prot_M-pyrifera_M_contig7297.17327.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7297.17327.1
Unique Nameprot_M-pyrifera_M_contig7297.17327.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length304
Homology
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: D7G8Q3_ECTSI (Mitochondrial ribosomal protein L46 isoform 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q3_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 1.960e-155
Identity = 215/308 (69.81%), Postives = 259/308 (84.09%), Query Frame = 0
Query:    1 MIGGRCTMRLSSGATGRKL-----VSSPLFRQLSVSTLSTKQEMQGFTVRDQRPPRPRIAKEKRKEYLAQRRASFEVEQEKAAGLGLDWSIKSAVLLERLPVIIEDYADWQRDFWDLQTEKAQFGKQFPSEMGFKYDDEKPLTMEEILEQSPIPLAPRRTPADESNDRTTLDRALDDRLVLIIKPRSEAAWRLPETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDAMGTYLKHVI 303
            M   RCTM  SS     KL     + +P  R+LS S L+ KQ+++GFT++D+RPPRPR+AK+KRK+YLA+R+ +FE EQEKA  LGLDW I+SA++LERLPVI+E+Y DWQRDFWDLQT++A +G +FP+EMGFKYDDEK LTME++LEQSP+PLAPRRTPADESNDRTTLDRALD+RLVLI+KPRS   WRLPE++WE GETIRQ AERTA+ +L+K ATRKG RDDVAQLHFVGNCPAGWFWRTADE    +   FGDKVF+NRVQLI G+PT V+ +AAEHLWVTKHEIGEYLG++MG YLKH+I
Sbjct:    1 MFARRCTMLSSSAVRRVKLRPLAVLLAPNCRELSSSNLTKKQQIEGFTIKDRRPPRPRVAKQKRKQYLAERKDAFEAEQEKATSLGLDWGIRSALILERLPVIVEEYTDWQRDFWDLQTKQAHYGAKFPAEMGFKYDDEKSLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLVLIVKPRSGDEWRLPESAWEPGETIRQTAERTAQQLLLKSATRKGQRDDVAQLHFVGNCPAGWFWRTADEEQGGQHEKFGDKVFINRVQLICGQPTVVKRQAAEHLWVTKHEIGEYLGESMGVYLKHLI 308          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: W7TRZ1_9STRA (Mitochondrial ribosomal protein l46 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRZ1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.640e-31
Identity = 87/242 (35.95%), Postives = 123/242 (50.83%), Query Frame = 0
Query:   62 YLAQRRASFEVEQEKAAGLGLDWSIKSAVLLERLPVIIEDYADWQRDFWDLQTEKAQFGKQFPSEMGFKYDD-EKPLTMEEILEQSPIPLAPRRTPADESNDRTTLDRALDDRLVLIIK-PRSEAAWRLP----ETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTG---TFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDA 294
            YL  R A     +  A    L W I +A ++ER P+I+++  DW+  + ++Q E A+ GK FP E+       E   + +E+L + P  LAPR T AD  NDRTTL+RAL +RL L+I+ P +   W LP    E   + G+    +  +T E      AT +    D  + +   N P G  WR   E    +TG   T+GDKVF  R Q + GR   V     E +WVT+ E+GEYL  A
Sbjct:  102 YLQSRAAQLSRHEAAAKEANLPWRIVAASIVERHPIIMKEPEDWEAAYMEMQEEIAKHGKVFPPELNLMGQAAELDRSDDEVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRKTHE------ATVRRFLGDKFEAYVPSNAPVGMHWRVPSEPSTGKTGGEQTYGDKVFFYRAQHLKGRGKVVGEGVEEFVWVTREEMGEYLPQA 337          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: A0A4D9D2E5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2E5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.600e-23
Identity = 71/200 (35.50%), Postives = 101/200 (50.50%), Query Frame = 0
Query:  104 DWQRDFWDLQTEKAQFGKQFPSEMGFK-YDDEKPLTMEEILEQSPIPLAPRRTPADESNDRTTLDRALDDRLVLIIK-PRSEAAWRLP----ETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTG---TFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDA 294
            DW+  + ++Q E A+ GK FP E+    +  E   + +++L + P  LAPR T AD  NDRTTL+RAL +RL L+I+ P +   W LP    E   + G+    +   T E      AT +    +  + +   N P G  WR   E    +TG    +GDKVF  R Q + GR   V     E +WVT+ E+GEYL  A
Sbjct:    6 DWEAAYMEMQEEIAKHGKVFPPELNLMGHAAELDRSDDDVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRNTHE------ATVRRFMGEKFEAYVPSNAPVGVHWRVPSEPSTGKTGGEQAYGDKVFFYRAQHLKGRGKVVGEGVEEFVWVTREEMGEYLPQA 199          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: A0A2P6VD62_9CHLO (Serine threonine-kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VD62_9CHLO)

HSP 1 Score: 105 bits (261), Expect = 2.160e-21
Identity = 78/217 (35.94%), Postives = 110/217 (50.69%), Query Frame = 0
Query:   77 AAGLGLDWSIKSAVLLERLPVIIEDYADWQRDFWDLQTEKA-QFGKQFPSEMGFKYDDEKPLTMEEILEQSPIPLAPRRTPADESNDRTTLDRALDDRLVLIIKPRSEAAWRLPETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEA-AEHLWVTKHEIGEYL 291
            A+       +  AV+ ERLPV++ +  +W+R++++ Q   A ++ K+ P E    + D K   M+E    S  P APR T AD +NDR +L R LD RL +++  R +  W LP+     GET+RQ AER     +   A R          +FVGN PAG           A  G  G  +F +R QLI G P        +EH+WVTK E+GEYL
Sbjct:   40 ASAAAASGKLLGAVVFERLPVVVPEDPEWEREYFEWQDGLAGKYRKELPRE----FTDLKDSEMKEDAGASYEP-APRVTAADHANDRRSLKRRLDQRLFMLV--RQKGGWTLPQQENAEGETMRQTAERALADAVELEAVRP---------YFVGNAPAG----------HAPLGDAGT-LFFHRCQLIQGVPALRGGSGYSEHVWVTKEELGEYL 229          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: V4A4N9_LOTGI (MRP-L46 domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A4N9_LOTGI)

HSP 1 Score: 94.0 bits (232), Expect = 4.480e-19
Identity = 67/234 (28.63%), Postives = 108/234 (46.15%), Query Frame = 0
Query:   84 WSIKSAVLLERLPVIIEDYADWQRDFWDLQTEKAQFGKQFPSEMGFKYDDEK---------PLTMEEI---------------LEQSPIPLAPRRTPADESNDRTTLDRALDDRLVLIIKPR--SEAAWRLPETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYL 291
            W +  AV LER P+I ++  D+++   D  + K +      S+   ++ D+K          LT+EE+                E      APRRT ADE +DR + +R LD++L+LI+K R      W LP + W  GE++RQ A R  ++             D  +  F+GN P G+F     +  +    + G KVF  +     G     E + +++LWVTK E+ +Y+
Sbjct:    1 WDLFGAVCLERRPIITKEMTDYEKKMSDFLS-KLELENSLLSDHELRFRDDKLHAKRIKLEELTVEELENPREMAVEAEDKWKTELEEFTFAPRRTVADEKDDRKSTERKLDEKLILIVKQRLGKTDVWALPHSQWLDGESMRQTANRALDSQC----------GDQIKSCFIGNAPCGFFKYKYPK--KVVNESIGRKVFFFKALYENGPVKLKEGDVSDYLWVTKSELSDYM 221          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: J3S080_CROAD (39S ribosomal protein L46, mitochondrial n=3 Tax=Crotalus TaxID=8728 RepID=J3S080_CROAD)

HSP 1 Score: 93.6 bits (231), Expect = 1.100e-18
Identity = 70/234 (29.91%), Postives = 112/234 (47.86%), Query Frame = 0
Query:   84 WSIKSAVLLERLPVIIEDYADWQRDFWDLQTEKAQFGKQFPSEMGFKYDDEKPLTMEEILEQSPIPL---------------------APRRTPADESNDRTTLDRALDDRLVLIIKPR--SEAAWRLPETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDA 294
            W +  A+ L+R P++ +  +  + +  +L T++ +  K   S+   +   E  L  E   E+  IP                      APR T AD+++DRT+L+R LD  L+L++K +   E  W LP+T W+ GET+R   ER        + T  G R    Q  F+GN P G++     + +R+ T   G KVF  +   + G P     E  ++LWV+K E+G+YL  A
Sbjct:   34 WKLYGALCLQRRPLLAQLPSPEEEEMAEL-TQQIEVEKSLYSDHELRCFAEDELLRERNKEKYDIPEKVVLVQDIEDAWEQKFQKFKPAPRITEADQNDDRTSLNRKLDQNLLLLVKQKFGEEDIWLLPQTEWQQGETLRNTVERV-------LGTLPGIR---MQAKFLGNAPCGFYKFKFPKAIRSETNP-GGKVFFFKA-FLEGSPQLSSKETVDYLWVSKGELGDYLKPA 254          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: A0A8C5MFH1_9ANUR (39S ribosomal protein L46, mitochondrial n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MFH1_9ANUR)

