prot_M-pyrifera_M_contig72602.17253.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72602.17253.1
Unique Nameprot_M-pyrifera_M_contig72602.17253.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length305
Homology
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BLAST of mRNA_M-pyrifera_M_contig72602.17253.1 vs. uniprot
Match: A0A1R2D3G6_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2D3G6_9CILI)

HSP 1 Score: 59.3 bits (142), Expect = 3.840e-6
Identity = 43/156 (27.56%), Postives = 74/156 (47.44%), Query Frame = 0 
Query:  150 DPDGLLAWNVETSIFASRAQECESRTYLDSPALLREAFSCDWELSRTSRLARAPGAYAQLRDRLLASYPLLRETFRAYALSNPSGDPFDAGYGEMLSLWGEAEIDSLLPQSRRGEASAALELAWLSANYESTPSAFNPSDSLMRHEFLEAITRVAL 305
            +P     W +E S+FA+        TY DS   L + F  DW  ++  R+ +      ++++ +   Y  +R+T+R YA    +G  F      +  L  + EI        R    + ++LA  ++ Y  + S+ + +  L+RHEFLE +TRVAL
Sbjct:  457 EPASSFEWIIEKSMFANY-------TY-DSDETLNDCFEFDWSNTKMVRIIKNDSIRDKIKEIIRPYYKFIRKTYRLYAAIGTNGSIFSINLAILTELCQKCEIFD------RNFKISDVDLALKASKY--SKSSISTAYGLVRHEFLEFLTRVAL 596
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72602.17253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1R2D3G6_9CILI3.840e-627.56Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..87
e-value: 5.7E-10
score: 41.0
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72602contigM-pyrifera_M_contig72602:48..962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72602.17253.1mRNA_M-pyrifera_M_contig72602.17253.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72602 48..962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72602.17253.1 ID=prot_M-pyrifera_M_contig72602.17253.1|Name=mRNA_M-pyrifera_M_contig72602.17253.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp
LTALDLSHNALGPVTGQAIAESLSAAPKSPLRRLFVGFNPLGYESSMAIV
LSLRDHHTLEELGIENTAEEGAIDLAPPRMAQDLWNRARRVNLERHIPAR
VVVEFPPRKRRWDGRADAILDNDEESGESGGSGGMGGGGGSGGGRGSSKD
PDGLLAWNVETSIFASRAQECESRTYLDSPALLREAFSCDWELSRTSRLA
RAPGAYAQLRDRLLASYPLLRETFRAYALSNPSGDPFDAGYGEMLSLWGE
AEIDSLLPQSRRGEASAALELAWLSANYESTPSAFNPSDSLMRHEFLEAI
TRVAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf