRENLGIADSRSRKDDSGLD
KGNFKRLKKRRKHDEAVAEEEDRLKRKLSSVEAATKRREALAGDDNMGDF
ISSDEEDDLDQFTETGYGATQDQLEQAKAIFGDMSEYYDDYAAAEEQEGA
SLLVQDPSTLEETFATSKDEAIRDADVPERMYGKFRLASEAPSQEELEKE
ARWVATRLPSSWKLMQYGQEAMLAKVANVLSFLRVDRMEVPFITQYRKAN
YCPELDPSDLWKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023319Tex-like_HTH_dom_sf
IPR028083Spt6_acidic_N_dom
IPR028088Spt6_HTH_DNA-bd_dom
IPR017072TF_Spt6