HSP 1 Score: 93.6 bits (231), Expect = 1.730e-18
Identity = 61/168 (36.31%), Postives = 92/168 (54.76%), Query Frame = 0
Query:  139 MEEILEQSP--IPLAPRRTPADESNDRTTLDRALDDRLVLIIKPR--SEAAWRLPETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDAMGTYLKHV 302
            +E++ EQ       APR T ADE ND+++L+R L++ LVL++K +  SE  WRLP+  W+ GET+RQ AER    +           ++  + HF+GN P G++     + LR    T G KVF  +  L +G   F   +  E++WV+K E+ +YL  A   YL  V
Sbjct:  134 LEDLWEQKSRQFKTAPRVTEADEKNDKSSLNRKLENNLVLLVKDKLGSEDIWRLPQVEWQCGETMRQTAERALSNL----------SENRIEAHFLGNAPCGFYKYKFPKSLRTEDMT-GAKVFFFKALLKSG-DLFAAKKNGEYVWVSKDELKDYLKPA---YLAEV 286          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: UPI001ABDC5A1 (39S ribosomal protein L46, mitochondrial isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001ABDC5A1)

HSP 1 Score: 93.2 bits (230), Expect = 1.840e-18
Identity = 72/241 (29.88%), Postives = 117/241 (48.55%), Query Frame = 0
Query:   81 GLDWSIKSAVLLERLPVIIEDYADWQRDFWDLQTEKAQFGKQFPSEMGFK---------------YD----DEKPLTMEEILEQS------PIPLAPRRTPADESNDRTTLDRALDDRLVLIIKPR--SEAAWRLPETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDA 294
            G  W +  AV L+R  V+ +  A  Q++  +L  ++    K F S+   +               YD    +E+ + M + LE +       + LAPR T ADE NDRT+L+R L++ LVL++K +  +E  W  P+  W AGET+RQ AER    +           D+  + HF+GN P G++     + +R      G KVF  +  L+ G+ +    +  +++WV K E+ +YL  A
Sbjct:   38 GSPWRLHGAVCLKRPAVVSQSKAAIQQEVDEL-LQQIDLEKSFYSDHELQLMKDAERLRRKQSDLYDSDEEEEQDIVMAQDLEDTWEQKWKQMKLAPRVTEADEKNDRTSLNRKLENNLVLLVKEKIGNEDIWMFPQIEWVAGETMRQTAERALSDL----------SDNRVEAHFLGNAPCGFYKYKFPKTMRNED-IVGAKVFFFKA-LLKGKSSLTNQKKRDYVWVCKDELKDYLKPA 265          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: A0A091NH04_9PASS (MRP-L46 domain-containing protein (Fragment) n=2 Tax=Acanthisitta chloris TaxID=57068 RepID=A0A091NH04_9PASS)

HSP 1 Score: 92.4 bits (228), Expect = 2.390e-18
Identity = 75/247 (30.36%), Postives = 113/247 (45.75%), Query Frame = 0
Query:   84 WSIKSAVLLERLPVIIEDYADWQRD----------------FWDLQTEKAQFGKQFPSEMGFKYDDE----KPLTMEEILEQS------PIPLAPRRTPADESNDRTTLDRALDDRLVLIIKPR--SEAAWRLPETSWEAGETIRQAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDAMGTYLKHV 302
            W +  A+ L RLP + ++    + +                + D +  K +  +Q        YDD+    K L M + LE            APR T AD++N+RT+LDR LD  L+L++K +  ++  W LP+  W+ GET+R  AER   T L           D  Q   +GN P G +     + +R      G KVF  +  L +   +  E +A +HLWVTK+E+G+YL      YLK V
Sbjct:   17 WRLFGAMCLLRLPRVTQEMEKEEEEVAALMAQVRGEQEKSCYSDHEIRKLEEEEQLKKRKESLYDDDEGSGKTLIMAQDLEDKWEQKLLQFKAAPRITDADKNNNRTSLDRKLDSNLMLLVKQKIGNQELWLLPQVEWQPGETLRSTAERAMATFL----------GDHVQAKILGNAPYGIYKYKFPKAIRTEDNV-GAKVFFFKAFLQSSDLSRAEPKA-DHLWVTKNELGDYL---KSEYLKKV 248          
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Match: UPI000D6A364F (39S ribosomal protein L46, mitochondrial isoform X2 n=2 Tax=Python bivittatus TaxID=176946 RepID=UPI000D6A364F)

HSP 1 Score: 90.5 bits (223), Expect = 5.560e-18
Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 0
Query:  151 APRRTPADESNDRTTLDRALDDRLVLIIKPR--SEAAWRLPETSWEAGETIRQAAERTAETML-VKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRARTGTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDA 294
            APR T AD +NDRT+L+R LD  L+L++K +   E  W LP+T W+ GET+R   ER   T+  ++M           Q  F+GN P G++       +R  + T G KVF  +  L A  P F   E  ++LWV+K E+G+YL  A
Sbjct:   70 APRITDADRNNDRTSLNRKLDQNLLLLVKQKFGDEDIWVLPQTEWQHGETLRDTVERVLVTLPGIQM-----------QAKFLGNAPCGFYKFKFPRAIRTESNT-GGKVFFFKAFLEAS-PQFSSKEKLDYLWVSKGELGDYLKPA 203          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7297.17327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q3_ECTSI1.960e-15569.81Mitochondrial ribosomal protein L46 isoform 2 n=2 ... [more]
W7TRZ1_9STRA2.640e-3135.95Mitochondrial ribosomal protein l46 n=2 Tax=Nannoc... [more]
A0A4D9D2E5_9STRA2.600e-2335.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2P6VD62_9CHLO2.160e-2135.94Serine threonine-kinase n=1 Tax=Micractinium condu... [more]
V4A4N9_LOTGI4.480e-1928.63MRP-L46 domain-containing protein (Fragment) n=1 T... [more]
J3S080_CROAD1.100e-1829.9139S ribosomal protein L46, mitochondrial n=3 Tax=C... [more]
A0A8C5MFH1_9ANUR1.730e-1836.3139S ribosomal protein L46, mitochondrial n=1 Tax=L... [more]
UPI001ABDC5A11.840e-1829.8839S ribosomal protein L46, mitochondrial isoform X... [more]
A0A091NH04_9PASS2.390e-1830.36MRP-L46 domain-containing protein (Fragment) n=2 T... [more]
UPI000D6A364F5.560e-1838.7839S ribosomal protein L46, mitochondrial isoform X... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10coord: 162..303
e-value: 2.8E-26
score: 93.8
IPR04000839S ribosomal protein L46, mitochondrialPANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 60..302
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 172..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7297contigM-pyrifera_M_contig7297:286..4737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7297.17327.1mRNA_M-pyrifera_M_contig7297.17327.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7297 286..4820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7297.17327.1 ID=prot_M-pyrifera_M_contig7297.17327.1|Name=mRNA_M-pyrifera_M_contig7297.17327.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=304bp
MIGGRCTMRLSSGATGRKLVSSPLFRQLSVSTLSTKQEMQGFTVRDQRPP
RPRIAKEKRKEYLAQRRASFEVEQEKAAGLGLDWSIKSAVLLERLPVIIE
DYADWQRDFWDLQTEKAQFGKQFPSEMGFKYDDEKPLTMEEILEQSPIPL
APRRTPADESNDRTTLDRALDDRLVLIIKPRSEAAWRLPETSWEAGETIR
QAAERTAETMLVKMATRKGHRDDVAQLHFVGNCPAGWFWRTADEGLRART
GTFGDKVFVNRVQLIAGRPTFVESEAAEHLWVTKHEIGEYLGDAMGTYLK
HVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040008MRPL46
IPR015797NUDIX_hydrolase-like_dom_sf