prot_M-pyrifera_M_contig7224.17178.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7224.17178.1
Unique Nameprot_M-pyrifera_M_contig7224.17178.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
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BLAST of mRNA_M-pyrifera_M_contig7224.17178.1 vs. uniprot
Match: D8LID6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LID6_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 3.340e-57
Identity = 119/217 (54.84%), Postives = 143/217 (65.90%), Query Frame = 0 
Query:    1 MERCLRGGFSLTSLDISSPLVTAVFVERLVRTIPSLRRLGLRGSLGVGGGSEAVCDKVPRLTALRELDVSHCSWFCDISLRRFAKTLSRGCSSAEAEDQDEPASRGVASFAEQLDERSS--WGAASA-TANTLAFRGHAPMGSLAEELVLVATGWGSXXXXXXXXXXASSSREHLRFRTFTVTCAKTAVTEKGAKAAEALSPGLLVVL-EDHPTARG 213
            +E  LRGG SLTSLD+SSP VTA FV+RL   IPSLRRLGLRGS GV GG + VCD VPRL ALRELD+SHC+WFCD++LRR AK+LS   S A  + +++    G A++ + LDE  +  WGAA A + N LAF GHA  G    +  LV+                S  R   RFRTFTV CA+TAVTEKGAKAAE +SPGL+V+L  D P A G
Sbjct:  251 IEASLRGGVSLTSLDLSSPRVTAGFVKRLTARIPSLRRLGLRGSFGVVGGPDFVCDHVPRLAALRELDLSHCTWFCDLTLRRLAKSLSLRASPAAGDPENQGPHAGSATYLQDLDEAETRGWGAAFAPSTNNLAFAGHAGSGPSGSDADLVS----GASRESGEKELPSLGRSLHRFRTFTVVCARTAVTEKGAKAAELMSPGLMVILVADKPAAAG 463
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7224.17178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LID6_ECTSI3.340e-5754.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..95
e-value: 8.4E-8
score: 33.5
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 9..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7224contigM-pyrifera_M_contig7224:5275..6743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7224.17178.1mRNA_M-pyrifera_M_contig7224.17178.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7224 2074..6925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7224.17178.1 ID=prot_M-pyrifera_M_contig7224.17178.1|Name=mRNA_M-pyrifera_M_contig7224.17178.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MERCLRGGFSLTSLDISSPLVTAVFVERLVRTIPSLRRLGLRGSLGVGGG
SEAVCDKVPRLTALRELDVSHCSWFCDISLRRFAKTLSRGCSSAEAEDQD
EPASRGVASFAEQLDERSSWGAASATANTLAFRGHAPMGSLAEELVLVAT
GWGSGGGGGGEDSKASSSREHLRFRTFTVTCAKTAVTEKGAKAAEALSPG
LLVVLEDHPTARGVLHVMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf