prot_M-pyrifera_M_contig7129.17002.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7129.17002.1
Unique Nameprot_M-pyrifera_M_contig7129.17002.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length882
Homology
BLAST of mRNA_M-pyrifera_M_contig7129.17002.1 vs. uniprot
Match: D7FVE2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE2_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 3.110e-160
Identity = 381/830 (45.90%), Postives = 453/830 (54.58%), Query Frame = 0
Query:   55 LPEGFAAALMAPSDP-PTANSTHPHTGGGSEQSAVTCGGLQKLELYHNRIDFVHPRALEGLMSLTYLDLGRNQLRXXXXXXXXXXXXXXXXXXXXXLLREPPSPLCLPLLSELWLSGNQIAGMGAWAYGPPQQQQTRPFSIDERGRQRQTCSENKSSLEKSQGGVPVELGLEGCPKRQDPRNGGRNPGSALEEPRRGANFGCGFEERGARGGEASTFAQGRTDADDESFVWLPTLDVLHLQDNCLESLGGRWSLAGCPLLRSFDASFNRLRTPDEIVACLQACGDVREVRLHDNPASTCHNYADTIALSCPRLVRMDGVGVDTAV-HWRAAAKTYGRRADAVLPFLLLDATEPSGSSGPPVVTADSLPPTGKPDLTTGEPSASCLGVNELQ--QQCPWCGIAVLSTTXXXXXXXXNSGIGKFSLQVPRGGSTTDEPGPAGGRDAATSCREGELAIPNSTISIGDSGARRXXXXXXHTCASCGGELPDTDLWYVKESRDSRCSLRWDQVLSEGRRWRTDFSGGGASAGDSVAADGDGTIVSDAFRRVCLTGRDERASMRRRHRREERGVASGEDLAGAQTQTETVEGGGERSSVQSGSITTEQAVTKVQSAFRGFHVRRALQAALDSARYVDEEVEGLLRVNGGARFELNAFLVPPPELADGWWGDRDSTAAAPADSNNATLNGNLSGRARATDTRLVDTARFVSSKSPSSERARESQERGLRDGIDALGQQAEDAAATAATAPADPT--LEYTV--VNQGKGTQDSGGARYERQTVGVGKSRDIGGGVGDGGAVAGAEEGLATAWGLSDPMVARAMMKRAKRLRKFQTAE 876
            LPEGFAA LM P+DP P    T P       + AV CGGLQKLELYHNR+  ++PRAL+GL SLT+L        XXXXXXXXXXXXXXXXXXXX LLREPPSPLCLPLL+ELWLSGNQI  MG+WA  P +   TR  S+ ER  + +   E   +L +  G  P +L     P  Q  ++    P        +G     G +E   RG    T+        D++ VWLP+L+VLHLQDN LE+LGGR+SLAGCPLLRSFDASFN+LR PDEI   L+AC  + EVRLHDNPAS C NYAD I LSCP L +MDGV +D  V HWRA A  YGRRAD VLPFLL          G    T     PT   + TTG   +      E      CPWCG+  L           +  +    + V       DE   A G D A+        IP        SG          TC SCG ELP  DLW V ESR +R  + W  V S G RWR  F    A   D++    +     D+FR+ CL GR ER  MRRRHRREER VA+G  +   +T          R  V +     E+AVTK+QSAFRGFHVRRALQAALDSA+YVD+E+EGLL +NGG RFEL+ FL PPPEL DGW G    T A    + N   +     RA+AT  R +DTAR   S +P     R    RG  DG++A  +   D+  T  T  A  +  L  TV  V  G+ + D   A       G   +RD     G GG    A+  LA  WGL+DP  ARA  KRAKRLRKFQ  E
Sbjct:  493 LPEGFAAGLMQPTDPIPAQTETCPTV----VERAVACGGLQKLELYHNRLASINPRALQGLASLTHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLREPPSPLCLPLLNELWLSGNQIRSMGSWASSPTE---TRLDSLPERWTKHRAILEG--ALLELSGDSPQQL--RASPGDQHLKH---TPFLGRVSEGQGRESEYGKQETSTRGEHGRTY--------DDATVWLPSLEVLHLQDNALETLGGRFSLAGCPLLRSFDASFNQLRAPDEISLSLEACSGLEEVRLHDNPASACPNYADAITLSCPHLTQMDGVHLDAQVQHWRAGANAYGRRADLVLPFLLETGETSEARRGAAAAT-----PTTARNETTGNDVSESKASKEASVGDYCPWCGVCTLRAKHANDTVEESDAVNVAEVIVRGRDGARDE---ASGLDPASGTTNLPQHIPGCVEGGRSSGPS--------TCVSCGFELPSADLWSVSESRAARSFVSWQDVCSAGGRWRDGFC---ADVRDTIGMGQEEMSERDSFRKACLQGRVEREKMRRRHRREERNVATGAGVNEERTAQLVASSPSVRQDVGTTWPANEKAVTKLQSAFRGFHVRRALQAALDSAKYVDDELEGLLNINGGDRFELDRFLSPPPELGDGWLG----TTAVAQGNKNIPRHLTPPSRAKATSIRAIDTARAAVSNTP-----RRPHPRG-GDGVEATSRTRLDSYCTGGTGHATKSTILSETVQAVQTGR-SDDRETAERTTSDEGSASARDKAS-EGGGGPERRAKSDLARDWGLTDPRAARAFAKRAKRLRKFQNGE 1269          
BLAST of mRNA_M-pyrifera_M_contig7129.17002.1 vs. uniprot
Match: A0A6H5JF94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF94_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 3.520e-141
Identity = 390/1002 (38.92%), Postives = 475/1002 (47.41%), Query Frame = 0
Query:   55 LPEGFAAALMAPSDP-PTANSTHPHTGGGSEQSAVTCGGLQKLELYHNRIDFVHPRALEGLMSLTYLDLGRNQLRXXXXXXXXXXXXXXXXXXXXXLLREPPSPLCLPLLSELWLSGNQIAGMGAWAYGPPQQQQTRPFSIDERGRQRQTCSENKSSLEKSQGGVPVELGLEGCPKRQDPRNGGRNPGSALEEPRRGANFGCGFEERGARGGEASTFAQGRTDADDESFVWLPTLDVLHLQDNCLESLGGRWSLAGCPLLRSFDASFNRLRTPDEIVACLQACGDVREVRLHDNPASTCHNYADTIALSCP-------------------------------------------------RLVRMDGVGVDTAVHWRAAAKTYGRRADAVLPFLLLDATEPSGSSGPPVVTADSLPPTGKPDLTTGEPSAS-CLGVNELQQQCPWCGIAVLSTTXXXXXXXXNSGIGKFSLQVPRGGSTTDEPGPAGGRDAATSCREGELAIPNSTISIGDSGARRXXXXXXHTCASCGGELPDTDLWYVKESRDSRCSLRWDQVLSEGRRWRTDFSGGGASAGDSVAADGDGTIVSDAFRRVCLTGRDERASMRRRHRREERGVASGEDLAGAQTQTETVEGGGERSS----------------------------------------VQSGSI----------------------------------------------------------------------------------TTEQAVTKVQSAFRGFHVRRALQAALDSARYVDEEVEGLLRVNGGARFELNAFLVPPPELADGWWGDRDSTAAAPADSNNATLNGNLSGRARATDTRLVDTARFVSSKSPSSERARESQERGLRDGIDALGQQAEDAAATAATAPADPTLEYTVVNQGKGTQDSGGARYERQTVGVGKSRDIGGGV-------GDGGAVAGAEEGLATAWGLSDPMVARAMMKRAKRLRKFQTAE 876
            LPEGFA  LM+P+DP P    T P       + AV CGGLQKLELYHNR+  +HPRAL+GL SLT+LD       XXXXXXXXXXXXXXXXX    LLREPPSPLCLPLL+ELWLSGNQI  MG+WA  P   ++TR  S+ ER  + +   E  + LE S  G   E  L   P  Q  ++    P        +G     G +E   RG        GRT   D++ VWLP+L+VLH+QDN LE+LGGR+SLAGCPLLRSFDASFN+LR PDEI   L+AC  + EVRLHDNPAS C NYAD IALSCP                                                 +L+RMDGV +D  VHWRA A TYGRRAD VLPFLL    E   +S  P   A + P T + + T  + + S  L    +   CPWCG+  L           +  +    +         DE   A G D A+        IP+       SG           C SCG ELP  DLW V ESR +R  + W  V S G RWR  F  G     D +    +    S++FR+ CL GR ER  MRRRHRREER VA+G D    +    TV+GGG+ +S                                        V  G +                                                                                    EQAVTK+QSAFRGFHVRRALQAALDSA+YVD+E+EGLL +NGG RFEL+ FL PPPEL DGW G    T      + N   +     RA+AT  RLVDTAR V S +P+    R        DG++A  +   D+  T  T  A    + T +++     ++G + Y R+T G  ++ D GG         G GG    A+  LA  WGL+DP  ARA  KRAKRLRKFQ  E
Sbjct:  503 LPEGFAVGLMSPTDPIPAQTETCPTV----VERAVACGGLQKLELYHNRLASIHPRALQGLASLTHLDXXXXXXXXXXXXXXXXXXXXXXXXLSQNLLREPPSPLCLPLLNELWLSGNQIRSMGSWASSP---KETRLRSLPERWAKHRAILEG-ALLELS--GDSAEQ-LRASPGDQHLKH---TPFLGRVSEGQGRESEYGKQETSLRG------EHGRTC--DDATVWLPSLEVLHMQDNALETLGGRFSLAGCPLLRSFDASFNQLRAPDEIALSLEACSGLEEVRLHDNPASACPNYADAIALSCPHVSTSTGIDTPLCTCHRGVYVWDWRGHLYQVRCHCDALFVSYVAFQSLFQLMRMDGVHLDAQVHWRAGANTYGRRADLVLPFLL----ETGETSEAPHGAAAATPTTARSETTGNDVNESKALKEASVGDCCPWCGVCTLRAKHANNTVEESDAVNVARVIARGRDGKRDE---ASGLDPASGTTNLPQHIPDCIEGGRSSGPS--------ICVSCGFELPSADLWSVSESRAARSFVSWQGVCSAGGRWRDGFCAG---VRDKIGIGQEEMSESNSFRKACLRGRVEREKMRRRHRREERNVATGADFN--EVGPRTVKGGGDITSRLAPRASSKRRLEVELELGEHHAEERRRQAATQLCSHSGRVDHGGVGASDRACVVLDCASIQPGEDQCNHSYLGTDAFRISPCQASSSRRHTRAARTIQRLWHRRQERTAQLVSSSPSVRQDVGTTWPANEQAVTKLQSAFRGFHVRRALQAALDSAKYVDDELEGLLNINGGDRFELDRFLSPPPELGDGWLG----TNVVAQGNKNIPRHPTPPSRAKATSIRLVDTARAVVSNAPACPHPRGG------DGVEATSRTRLDSYCTGGTGNA---TKSTFLSETAQAVETGRSDY-RETAG--RTSDEGGASARDKASEGGGGPERRAKSDLARDWGLTDPRAARAFAKRAKRLRKFQNGE 1446          
BLAST of mRNA_M-pyrifera_M_contig7129.17002.1 vs. uniprot
Match: A0A835Z7U6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.610e-8
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 0
Query:  650 TEQAVTKVQSAFRGFHVRRALQAALDSARYVDEEVEGLLRVNGGARFELNAFLVPPPELADGW 712
            T +A  K+Q AFRGFHVRRALQAAL+SARYVD E+EG++ +      +++AFL  P +L D W
Sbjct: 1566 TGEAAVKLQRAFRGFHVRRALQAALESARYVDHELEGMVGL------DVDAFLGTPMQLDDDW 1622          
BLAST of mRNA_M-pyrifera_M_contig7129.17002.1 vs. uniprot
Match: A0A7S2S535_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S535_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.420e-5
Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 0
Query:   93 LQKLELYHNRIDFVHPRALEGLMSLTYLDLGRNQLR 128
            LQ+L+LYHN++ F+   AL+GL SLT+LDLGRNQL+
Sbjct:   58 LQRLDLYHNKLSFLPTSALQGLPSLTHLDLGRNQLQ 93          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7129.17002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVE2_ECTSI3.110e-16045.90Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JF94_9PHAE3.520e-14138.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7U6_9STRA4.610e-855.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S535_9STRA5.420e-563.89Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 160..183
e-value: 14.0
score: 12.1
coord: 114..137
e-value: 6.1
score: 15.0
coord: 90..113
e-value: 31.0
score: 9.2
coord: 39..61
e-value: 2.8
score: 16.9
coord: 17..37
e-value: 35.0
score: 8.8
coord: 285..309
e-value: 55.0
score: 7.2
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 649..671
e-value: 0.0038
score: 26.4
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 650..678
score: 8.755
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 271..378
e-value: 6.2E-12
score: 47.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..65
e-value: 2.7E-9
score: 38.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 79..187
e-value: 2.1E-17
score: 64.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 92..151
e-value: 5.3E-13
score: 48.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 162..183
score: 5.232
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 312..333
score: 4.816
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 41..62
score: 4.67
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 19..40
score: 8.536
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 116..139
score: 6.557
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 92..113
score: 5.255
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 140..161
score: 6.156
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 287..308
score: 6.464
NoneNo IPR availablePANTHERPTHR24373SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINcoord: 93..352
coord: 5..153
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7129contigM-pyrifera_M_contig7129:1141..6160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7129.17002.1mRNA_M-pyrifera_M_contig7129.17002.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7129 1141..6160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7129.17002.1 ID=prot_M-pyrifera_M_contig7129.17002.1|Name=mRNA_M-pyrifera_M_contig7129.17002.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=882bp
MKRRDNRLTSLKGLSDLPNLRELRLDINHLTSLHELTFLPSLVELSANTN
HIRALPEGFAAALMAPSDPPTANSTHPHTGGGSEQSAVTCGGLQKLELYH
NRIDFVHPRALEGLMSLTYLDLGRNQLRTLDGRGLESCPALSTLILSQNL
LREPPSPLCLPLLSELWLSGNQIAGMGAWAYGPPQQQQTRPFSIDERGRQ
RQTCSENKSSLEKSQGGVPVELGLEGCPKRQDPRNGGRNPGSALEEPRRG
ANFGCGFEERGARGGEASTFAQGRTDADDESFVWLPTLDVLHLQDNCLES
LGGRWSLAGCPLLRSFDASFNRLRTPDEIVACLQACGDVREVRLHDNPAS
TCHNYADTIALSCPRLVRMDGVGVDTAVHWRAAAKTYGRRADAVLPFLLL
DATEPSGSSGPPVVTADSLPPTGKPDLTTGEPSASCLGVNELQQQCPWCG
IAVLSTTSTTSTESTNSGIGKFSLQVPRGGSTTDEPGPAGGRDAATSCRE
GELAIPNSTISIGDSGARRRRRRRRHTCASCGGELPDTDLWYVKESRDSR
CSLRWDQVLSEGRRWRTDFSGGGASAGDSVAADGDGTIVSDAFRRVCLTG
RDERASMRRRHRREERGVASGEDLAGAQTQTETVEGGGERSSVQSGSITT
EQAVTKVQSAFRGFHVRRALQAALDSARYVDEEVEGLLRVNGGARFELNA
FLVPPPELADGWWGDRDSTAAAPADSNNATLNGNLSGRARATDTRLVDTA
RFVSSKSPSSERARESQERGLRDGIDALGQQAEDAAATAATAPADPTLEY
TVVNQGKGTQDSGGARYERQTVGVGKSRDIGGGVGDGGAVAGAEEGLATA
WGLSDPMVARAMMKRAKRLRKFQTAEVSEVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000048IQ_motif_EF-hand-BS
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt