prot_M-pyrifera_M_contig727.17269.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig727.17269.1
Unique Nameprot_M-pyrifera_M_contig727.17269.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length157
Homology
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: D8LPP6_ECTSI (AP complex subunit sigma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP6_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 3.580e-103
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVAH-GDAGFGSKSS 156
            MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVD DDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMD  +H GD+ FGSKSS
Sbjct:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDSDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDSSSHAGDSVFGSKSS 157          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: A0A835Z9B6_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B6_9STRA)

HSP 1 Score: 276 bits (707), Expect = 1.400e-93
Identity = 138/156 (88.46%), Postives = 147/156 (94.23%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKV-AHGDAGFGSKS 155
            MIKFVLMVNKMGQTRVSSYY+W+PIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGV    D+ENELG+LEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMV+NG +CE NR+N+LKPL LMDKV A+ DAGFGSKS
Sbjct:    1 MIKFVLMVNKMGQTRVSSYYEWLPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVD-SSDEENELGMLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVMNGCVCEANRDNILKPLQLMDKVSANDDAGFGSKS 155          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: A0A7S2UUI5_9STRA (AP complex subunit sigma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUI5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 8.640e-78
Identity = 112/154 (72.73%), Postives = 134/154 (87.01%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVAHGDAGFGSK 154
            MIKF+LMVNK GQTR+SSY++WM IPERVALE+E++R+C SR+E QCSF E+RGY++IYRRYASLFFIVGVG D  +ENELGVLEFIH LVETLDKYF+SVCELDIMFN+EK HFILDEMV+NGYI E NR N+LKP+  MDK+A+ +    S+
Sbjct:    1 MIKFILMVNKQGQTRLSSYFEWMTIPERVALESEIIRKCLSRAEYQCSFLEYRGYRVIYRRYASLFFIVGVGAD--EENELGVLEFIHSLVETLDKYFESVCELDIMFNMEKAHFILDEMVMNGYIMETNRTNILKPIAQMDKMANSEDSIFSR 152          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: F0Y567_AURAN (AP complex subunit sigma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y567_AURAN)

HSP 1 Score: 227 bits (578), Expect = 5.560e-74
Identity = 105/144 (72.92%), Postives = 128/144 (88.89%), Query Frame = 0
Query:    2 IKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVA 145
            I+F+LMVNK GQTR+S+YY+W+P+PERVALE+E++R+C SRSE QCSF E+RGYK++YRRYASLFFIVG   ++D ENELG+LEFIH LVETLDKYF+SVCELDIMFNLEK HFILDEMV+NG I E N+ NVLKP+ LM+K +
Sbjct:    3 IRFILMVNKQGQTRLSTYYEWLPMPERVALESEIIRKCLSRSEFQCSFVEYRGYKVVYRRYASLFFIVGC--EQDSENELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFILDEMVMNGCIVETNKANVLKPIALMEKAS 144          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: A0A7S3ZZG7_9STRA (AP complex subunit sigma n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZG7_9STRA)

HSP 1 Score: 225 bits (573), Expect = 3.100e-73
Identity = 106/144 (73.61%), Postives = 127/144 (88.19%), Query Frame = 0
Query:    2 IKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVA 145
            IKFVLMVNK GQTR+S+YY+W+ +PERVALEAE++R C SRSE QCSF E+RGYK++YRRYASLFFIVGV  D+D ENELG+LEFIH LVETLDKYF+SVCELDIMFNLEK HFILDEMV++G + E N+ N+LKP+ LM+K +
Sbjct:    3 IKFVLMVNKQGQTRLSTYYEWLSMPERVALEAEIIRTCLSRSEFQCSFVEYRGYKVVYRRYASLFFIVGV--DQDGENELGILEFIHALVETLDKYFESVCELDIMFNLEKAHFILDEMVVDGCVVETNKVNILKPIALMEKAS 144          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: A0A7S2FA09_9STRA (AP complex subunit sigma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FA09_9STRA)

HSP 1 Score: 224 bits (572), Expect = 8.850e-73
Identity = 111/154 (72.08%), Postives = 132/154 (85.71%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVAHGDAGFGSK 154
            M+KFVLMVNK GQTR+SSYY+W+P+ ER ALEAE++R+C SR+E QCSF E+RGYK+IYRRYASLFFIVG+   KD+ NELGVLEFIH LVETLDKYF+SVCELDIMFNLEK HFIL+EMV NG I E N+ N+LKP++LM+K A  D+ F SK
Sbjct:   20 MLKFVLMVNKQGQTRLSSYYEWIPMQERCALEAEIIRKCLSRNETQCSFVEYRGYKVIYRRYASLFFIVGM---KDNMNELGVLEFIHALVETLDKYFESVCELDIMFNLEKAHFILEEMVQNGCIFETNKANILKPIMLMEK-ASDDSVFSSK 169          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: A0A7S3GXI4_9STRA (AP complex subunit sigma n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXI4_9STRA)

HSP 1 Score: 223 bits (567), Expect = 2.630e-72
Identity = 104/154 (67.53%), Postives = 130/154 (84.42%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVAHGDAGFGSK 154
            MIKFVLMVNK GQTR++SY+ W PI ERVALEAE++RRC SR+E QCSF E+RG+K++YRRYASLFF+V V  D ++ENEL +LEFIH LVET+DKYF+SVCELDIMF++EK H+I+DEMV+NG I E N+ N+LKPL LMDK+A  + G  S+
Sbjct:    1 MIKFVLMVNKQGQTRLASYFQWYPIQERVALEAEIIRRCLSRTEFQCSFIEYRGFKVVYRRYASLFFVVAV--DGEEENELAILEFIHSLVETMDKYFESVCELDIMFHIEKAHYIVDEMVVNGSIVENNKVNILKPLALMDKLASAEGGIFSR 152          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: A0A2R5GZ26_9STRA (AP complex subunit sigma n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZ26_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.870e-72
Identity = 104/145 (71.72%), Postives = 127/145 (87.59%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVA 145
            MIKFVLMVNK GQTR+SSYY+W+ I ER ALEAE++R+C +R+E QCSF E RGYK++YRRYASLFFIVGV  D+D+ENELG+LEFIHCLVETLDKYF +VCELDIMFNLEK HFIL+EMV NG++ E N+ NVLKP+ ++D ++
Sbjct:    1 MIKFVLMVNKQGQTRLSSYYEWLTIEERGALEAEIIRKCLARTENQCSFMENRGYKVVYRRYASLFFIVGV--DQDEENELGILEFIHCLVETLDKYFSNVCELDIMFNLEKAHFILNEMVQNGHVVEANKANVLKPITMLDSIS 143          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: F0W0A7_9STRA (AP complex subunit sigma n=21 Tax=Oomycota TaxID=4762 RepID=F0W0A7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.930e-70
Identity = 106/143 (74.13%), Postives = 125/143 (87.41%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDK 143
            MIKFVLMVNK GQTR++ YYD++ I ERVALEAE++R+C SR+E QCSF E+RGYK+IYRRYASLFFIVGV  D D ENELG+LEFIH LVET+DKYF+SVCELDIMFNLEK HFILDEMV+NG I E N+ ++LKP+ LM+K
Sbjct:    1 MIKFVLMVNKQGQTRLAQYYDFLSIQERVALEAEIIRKCLSRNENQCSFVEYRGYKVIYRRYASLFFIVGVQND-DSENELGILEFIHALVETMDKYFESVCELDIMFNLEKAHFILDEMVMNGSIVESNKVSILKPIHLMEK 142          
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Match: W7U353_9STRA (AP complex subunit sigma n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U353_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.590e-70
Identity = 106/166 (63.86%), Postives = 128/166 (77.11%), Query Frame = 0
Query:    1 MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFFEFRGYKIIYRRYASLFFIVGVGVDKDD------------ENELGVLEFIHCLVETLDKYFQSVCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVAHGDAGFGSK 154
            MI+F+L VNK GQTR+SSYY WM IPERVALEAE++R+C SRSELQC F E+RG+K+IYRRYASLFFIVGV  D               ENEL +LEFIH LVETLDKYF+SVCELDIMFNLEK HFI+DEMV+NG+I + N+ N+LKP+ LM+K +  +    S+
Sbjct:    1 MIRFILFVNKQGQTRLSSYYTWMSIPERVALEAEIIRKCLSRSELQCQFIEYRGHKVIYRRYASLFFIVGVEGDDATGSAHSVSTNGGCENELAILEFIHALVETLDKYFESVCELDIMFNLEKAHFIVDEMVINGHIVDANKTNILKPIHLMEKASASEESIFSR 166          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig727.17269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPP6_ECTSI3.580e-10395.54AP complex subunit sigma n=1 Tax=Ectocarpus silicu... [more]
A0A835Z9B6_9STRA1.400e-9388.46AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
A0A7S2UUI5_9STRA8.640e-7872.73AP complex subunit sigma n=1 Tax=Fibrocapsa japoni... [more]
F0Y567_AURAN5.560e-7472.92AP complex subunit sigma n=1 Tax=Aureococcus anoph... [more]
A0A7S3ZZG7_9STRA3.100e-7373.61AP complex subunit sigma n=1 Tax=Pelagomonas calce... [more]
A0A7S2FA09_9STRA8.850e-7372.08AP complex subunit sigma n=1 Tax=Florenciella parv... [more]
A0A7S3GXI4_9STRA2.630e-7267.53AP complex subunit sigma n=1 Tax=Spumella elongata... [more]
A0A2R5GZ26_9STRA2.870e-7271.72AP complex subunit sigma n=1 Tax=Hondaea fermental... [more]
F0W0A7_9STRA1.930e-7074.13AP complex subunit sigma n=21 Tax=Oomycota TaxID=4... [more]
W7U353_9STRA8.590e-7063.86AP complex subunit sigma n=2 Tax=Nannochloropsis g... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..154
e-value: 1.3E-50
score: 169.1
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753CLATHRIN COAT ASSEMBLY PROTEINcoord: 1..145
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..144
e-value: 1.3E-41
score: 141.8
NoneNo IPR availableGENE3D3.30.450.60coord: 1..151
e-value: 2.3E-55
score: 188.5
NoneNo IPR availablePANTHERPTHR11753:SF4AP-4 COMPLEX SUBUNIT SIGMA-1coord: 1..145
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 74..86
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig727contigM-pyrifera_M_contig727:30587..31937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig727.17269.1mRNA_M-pyrifera_M_contig727.17269.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig727 30587..31937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig727.17269.1 ID=prot_M-pyrifera_M_contig727.17269.1|Name=mRNA_M-pyrifera_M_contig727.17269.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp
MIKFVLMVNKMGQTRVSSYYDWMPIPERVALEAEVVRRCFSRSELQCSFF
EFRGYKIIYRRYASLFFIVGVGVDKDDENELGVLEFIHCLVETLDKYFQS
VCELDIMFNLEKTHFILDEMVLNGYICEGNRENVLKPLLLMDKVAHGDAG
FGSKSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016635AP_complex_ssu
IPR022775AP_mu_sigma_su
IPR018247EF_Hand_1_Ca_BS
IPR011012Longin-like_dom_sf