prot_M-pyrifera_M_contig718.17105.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig718.17105.1
Unique Nameprot_M-pyrifera_M_contig718.17105.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length404
Homology
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: D7G075_ECTSI (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G075_ECTSI)

HSP 1 Score: 792 bits (2045), Expect = 1.720e-288
Identity = 392/403 (97.27%), Postives = 394/403 (97.77%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSTGPSQPDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQ   VPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQ PIRKYPNGTQDKIVGKVRASEFPRG +DPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGS GP   DFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEE+GSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG
Sbjct:    9 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQ---VPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGS-GPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 407          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A835Z565_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z565_9STRA)

HSP 1 Score: 595 bits (1535), Expect = 6.500e-201
Identity = 292/407 (71.74%), Postives = 337/407 (82.80%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKV---RASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSTG-PSQPDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            +GT ALN +ER+DGLLY LV+PQKPM  TRV+DL+HFD+   VP GQN+ IAVMSYSGYDIEDA VLN+GS+DRGFGRCMVFRKHQV ++ +P+GT D I G      A  +P+G  D  W +YKALD+DGI  VGA+L+  T+++NK +P  T  S    +        LSYK  + SYVDKV++ +NE E+   K+L+RQ RRPEVGDKFSSRHGQKGVCGIIVPQ DMPF++ GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVLHGHQAYGTAFGEE+G+AD+V   CQALV+RG+SY GKD+L SG  GEP++NYIFAGPVFYQKLKHMVMDKMHARARGPRA LTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTA VC+GCGLLG
Sbjct:  734 IGTIALNQYERIDGLLYTLVYPQKPMCKTRVIDLIHFDE---VPAGQNSIIAVMSYSGYDIEDASVLNKGSIDRGFGRCMVFRKHQVALKTHPSGTSDSINGPPDPNNADLYPKGENDRGWKKYKALDKDGIAYVGAKLEKDTVIINKMTPVGTDISADRAAATKMREASLSYKTSSPSYVDKVMIASNEVENQFFKVLVRQVRRPEVGDKFSSRHGQKGVCGIIVPQADMPFSEMGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLHGHQAYGTAFGEEFGNADKVTDICQALVDRGFSYCGKDILMSGINGEPVLNYIFAGPVFYQKLKHMVMDKMHARARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTAYVCEGCGLLG 1137          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A7S3H3I2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3I2_9STRA)

HSP 1 Score: 585 bits (1509), Expect = 1.060e-198
Identity = 281/408 (68.87%), Postives = 338/408 (82.84%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTS-----GSTGPSQPDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            +GTTA+N +ER D LLYA+++PQKPMV +R LDL++FDQ   +PGGQNAS+AVMSYSGYDIEDAIVLNRGS+DRGFGRC+V +K    +++YPNG+ D+  G V A +FP GAED R+ + + LD DGIC+VG  L+P  ++VNK SP++       G   P   ++  T L+YK    + VDKV++T+NENE+++IK+L+RQ RRPEVGDKFSSRHGQKGVCG+I+ QEDMPF++ GICPDLIMNPHGFPSRMTVGKM+ELV+GKA V  G Q YG+AFGEE+G+ADRV + C  LV+ GYSYVGKD+LTSG  GEPL +Y+F GPVFYQKLKHMVMDKMHARA+GPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LIMERLMISSDAFTANVC+ CGLLG
Sbjct:  590 IGTTAINQYERFDTLLYAMIYPQKPMVKSRTLDLINFDQ---LPGGQNASLAVMSYSGYDIEDAIVLNRGSMDRGFGRCLVAKKFVTTLKRYPNGSSDRSTGPVAADQFPGGAEDARFKKQEFLDPDGICQVGQVLEPNFVLVNKFSPSNQGDLMDGGGFNPVASEYKPTKLTYKGSGPATVDKVLITSNENENFIIKVLMRQVRRPEVGDKFSSRHGQKGVCGLILNQEDMPFSERGICPDLIMNPHGFPSRMTVGKMIELVSGKAAVFEGRQGYGSAFGEEFGNADRVEVSCATLVKHGYSYVGKDILTSGITGEPLESYVFMGPVFYQKLKHMVMDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLIMERLMISSDAFTANVCENCGLLG 994          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC)

HSP 1 Score: 577 bits (1487), Expect = 1.470e-193
Identity = 288/425 (67.76%), Postives = 336/425 (79.06%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEF--------PRGAE-----------DPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSG---STGPSQPDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            MGT ALN +ER+D LLYA+V+PQKP+VTTR LDLV+F++   +PGGQNA +AVMSYSGYDIEDA+VLN+ SLDRGFGRC++ RKHQ  +RKY NG  D + G    +          P  A+           DPR  R++ALD+DGIC+VG RL  G++M+NK SP S +     +G     F  TPLSYK PA S+VD+V++T+NE  D L+K+ +RQ RRPEVGDKFSSRHGQKGVCGIIV QEDMPF D GICPDLIMNPHGFPSRMTVGK++E VAGKA V+ G QAYGTAFGE++GSADRV  C  ALVE G+SYVGK+++TSGT GEPL+ YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS+L+ ERLMISSDAFTA VC+ CGLLG
Sbjct:  732 MGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNE---LPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLG 1153          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A7S2YIK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YIK7_9STRA)

HSP 1 Score: 552 bits (1423), Expect = 2.500e-192
Identity = 270/416 (64.90%), Postives = 320/416 (76.92%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSTGPSQPDFAS--------------TPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLL 402
            MG  A+N +ERMDGL+Y LV+P KPMV +R LDLV+FD   ++PGGQNA +AVMSYSGYDIEDAI+LN+ S+DRGFGRCMV RKHQ  +R+Y NGT D+  G    S F  G  D R+ RYKA+D+DGICRVG  L+ G+IMVNK SP  T+ + G ++  F +               PL YK+ A SYVDKVV+T+NENE +L+K+++RQ RRPE+GDKF+SRHGQKGVCG+IVP++D+PF + G  PDLIMNPHGFPSRMTVGK++EL+ GKA V  G Q Y TAFGEE+GSAD      +AL+  G +Y GKD   SGT GE L  YIF+GPVFYQKLKHMV+DK HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YGAS LIMERLM SSDAF+ANVC  CGLL
Sbjct:   91 MGCIAMNEYERMDGLIYTLVYPHKPMVKSRTLDLVNFD---KIPGGQNACMAVMSYSGYDIEDAIILNKASIDRGFGRCMVLRKHQTSVRRYANGTMDQTTGPPDPSSFQDGENDKRFQRYKAVDDDGICRVGELLENGSIMVNKQSPTDTTSNLGGAEFGFGTQGQAALARQVQYKHAPLPYKSSAPSYVDKVVITSNENEQFLVKVMVRQVRRPEIGDKFASRHGQKGVCGLIVPEQDLPFNEYGHAPDLIMNPHGFPSRMTVGKLLELLVGKAAVFEGRQGYSTAFGEEFGSADTAEAASEALIRNGLNYTGKDTFYSGTNGEALDGYIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMERLMHSSDAFSANVCMTCGLL 503          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A6U4JF41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JF41_9STRA)

HSP 1 Score: 568 bits (1463), Expect = 1.490e-190
Identity = 279/405 (68.89%), Postives = 333/405 (82.22%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGS---TGPSQPDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLL 402
            MGT A+N +ER+D LLYA+V+PQKPMVTTRVLDL++F+Q   VPGGQNA +AVMSYSGYDIEDA+V+N+GS+DRG+GRC+V +K Q  IR+Y NG+ D+ VG    ++  R   D R+ ++ ALDEDG+  VG +++PG I++NK SP  TS      G S  ++  TP+++K+ A   VDKV++T+NENE +LIK+ LRQ RRPEVGDKFSSRHGQKGVCGIIVPQEDMPF + GICPDLIMNPHGFPSRMTVGKM+EL+ GKAGVL G QAYGTAFGE++G+ADRV    + LV  G+SY GKD+LTSGT GE + +YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LIMERLM+SSD FTA VC+ CGLL
Sbjct:  700 MGTVAMNQYERIDTLLYAMVYPQKPMVTTRVLDLINFNQ---VPGGQNACVAVMSYSGYDIEDAVVINKGSIDRGYGRCLVLKKAQASIRRYANGSLDRTVGPPPMTDESR-KNDKRYRKFLALDEDGLPHVGEKVEPGQILINKESPLRTSDPGILEGGSVTEYKPTPVTWKSSASVNVDKVMITSNENEQFLIKVNLRQCRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFNNDGICPDLIMNPHGFPSRMTVGKMIELLTGKAGVLRGRQAYGTAFGEDFGNADRVQFASEELVRHGFSYYGKDILTSGTSGEQICSYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLIMERLMLSSDQFTATVCEKCGLL 1100          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A7S2WH87_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH87_9STRA)

HSP 1 Score: 565 bits (1455), Expect = 2.870e-189
Identity = 277/416 (66.59%), Postives = 328/416 (78.85%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNK-----------HSPASTSGSTGPSQPDFASTPLSYKAPAES--YVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            MGT A+N +E M+ L+Y+LV+P KPMV TRVLDL++FD   +VPGGQNA++AVMSYS YDIEDAI+LN+ SLDRGFGRC+V RKHQ  +R+YPNG  D + G     EF RG +D RW RY  LD+DG+C VG +L+PG +MVNK           H P       G  +P     PLSYK   +   YVDKV++T NE E  LIK+L+RQ RRPE+GDKFSSRHGQKGVCG+IV QE+MPF+D GICPDLIMNPHGFPSRMTVGK++ELV GKAG+L+G Q YGTAFGE++G+ADRV  C + LV+RG+SYV KD LTSG  GEP+  YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCL+GYG++ALI ERLM SSDAF+A+VC+ CG+LG
Sbjct:  697 MGTVAMNQYELMNSLIYSLVYPHKPMVKTRVLDLINFD---KVPGGQNATLAVMSYSAYDIEDAIILNKASLDRGFGRCLVLRKHQTSLRRYPNGATDHLKGPPNPEEFHRGRQDTRWQRYAKLDQDGLCEVGEKLEPGQVMVNKVMPTNVNDNLDHPPTMGGAVMGAEKP----APLSYKGSVDHHVYVDKVLMTRNETEHCLIKVLVRQCRRPELGDKFSSRHGQKGVCGLIVNQENMPFSDFGICPDLIMNPHGFPSRMTVGKIIELVVGKAGILNGLQGYGTAFGEDFGNADRVVECSKELVKRGFSYVAKDYLTSGITGEPMKAYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLVGYGSAALISERLMTSSDAFSAHVCRKCGILG 1105          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A7S2DCI5_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCI5_9STRA)

HSP 1 Score: 557 bits (1436), Expect = 6.710e-188
Identity = 279/417 (66.91%), Postives = 332/417 (79.62%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSP----------ASTSGSTGPSQPDFASTPLSYKAPAESYV--DKVVLTANENED--YLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            MG  A+N +E M  L+Y+LV+P KPMV TRVLDLV+FD   +VPGGQNA +AVMSYSGYDIEDAI+LN+ S+DRGFGRC++ RKHQ  +++YPNG+QD   G      F RGAE+ ++ R+  LD+DG+C VG RLDPG IMVNK  P          ++TSG+TG  +P     PLSYKAP + +V  DKV++T NE +    LIK+LLRQ RRPEVGDKF+SRHGQKGVCG+IV QE++PF ++GICPDLIMNPHGFPSRMTVGK++ELV GKAGV++GHQ Y TAFGE++G+AD+V    Q LV  G+SYV KDMLTSG  GEPL  YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCL+GYGA+ALI ERLM SSDAFTA+VC+ C L+G
Sbjct:  568 MGCVAMNQYEIMSSLIYSLVYPMKPMVKTRVLDLVNFD---KVPGGQNAVLAVMSYSGYDIEDAIILNKASIDRGFGRCLIMRKHQTSLKRYPNGSQDINEGPPPVEAFARGAENAKYARFSKLDKDGMCLVGERLDPGQIMVNKRIPTNVSMDLSVASATSGTTGTHKP----APLSYKAPHDHFVHVDKVLVTRNETDHAHLLIKVLLRQCRRPEVGDKFASRHGQKGVCGLIVNQENLPFNETGICPDLIMNPHGFPSRMTVGKIIELVVGKAGVMNGHQGYATAFGEDFGNADKVVEASQELVRHGFSYVAKDMLTSGITGEPLSAYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLVGYGAAALISERLMTSSDAFTAHVCKKCNLIG 977          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A024TUJ8_9STRA (DNA-directed RNA polymerase subunit beta n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TUJ8_9STRA)

HSP 1 Score: 556 bits (1434), Expect = 6.700e-186
Identity = 277/407 (68.06%), Postives = 328/407 (80.59%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGK--VRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSTGPSQPD--FASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            +GT  +N  ER+D LLY +V+PQ PMV TRVLDLV+FDQ   VP GQNA++AVMSYSGYDIEDAIVLN+ SLDRGFGRCMVF+K+Q  +++YPN T D+IVG      S F       R  RY +LD DGICRVG ++  G IMVNK SPA+   S      D  ++ +P+SYK     Y+DKV+LT++E++ +LIK+L+RQTRRPE+GDKFSSRHGQKGVCG I  QEDMPF D G+CPDLIMNPHGFPSRMTVGKM+ELVAGKAGVL G +A+GTAFGE+YG+ADRV  C + LV  G++Y GKD LTSG  GEP++ YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM+SSDAFTANVCQGC +LG
Sbjct:  734 IGTIGMNQFERIDTLLYTMVYPQAPMVKTRVLDLVNFDQ---VPAGQNATVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTVVKRYPNNTYDRIVGPPDFEGSSF-------RNQRYASLDADGICRVGGQVVSGGIMVNKESPANVDISITSEVQDVSYSPSPVSYKNATPGYIDKVMLTSSESDQFLIKVLVRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDLGMCPDLIMNPHGFPSRMTVGKMIELVAGKAGVLSGRRAFGTAFGEDYGTADRVLDCSKELVSHGFNYAGKDYLTSGVTGEPILCYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGASMLLLERLMLSSDAFTANVCQGCQMLG 1130          
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Match: A0A2P4YIY6_9STRA (DNA-directed RNA polymerase subunit beta (Fragment) n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4YIY6_9STRA)

HSP 1 Score: 544 bits (1401), Expect = 6.130e-185
Identity = 272/409 (66.50%), Postives = 320/409 (78.24%), Query Frame = 0
Query:    1 MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGAEDP---RWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSTGPSQP---DFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLG 403
            +GT A+N  ER+D LLY +V+PQ PMV TRVLDLV+FD   RVP GQNA +AVMSYSGYDIEDAIVLN+ SLDRGFGRCMVF+K+Q  I+KY NG+ D+IVG                 R  +Y +LD DGI RVG  +  G IM+NK  P   + S     P    ++ +P +YK P ++YVDKV+LT++E   +L+K+L+RQTRRPE+GDKFSSRHGQKGVCG I  QEDMPF D GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVL G +AYGTAFGE+YGSAD V  C + LV+ G++Y GKD LTSG  GE +  YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS L+MERLM+SSDAF+A+VCQGC +LG
Sbjct:  391 IGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFD---RVPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPDFDSLAASGGAGVGFRNAKYSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIQAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEAIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLG 796          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig718.17105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G075_ECTSI1.720e-28897.27DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A835Z565_9STRA6.500e-20171.74DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A7S3H3I2_9STRA1.060e-19868.87DNA-directed RNA polymerase subunit beta n=1 Tax=S... [more]
I2CNY0_NANGC1.470e-19367.76DNA-directed RNA polymerase subunit beta n=3 Tax=M... [more]
A0A7S2YIK7_9STRA2.500e-19264.90DNA-directed RNA polymerase n=1 Tax=Amphiprora pal... [more]
A0A6U4JF41_9STRA1.490e-19068.89DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A7S2WH87_9STRA2.870e-18966.59DNA-directed RNA polymerase subunit beta n=1 Tax=R... [more]
A0A7S2DCI5_9STRA6.710e-18866.91DNA-directed RNA polymerase subunit beta n=1 Tax=D... [more]
A0A024TUJ8_9STRA6.700e-18668.06DNA-directed RNA polymerase subunit beta n=12 Tax=... [more]
A0A2P4YIY6_9STRA6.130e-18566.50DNA-directed RNA polymerase subunit beta (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 1..343
e-value: 2.1E-124
score: 417.3
NoneNo IPR availableGENE3D3.90.1800.10coord: 345..403
e-value: 3.6E-24
score: 87.4
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 1..402
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 1..357
e-value: 1.7E-109
score: 366.5
IPR014724RNA polymerase Rpb2, OB-foldGENE3D2.40.50.150coord: 6..201
e-value: 2.1E-124
score: 417.3
IPR007641RNA polymerase Rpb2, domain 7PFAMPF04560RNA_pol_Rpb2_7coord: 359..402
e-value: 3.8E-16
score: 59.3
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 1..402
IPR007121RNA polymerase, beta subunit, conserved sitePROSITEPS01166RNA_POL_BETAcoord: 205..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig718contigM-pyrifera_M_contig718:21180..33820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig718.17105.1mRNA_M-pyrifera_M_contig718.17105.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig718 21177..33820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig718.17105.1 ID=prot_M-pyrifera_M_contig718.17105.1|Name=mRNA_M-pyrifera_M_contig718.17105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=404bp
MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQASRVPGGQNAS
IAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKI
VGKVRASEFPRGAEDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPAS
TSGSTGPSQPDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTR
RPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMT
VGKMVELVAGKAGVLHGHQAYGTAFGEEYGSADRVHLCCQALVERGYSYV
GKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQ
PTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCG
LLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR007120DNA-dir_RNAP_su2_dom
IPR014724RNA_pol_RPB2_OB-fold
IPR007641RNA_pol_Rpb2_7
IPR015712DNA-dir_RNA_pol_su2
IPR007121RNA_pol_bsu_CS