prot_M-pyrifera_M_contig72309.17192.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72309.17192.1
Unique Nameprot_M-pyrifera_M_contig72309.17192.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A2E8LAU7_9ACTN (FmdB family transcriptional regulator n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LAU7_9ACTN)

HSP 1 Score: 131 bits (330), Expect = 1.820e-37
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSKVGISFKGEGFYKNDHGSSSKPSSA 74
            +PTYDYRCERTGEMFELWQSFS+D L+ CPQTH GE++ CGA VKKVFSKVGI+FKG+GFYKNDHGSS K SS+
Sbjct:    1 MPTYDYRCERTGEMFELWQSFSEDTLSICPQTHVGESEVCGAEVKKVFSKVGIAFKGDGFYKNDHGSSGKESSS 74          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A6B1AZQ6_9ACTN (FmdB family transcriptional regulator n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AZQ6_9ACTN)

HSP 1 Score: 127 bits (319), Expect = 9.670e-36
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSKVGISFKGEGFYKNDHGSSSK 70
            +PTYDYRC+RTGEMFELWQSF D+ALT C Q HD E   CGAPVKKVFSKVGISFKGEGFYKNDHGS+++
Sbjct:    1 MPTYDYRCQRTGEMFELWQSFRDEALTVCTQVHDNEGKECGAPVKKVFSKVGISFKGEGFYKNDHGSNAR 70          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A7X5WPY4_9ACTN (CxxC_CXXC_SSSS domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WPY4_9ACTN)

HSP 1 Score: 119 bits (298), Expect = 6.800e-33
Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTH---DGEADACGAPVKKVFSKVGISFKGEGFYKNDHG 66
            +PTYDYRCERTGEMFE+WQSFSD+ LT CP+ H   D   + CGAPVKKVFSKVGI+FKG+GFYKNDHG
Sbjct:    1 MPTYDYRCERTGEMFEIWQSFSDEPLTSCPRAHGSDDNGGETCGAPVKKVFSKVGIAFKGDGFYKNDHG 69          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A354B9N3_9ACTN (FmdB family transcriptional regulator n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B9N3_9ACTN)

HSP 1 Score: 103 bits (258), Expect = 1.270e-26
Identity = 50/73 (68.49%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSKVGISFKGEGFYKNDHGSSSKPSS 73
            +PTYDYRC   GE FE+WQSFS+DALTECP         C   +KKV+SKVGISFKGEGFYKNDHGSS K SS
Sbjct:    1 MPTYDYRCNDCGETFEIWQSFSEDALTECP--------TCEGELKKVYSKVGISFKGEGFYKNDHGSSGKGSS 65          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A3M2H4U1_ACTSX (FmdB family transcriptional regulator n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H4U1_ACTSX)

HSP 1 Score: 93.6 bits (231), Expect = 1.980e-22
Identity = 45/71 (63.38%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAP----VKKVFSKVGISFKGEGFYKNDHGS 67
            +PTY+YRC+R G  FE+WQSFSDDALT CP T  G    C AP    V+KVF  VGI+FKG GFYK DHGS
Sbjct:    1 MPTYEYRCDRCGARFEVWQSFSDDALTTCPAT--GGPPECEAPGEGTVRKVFGNVGITFKGSGFYKTDHGS 69          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A0C1U730_9ACTN (CxxC_CXXC_SSSS domain-containing protein n=1 Tax=marine actinobacterium MedAcidi-G2B TaxID=1550401 RepID=A0A0C1U730_9ACTN)

HSP 1 Score: 91.7 bits (226), Expect = 1.070e-21
Identity = 47/75 (62.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSKVGISFKGEGFYKNDHGSSSKPSSAS 75
            +PTY YRC+     FE  QSF+DDALT+CP        AC   VKKVFS VGISFKG+GFYKNDHGSSSK   AS
Sbjct:    1 MPTYQYRCQTCSHEFEEKQSFADDALTDCP------IGACKGAVKKVFSGVGISFKGDGFYKNDHGSSSKKPGAS 69          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A2E5ZG02_9ACTN (FmdB family transcriptional regulator n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZG02_9ACTN)

HSP 1 Score: 92.0 bits (227), Expect = 1.410e-21
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSKVGISFKGEGFYKNDHGSSSK 70
            +PTY YRC+   + FE+ QSF+D+ LT CP       +ACG PV KVFS VGISFKG+GFYKNDHGSS+K
Sbjct:    1 MPTYQYRCQSCRDEFEVRQSFTDETLTTCPD------EACGGPVSKVFSGVGISFKGDGFYKNDHGSSAK 64          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A358A6A5_9ACTN (FmdB family transcriptional regulator n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A6A5_9ACTN)

HSP 1 Score: 90.1 bits (222), Expect = 3.020e-21
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSKVGISFKGEGFYKN 63
            +PTYDYRC   GE FE+WQSFS+DALTECP         C   +KKV+SKVGISFKG+GFYKN
Sbjct:    1 MPTYDYRCNDCGETFEIWQSFSEDALTECP--------TCEGELKKVYSKVGISFKGDGFYKN 55          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A2E5NTD0_9ACTN (FmdB family transcriptional regulator n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NTD0_9ACTN)

HSP 1 Score: 88.2 bits (217), Expect = 3.230e-20
Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSKVGISFKGEGFYKNDHGSSSKPSSASTPS 78
            +PTY YRC+   + FE+ QSF+D+ALT CP       +AC  PV KVFS VGI+FKG+GFYKNDHG +SK     T S
Sbjct:    1 MPTYQYRCQSCFDEFEVRQSFNDEALTICPD------EACAGPVSKVFSGVGIAFKGDGFYKNDHGPTSKARQTDTAS 72          
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Match: A0A7K2A8G5_9ACTN (Zinc ribbon domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A8G5_9ACTN)

HSP 1 Score: 88.2 bits (217), Expect = 4.560e-20
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    1 VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAP----VKKVFSKVGISFKGEGFYKNDHGSSSK 70
            +P YDYRCER    FE+ QSFSDD LT CP   +G   AC AP    VKKVFS V I+FKG+GFYKNDHG+++K
Sbjct:    1 MPMYDYRCERCSAQFEVRQSFSDDTLTVCPP--EGGPAACFAPGEGPVKKVFSGVAIAFKGDGFYKNDHGANAK 72          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72309.17192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8LAU7_9ACTN1.820e-3779.73FmdB family transcriptional regulator n=1 Tax=Acid... [more]
A0A6B1AZQ6_9ACTN9.670e-3680.00FmdB family transcriptional regulator n=1 Tax=Acid... [more]
A0A7X5WPY4_9ACTN6.800e-3375.36CxxC_CXXC_SSSS domain-containing protein (Fragment... [more]
A0A354B9N3_9ACTN1.270e-2668.49FmdB family transcriptional regulator n=4 Tax=Acid... [more]
A0A3M2H4U1_ACTSX1.980e-2263.38FmdB family transcriptional regulator n=1 Tax=Acti... [more]
A0A0C1U730_9ACTN1.070e-2162.67CxxC_CXXC_SSSS domain-containing protein n=1 Tax=m... [more]
A0A2E5ZG02_9ACTN1.410e-2161.43FmdB family transcriptional regulator n=2 Tax=Acid... [more]
A0A358A6A5_9ACTN3.020e-2165.08FmdB family transcriptional regulator n=1 Tax=Acid... [more]
A0A2E5NTD0_9ACTN3.230e-2055.13FmdB family transcriptional regulator n=1 Tax=Acid... [more]
A0A7K2A8G5_9ACTN4.560e-2060.81Zinc ribbon domain-containing protein n=1 Tax=Acid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013429Putative regulatory protein, FmdB, Zinc ribbon domainSMARTSM00834CxxC_CXXC_SSSS_2coord: 2..49
e-value: 6.3E-7
score: 39.0
IPR013429Putative regulatory protein, FmdB, Zinc ribbon domainTIGRFAMTIGR02605TIGR02605coord: 2..59
e-value: 5.6E-13
score: 46.8
IPR013429Putative regulatory protein, FmdB, Zinc ribbon domainPFAMPF09723Zn-ribbon_8coord: 2..34
e-value: 6.2E-10
score: 39.0
NoneNo IPR availablePANTHERPTHR34404FAMILY NOT NAMEDcoord: 2..83
NoneNo IPR availablePANTHERPTHR34404:SF2coord: 2..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72309contigM-pyrifera_M_contig72309:163..507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72309.17192.1mRNA_M-pyrifera_M_contig72309.17192.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72309 163..507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72309.17192.1 ID=prot_M-pyrifera_M_contig72309.17192.1|Name=mRNA_M-pyrifera_M_contig72309.17192.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
VPTYDYRCERTGEMFELWQSFSDDALTECPQTHDGEADACGAPVKKVFSK
VGISFKGEGFYKNDHGSSSKPSSASTPSDSSSSTGTSTGGSTDSSSSSSS
TSSDTSSSSAAKAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013429Regulatory_FmdB_Zinc_ribbon