prot_M-pyrifera_M_contig72077.17154.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72077.17154.1
Unique Nameprot_M-pyrifera_M_contig72077.17154.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length36
Homology
BLAST of mRNA_M-pyrifera_M_contig72077.17154.1 vs. uniprot
Match: A0A8J5XEB7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEB7_DIALT)

HSP 1 Score: 47.8 bits (112), Expect = 3.520e-5
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    6 GKSLDKKNQTSSWARRPLNDSQMNYAACDA 35
            G SLDK  QTS WARRPL+ SQ++YAACDA
Sbjct: 1117 GFSLDKAEQTSDWARRPLSVSQLHYAACDA 1146          
BLAST of mRNA_M-pyrifera_M_contig72077.17154.1 vs. uniprot
Match: A0A182GPI4_AEDAL (3'-5' exonuclease domain-containing protein n=3 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GPI4_AEDAL)

HSP 1 Score: 47.4 bits (111), Expect = 4.830e-5
Identity = 22/36 (61.11%), Postives = 25/36 (69.44%), Query Frame = 0
Query:    1 VRSYLGKSLDKKNQTSSWARRPLNDSQMNYAACDAL 36
            VR  LGK LDK NQ S+WA+RPL   Q+ YAA DA 
Sbjct:  578 VRLCLGKKLDKSNQFSNWAQRPLRKEQLRYAALDAF 613          
BLAST of mRNA_M-pyrifera_M_contig72077.17154.1 vs. uniprot
Match: A0A2G4T1B9_RHIZD (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4T1B9_RHIZD)

HSP 1 Score: 47.4 bits (111), Expect = 4.840e-5
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 VRSYLGKSLDKKNQTSSWARRPLNDSQMNYAACDA 35
            V +YLG +L+K+ Q S+W +RPL ++Q+ YAACDA
Sbjct:  708 VATYLGYTLNKRQQISNWEKRPLTEAQVTYAACDA 742          
BLAST of mRNA_M-pyrifera_M_contig72077.17154.1 vs. uniprot
Match: MUT7_AEDAE (Exonuclease mut-7 homolog n=2 Tax=Aedes aegypti TaxID=7159 RepID=MUT7_AEDAE)

HSP 1 Score: 47.4 bits (111), Expect = 4.840e-5
Identity = 22/36 (61.11%), Postives = 25/36 (69.44%), Query Frame = 0
Query:    1 VRSYLGKSLDKKNQTSSWARRPLNDSQMNYAACDAL 36
            VR  LGK LDK NQ S+WA+RPL   Q+ YAA DA 
Sbjct:  580 VRLCLGKKLDKSNQFSNWAQRPLRKEQLRYAALDAF 615          
BLAST of mRNA_M-pyrifera_M_contig72077.17154.1 vs. uniprot
Match: A0A0P1A7P7_PLAHL (3\-5\ exonuclease family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7P7_PLAHL)

HSP 1 Score: 47.4 bits (111), Expect = 4.870e-5
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0
Query:    4 YLGKSLDKKNQTSSWARRPLNDSQMNYAACDAL 36
            YL + L KK Q S+WARRPL  SQ++YAA DAL
Sbjct:  166 YLNRKLAKKQQMSNWARRPLTQSQLHYAAADAL 198          
BLAST of mRNA_M-pyrifera_M_contig72077.17154.1 vs. uniprot
Match: A0A6L5CUQ0_9INSE (3'-5' exonuclease domain-containing protein (Fragment) n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CUQ0_9INSE)

HSP 1 Score: 47.0 bits (110), Expect = 6.630e-5
Identity = 22/32 (68.75%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    5 LGKSLDKKNQTSSWARRPLNDSQMNYAACDAL 36
            LGKSL+K NQ S+W RRPL DSQ  YAA DA 
Sbjct:  556 LGKSLNKDNQFSNWERRPLRDSQKQYAALDAF 587          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72077.17154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A8J5XEB7_DIALT3.520e-573.33Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A182GPI4_AEDAL4.830e-561.113'-5' exonuclease domain-containing protein n=3 Ta... [more]
A0A2G4T1B9_RHIZD4.840e-554.293'-5' exonuclease domain-containing protein n=1 Ta... [more]
MUT7_AEDAE4.840e-561.11Exonuclease mut-7 homolog n=2 Tax=Aedes aegypti Ta... [more]
A0A0P1A7P7_PLAHL4.870e-563.643\-5\ exonuclease family protein n=1 Tax=Plasmopar... [more]
A0A6L5CUQ0_9INSE6.630e-568.753'-5' exonuclease domain-containing protein (Fragm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 1..35
e-value: 1.1E-6
score: 28.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..36
e-value: 3.5E-11
score: 44.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72077contigM-pyrifera_M_contig72077:848..955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72077.17154.1mRNA_M-pyrifera_M_contig72077.17154.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72077 848..955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72077.17154.1 ID=prot_M-pyrifera_M_contig72077.17154.1|Name=mRNA_M-pyrifera_M_contig72077.17154.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=36bp
VRSYLGKSLDKKNQTSSWARRPLNDSQMNYAACDAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf