prot_M-pyrifera_M_contig70955.16935.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig70955.16935.1
Unique Name	prot_M-pyrifera_M_contig70955.16935.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	119

Homology

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BLAST of mRNA_M-pyrifera_M_contig70955.16935.1 vs. uniprot
Match: A0A7S2NJW5_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2NJW5_9DINO)

HSP 1 Score: 134 bits (337), Expect = 2.700e-35
Identity = 71/126 (56.35%), Postives = 92/126 (73.02%), Query Frame = 0

Query:    2 TSPKYRVINALYFIFRMLDNGLLLLIFILTILN-GSLTIPKDPQIALLAGIGTELFYDVLLLTSKFWFLDRLSIYIGCMLYIMYSLLK-------LIWIFLAIRFGAFVFEEMVDIALDCEVHNDL 119
            TSPKYR++NAL+  FR+ DN +LL + +LT++N G +TIP   QIA+ + IG ELFYDVLLLTSKFWFL+RLS YIG  LY+MY ++         IW+ L +RF AF  EE VD+A+D E+HNDL
Sbjct:  160 TSPKYRLLNALFLSFRLTDNLMLLTVAVLTVMNKGHITIPDKSQIAVYSAIGVELFYDVLLLTSKFWFLERLSPYIGIGLYVMYCVIVWVIGSPGYIWVVLGVRFAAFAIEESVDVAIDIEMHNDL 285

[Close]

BLAST of mRNA_M-pyrifera_M_contig70955.16935.1 vs. uniprot
Match: A0A7S4W0U3_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W0U3_9DINO)

HSP 1 Score: 130 bits (327), Expect = 6.880e-34
Identity = 68/126 (53.97%), Postives = 91/126 (72.22%), Query Frame = 0

Query:    2 TSPKYRVINALYFIFRMLDNGLLLLIFILTILNGS-LTIPKDPQIALLAGIGTELFYDVLLLTSKFWFLDRLSIYIGCMLYIMYSLLKLI-------WIFLAIRFGAFVFEEMVDIALDCEVHNDL 119
            TSPKYR++NAL+  FR+ DN +LL + +LT+++G  +T+P   Q+A+ + IG ELFYD+LLLTSKFWFL+RLS YIG  LY MY  +  +       W+ L IRF AF+ EE VDIA+D E+HNDL
Sbjct:  165 TSPKYRLLNALFLSFRLTDNLMLLTVAVLTVMHGGQITVPDKSQVAVYSAIGVELFYDILLLTSKFWFLERLSPYIGVGLYAMYVTIVAVIGSPFYMWVVLGIRFAAFIIEESVDIAIDIEMHNDL 290

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BLAST of mRNA_M-pyrifera_M_contig70955.16935.1 vs. uniprot
Match: X6MLQ1_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MLQ1_RETFI)

HSP 1 Score: 91.7 bits (226), Expect = 3.520e-20
Identity = 50/126 (39.68%), Postives = 79/126 (62.70%), Query Frame = 0

Query:    1 LTSPKYRVINALYFIFRMLDNGLLLLIFILTILNGSLTIPKDPQIALLAGIGTELFYDVLLLTSKFWFLDRLSIYIGCMLYIMYSLLK-------LIWIFLAIRFGAFVFEEMVDIALDCEVHNDL 119
            LT+PKYR+I  +Y +F++ DN   L + I +I + S+T      I + A +G E+FYDV+  T+K WFL R+SI IG +LY++Y++L        ++W    +R  +++ E + D ALD E+HNDL
Sbjct:   27 LTTPKYRLIQLVYILFKLTDNISFLALVIASISSYSITKQDKNYIFVFAVVGVEVFYDVMNFTTKVWFLHRVSILIGAILYVVYAILFHRLGIPWILWTVYFVRLISYILECLTDFALDYEIHNDL 152

[Close]

BLAST of mRNA_M-pyrifera_M_contig70955.16935.1 vs. uniprot
Match: X6LA31_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LA31_RETFI)

HSP 1 Score: 76.3 bits (186), Expect = 2.260e-15
Identity = 39/89 (43.82%), Postives = 61/89 (68.54%), Query Frame = 0

Query:    1 LTSPKYRVINALYFIFRMLDNGLLLLIFILTILNGSLTIPKDPQIALLAGIGTELFYDVLLLTSKFWFLDRLSIYIGCMLYIMYSLLKL 89
            LT+PKYR+I  +Y +F++ DN   L++ I +I + S+T      IA+   +G E+FYDV+  T+K WFL R+SI IG +LY++Y++L L
Sbjct:   34 LTTPKYRLIQLVYILFKLADNISFLVLVIASISSYSVTKQDSNYIAVFTVVGVEIFYDVMNFTTKVWFLHRVSILIGAILYVVYAILFL 122

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig70955.16935.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig70955.16935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A7S2NJW5_9DINO	2.700e-35	56.35	Hypothetical protein n=1 Tax=Alexandrium andersoni...	[more]
A0A7S4W0U3_9DINO	6.880e-34	53.97	Hypothetical protein n=2 Tax=Alexandrium monilatum...	[more]
X6MLQ1_RETFI	3.520e-20	39.68	Uncharacterized protein (Fragment) n=1 Tax=Reticul...	[more]
X6LA31_RETFI	2.260e-15	43.82	Uncharacterized protein (Fragment) n=1 Tax=Reticul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..44
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..68
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 69..73
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 74..96
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 97..119
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..33
None	No IPR available	TMHMM	TMhelix		coord: 74..96
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	TMHMM	TMhelix		coord: 45..67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig70955	contig	M-pyrifera_M_contig70955:79..525 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig70955.16935.1	mRNA_M-pyrifera_M_contig70955.16935.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig70955 79..525 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig70955.16935.1 ID=prot_M-pyrifera_M_contig70955.16935.1|Name=mRNA_M-pyrifera_M_contig70955.16935.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
LTSPKYRVINALYFIFRMLDNGLLLLIFILTILNGSLTIPKDPQIALLAG
IGTELFYDVLLLTSKFWFLDRLSIYIGCMLYIMYSLLKLIWIFLAIRFGA
FVFEEMVDIALDCEVHNDL