prot_M-pyrifera_M_contig7180.17107.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7180.17107.1
Unique Nameprot_M-pyrifera_M_contig7180.17107.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length729
Homology
BLAST of mRNA_M-pyrifera_M_contig7180.17107.1 vs. uniprot
Match: A0A6H5J6J5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6J5_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.400e-19
Identity = 113/264 (42.80%), Postives = 143/264 (54.17%), Query Frame = 0
Query:    1 MRVGDWRAVLDELEVAEQAADADPTLAGMTFFMYGSCLGRMAKGRRWKEALEILERMRARGMQPDSFCLSAAMKACGACKKWEEALALLELXXXXXXXXXXXXXXXXXXXXXXXNAGQTGKAXELXE-EIKAGNQTPHSHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----EILPKG-----AGLGLESLNMASYACGREGNWEACVALLGEMRAVGIAPDNASYAAAIK 254
            MR  DWR VL EL++AE+A+DA P+ + +T FMY SC+ RMAK RRW+EAL+IL+RMRARG+QP+S+C+S+A                                XXXXXXXXXX        X  X  E+K G +TPH   XXXXXXXXXXXXXXXXXXXXXXX                                         ++LP       A L L++L  AS+ACGR G+W+A + LL EMRAV I P++  Y AA++
Sbjct:   52 MRPTDWRGVLRELQIAEEASDAQPSESRITTFMYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSSAXXXXXXXXXXXXXXXXXXXRREDLGEGSPVDEXXXXXXXXXXXXXXXXXXXXXXXXELKVGGKTPHPFXXXXXXXXXXXXXXXXXXXXXXXXMRQARVRTDGFIDVYCVKTTITALAKSGKWKQALKIYLEMLDVLPANSDSPEANLNLDALRDASFACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQ 315          
BLAST of mRNA_M-pyrifera_M_contig7180.17107.1 vs. uniprot
Match: D7G0M5_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M5_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.510e-10
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    1 MRVGDWRAVLDELEVAEQAA------DADPTLAGMTFFMYGSCLGRMAKGRRWKEALEILERMRARGMQPDSFCLSAAMKACGACKKWEEALALL 89
            +R  DWR +L EL+ AE A       +A    A ++ F+Y  C+ RMAK  RW EAL+IL RM   G  P+S+C++AA+ ACG   + +EAL L+
Sbjct:   88 VRKDDWRRILVELDKAELAEGRATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLM 182          
BLAST of mRNA_M-pyrifera_M_contig7180.17107.1 vs. uniprot
Match: D7G1L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L0_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.940e-7
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    6 WRAVLDELEVAEQA----ADADPTLAG-----MTFFMYGSCLGRMAKGRRWKEALEILERMRARGMQPDSFCLSAAMKACGA 78
            WR V+ ELE AE A     +A+    G     ++   Y SCL  +AK  RW+EAL + ERM ARG+ P+SFCL+A ++AC A
Sbjct:  126 WRGVMRELEEAETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTA 207          
BLAST of mRNA_M-pyrifera_M_contig7180.17107.1 vs. uniprot
Match: A0A6H5K890_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K890_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 7.970e-5
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 0
Query:   34 YGSCLGRMAKGRRWKEALEILERMRARGMQPDSFCLSAAMKACGA 78
            Y SCL  +AK  RW+EAL + ERM ARG+ P+SFCL+A ++AC A
Sbjct:  142 YNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTA 186          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7180.17107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J6J5_9PHAE1.400e-1942.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G0M5_ECTSI1.510e-1043.16PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
D7G1L0_ECTSI1.940e-745.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K890_9PHAE7.970e-557.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 318..350
e-value: 5.6E-9
score: 33.6
coord: 220..245
e-value: 7.1E-4
score: 17.6
coord: 139..172
e-value: 6.7E-7
score: 27.1
coord: 457..490
e-value: 1.7E-5
score: 22.7
coord: 283..316
e-value: 5.2E-4
score: 18.0
coord: 422..456
e-value: 3.4E-8
score: 31.2
coord: 602..635
e-value: 7.3E-4
score: 17.5
coord: 33..66
e-value: 2.1E-5
score: 22.4
coord: 388..420
e-value: 3.3E-4
score: 18.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 420..466
e-value: 4.0E-11
score: 42.9
coord: 281..327
e-value: 6.8E-11
score: 42.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 339..397
e-value: 5.1E-4
score: 20.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 140..169
e-value: 6.4E-6
score: 26.1
coord: 107..130
e-value: 0.52
score: 10.7
coord: 220..242
e-value: 0.28
score: 11.5
coord: 180..201
e-value: 0.054
score: 13.8
coord: 248..277
e-value: 0.87
score: 10.0
coord: 33..61
e-value: 0.03
score: 14.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 8.265
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..279
score: 9.646
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..171
score: 10.457
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 490..520
score: 6.599
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 30..64
score: 10.063
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 280..314
score: 10.139
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 65..95
score: 6.84
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 315..349
score: 13.055
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 8.353
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 669..703
score: 8.78
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 350..384
score: 7.717
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 455..489
score: 10.808
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 420..454
score: 12.847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 561..598
score: 6.697
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 526..560
score: 9.778
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 599..633
score: 10.896
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 385..419
score: 9.799
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 634..668
score: 9.887
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..202
score: 7.651
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 525..713
e-value: 1.2E-11
score: 44.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 98..205
e-value: 6.1E-22
score: 80.5
coord: 403..522
e-value: 9.6E-33
score: 116.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 526..725
e-value: 1.1E-41
score: 145.2
coord: 206..374
e-value: 3.7E-41
score: 143.5
coord: 4..97
e-value: 8.6E-12
score: 47.0
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 38..200
coord: 329..447
coord: 220..378
coord: 434..573
coord: 580..706

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7180contigM-pyrifera_M_contig7180:4627..6813 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7180.17107.1mRNA_M-pyrifera_M_contig7180.17107.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7180 4627..6813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7180.17107.1 ID=prot_M-pyrifera_M_contig7180.17107.1|Name=mRNA_M-pyrifera_M_contig7180.17107.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=729bp
MRVGDWRAVLDELEVAEQAADADPTLAGMTFFMYGSCLGRMAKGRRWKEA
LEILERMRARGMQPDSFCLSAAMKACGACKKWEEALALLELERERAGKGR
VDNYCMSAAIYACGNAGQTGKALELLEEIKAGNQTPHSHSYTAAISSCGD
AMMWQEALKLFEEMRDSGVTMDAYCVKTTISALGRSGQWKPALKVYLEMK
EILPKGAGLGLESLNMASYACGREGNWEACVALLGEMRAVGIAPDNASYA
AAIKACGDHQQGEKALGLLTEMADAGVQPELATYNTAMWAAGGTSRWAEA
VELLSEMKSNGVQPDAKTYSSVITACGKDGHWEEAVAMLSDMREQGVTPN
KLHYKAAILSCGAAKQWGRAVGLIGEMRGEGGEPDVSTYNAAIVACVSAK
RGAEAVALLREMQTDGAKANVVTYNQVITACGKAGKWEQAVALLREMGEE
GPSPDTVSYTAAIASCGMSKRSEQALELLAEMPAAGIEPNMFNFNSALVA
CSKSGAGQAAADLLRSMTASSPGKPNEASYVAALSACATGGQSDLAMELF
EELRADGIEATPGLYAAAIRACGNGQGGSHWQRAAGLMEEMQAGGMRANV
RTHNEVMKAAYRAGRWDEVVAHMDEMKRLGVKPDVFSYNWVLSARRDQGR
WEDTLRVVEEMQEFGLVRTAFSFAVAVRACGAAGQWEKACGLLEELRAAG
VDVKPQMVEEIAAEFAALEGAERALGLLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf