prot_M-pyrifera_M_contig72468.17228.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72468.17228.1
Unique Nameprot_M-pyrifera_M_contig72468.17228.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length97
Homology
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BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Match: A0A2E7KDW7_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KDW7_9PLAN)

HSP 1 Score: 192 bits (489), Expect = 1.210e-58
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 
Query:    1 MWSQKMFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
            MWSQKMFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS
Sbjct:    1 MWSQKMFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
[Close]
BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Match: A0A518ADJ8_9PLAN (EF hand n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ADJ8_9PLAN)

HSP 1 Score: 167 bits (423), Expect = 7.770e-49
Identity = 82/92 (89.13%), Postives = 89/92 (96.74%), Query Frame = 0 
Query:    6 MFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
            MFRFVRYF+P VLLVTFS+DL++AQPGGDSRSRGFMSFLDRNRNGVIEPDEF RMP RF+EMLESAGVDTSRSMTAQEYERVMPR++EQMRS
Sbjct:    1 MFRFVRYFIPFVLLVTFSSDLAFAQPGGDSRSRGFMSFLDRNRNGVIEPDEFQRMPSRFREMLESAGVDTSRSMTAQEYERVMPRILEQMRS 92
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BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Match: A0A355G8K2_9PLAN (EF-hand domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G8K2_9PLAN)

HSP 1 Score: 145 bits (367), Expect = 2.340e-40
Identity = 72/95 (75.79%), Postives = 83/95 (87.37%), Query Frame = 0 
Query:    3 SQKMFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
            S+KMFRF    +P VLLV F ADL+YAQPGGDSRSRGFMSFLDRNRNGVIE  EFD+MPGRFKE LE+AGV+TSR M+ QE+ER+MP+VME+MRS
Sbjct:    4 SKKMFRFATLLIPSVLLVGFCADLAYAQPGGDSRSRGFMSFLDRNRNGVIEASEFDQMPGRFKETLEAAGVNTSRDMSQQEFERIMPQVMERMRS 98
[Close]
BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Match: A6CD27_9PLAN (Uncharacterized protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6CD27_9PLAN)

HSP 1 Score: 143 bits (360), Expect = 2.750e-39
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 0 
Query:    3 SQKMFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
            S+KMFRF    +P VLLV F  DL+YAQPGGDSRSRGFMSFLDRN+NGVIE  EFD+MPGRFKE LE+AGV+TSR M+ QE+ER+MP+VME+MRS
Sbjct:    4 SKKMFRFTTLLIPSVLLVGFCTDLAYAQPGGDSRSRGFMSFLDRNKNGVIEASEFDQMPGRFKETLEAAGVNTSRDMSQQEFERIMPQVMERMRS 98
[Close]
BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Match: A0A517RMC0_9PLAN (EF hand n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RMC0_9PLAN)

HSP 1 Score: 130 bits (328), Expect = 9.480e-35
Identity = 64/92 (69.57%), Postives = 78/92 (84.78%), Query Frame = 0 
Query:    6 MFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
            MFRF+      V+LV FSADL+YAQPGG+SR+RGF SF+D+N+NGVIE  EFD+MPGRFKE LE  GVDTSRSMT Q++ERVMP++ME+MRS
Sbjct:    1 MFRFISLLSLSVVLVGFSADLAYAQPGGESRTRGFFSFIDKNKNGVIESSEFDQMPGRFKESLEGVGVDTSRSMTQQDFERVMPKLMERMRS 92
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BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Match: UPI00188549A6 (hypothetical protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=UPI00188549A6)

HSP 1 Score: 113 bits (283), Expect = 4.880e-30
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:   41 MSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
            MSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS
Sbjct:    1 MSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 57
[Close]
BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Match: A0A517VR05_9PLAN (EF hand n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VR05_9PLAN)

HSP 1 Score: 98.2 bits (243), Expect = 1.910e-22
Identity = 48/92 (52.17%), Postives = 72/92 (78.26%), Query Frame = 0 
Query:    6 MFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNGVIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS 97
            MFRF+   +  ++LV    D + AQ   +SR++ FMSF+DRN+NGV+EP EF +MPGR KE LE+AG+DTSRS++ +E+E+++P++ME+MRS
Sbjct:    1 MFRFLSLLLLPLMLVGVKLDQASAQSTDESRTQRFMSFIDRNKNGVMEPAEFAQMPGRLKESLEAAGLDTSRSISQKEFEQILPKLMERMRS 92
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72468.17228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2E7KDW7_9PLAN1.210e-58100.00Uncharacterized protein n=8 Tax=Gimesia TaxID=1649... [more]
A0A518ADJ8_9PLAN7.770e-4989.13EF hand n=3 Tax=Gimesia panareensis TaxID=2527978 ... [more]
A0A355G8K2_9PLAN2.340e-4075.79EF-hand domain-containing protein n=2 Tax=Planctom... [more]
A6CD27_9PLAN2.750e-3973.68Uncharacterized protein n=8 Tax=Planctomycetaceae ... [more]
A0A517RMC0_9PLAN9.480e-3569.57EF hand n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517... [more]
UPI00188549A64.880e-30100.00hypothetical protein n=1 Tax=Gimesia benthica TaxI... [more]
A0A517VR05_9PLAN1.910e-2252.17EF hand n=2 Tax=Gimesia aquarii TaxID=2527964 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 34..96
e-value: 5.3E-6
score: 27.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..97
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.735
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 45..57
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 32..67
score: 8.293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72468contigM-pyrifera_M_contig72468:835..1125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72468.17228.1mRNA_M-pyrifera_M_contig72468.17228.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72468 835..1125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72468.17228.1 ID=prot_M-pyrifera_M_contig72468.17228.1|Name=mRNA_M-pyrifera_M_contig72468.17228.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
MWSQKMFRFVRYFVPVVLLVTFSADLSYAQPGGDSRSRGFMSFLDRNRNG
VIEPDEFDRMPGRFKEMLESAGVDTSRSMTAQEYERVMPRVMEQMRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom