prot_M-pyrifera_M_contig70917.16928.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70917.16928.1
Unique Nameprot_M-pyrifera_M_contig70917.16928.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length191
Homology
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: A0A067CQD1_SAPPC (Arp2/3 complex 34 kDa subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQD1_SAPPC)

HSP 1 Score: 134 bits (337), Expect = 4.350e-35
Identity = 80/193 (41.45%), Postives = 117/193 (60.62%), Query Frame = 0
Query:    1 VLGAPLARALRSAREDAKSAA--VELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRP-VPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTRKI 190
            +L AP      +   DA S+   +++ FR   E ++V+P+   R+ +++ +   ++ D+AIARI  QE  E +R V  +P V F      +PP ELRG P + +   HVG+LSF++ K H+D D K  +A   +   R YL YHIKA+K+Y+H RMRKRV  LL VLNRA+P    +K  KKT++GKTF RK+
Sbjct:  118 LLSAPFDHCFLALHADASSSLSPIQIPFRR-QETIYVLPQ-ADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSF----GKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDSDAKRAKACTLVQGFRNYLHYHIKASKTYMHIRMRKRVDLLLQVLNRAQPAKDPSKATKKTITGKTFDRKV 304          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: T0RSJ4_SAPDV (Arp2/3 complex 34 kDa subunit n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RSJ4_SAPDV)

HSP 1 Score: 134 bits (337), Expect = 4.350e-35
Identity = 80/193 (41.45%), Postives = 117/193 (60.62%), Query Frame = 0
Query:    1 VLGAPLARALRSAREDAKSAA--VELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRP-VPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTRKI 190
            +L AP      +   DA S+   +++ FR   E ++V+P+   R+ +++ +   ++ D+AIARI  QE  E +R V  +P V F      +PP ELRG P + +   HVG+LSF++ K H+D D K  +A   +   R YL YHIKA+K+Y+H RMRKRV  LL VLNRA+P    +K  KKT++GKTF RK+
Sbjct:  118 LLSAPFDHCFLALHADASSSLSPIQIPFRR-QETIYVLPQ-ADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSF----GKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDTDAKRAKACTLIQGFRNYLHYHIKASKTYMHIRMRKRVDLLLQVLNRAQPAKDPSKATKKTITGKTFDRKV 304          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: A0A8K1FEV5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEV5_PYTOL)

HSP 1 Score: 130 bits (326), Expect = 1.820e-33
Identity = 77/191 (40.31%), Postives = 122/191 (63.87%), Query Frame = 0
Query:    1 VLGAPLARALRSAREDAKSA--AVELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRPVPKGPGH-VGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTR 188
            ++ AP  +   + +  + S   AV++ FR  +E ++V+P+   R+ +++ +   ++ D+AIAR+  QE V+ +R V  +P V F+     +PP ELRG P  +     VG+LS ++   HVD D+K  +A + +  LR YL YHIKA+K++LH RMRKRV  LL VLNRA+P+   +K+AKKT+SG+TF+R
Sbjct:  118 IISAPFEQCFEALKGGSASGLGAVQIPFRR-NETMYVLPQ-ADRIVIVYSVCFEDKTDQAIARVFLQEFVDTRRTVNNAPPVAFS----KDPPLELRGAPGLRNSADLVGYLSLAIFPTHVDTDEKRAKAASLVQGLRNYLHYHIKASKTHLHIRMRKRVDLLLQVLNRARPEKDPSKQAKKTISGRTFSR 302          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: A0A7S0XD73_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XD73_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.290e-33
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 0
Query:   29 PHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRPVPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTRK 189
            P+E ++V P P  ++ VI+ +D  +  D+++ARI  QE VE QR +  +P V+F+     EPP EL        P   GFLSF LE+RH+  DKK + A+  LT  R+YL YHIK +K+YLH RMRK+VA  L VLNRA+P+    +  KKTM GKTF RK
Sbjct:  146 PNETIFVCPAPA-KIVVIFLVDFNDITDKSLARIFLQEFVEAQRSIRTAPPVNFS----REPPLELANLRFTYNPDATGFLSFGLEERHITGDKK-QTAITLLTGFRSYLYYHIKCSKTYLHMRMRKKVAGWLQVLNRARPE---IETEKKTMGGKTFVRK 297          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: A0A024U441_9STRA (Arp2/3 complex 34 kDa subunit n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U441_9STRA)

HSP 1 Score: 129 bits (323), Expect = 5.170e-33
Identity = 82/197 (41.62%), Postives = 117/197 (59.39%), Query Frame = 0
Query:    1 VLGAPLAR---ALRSAREDAKSAAVELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRG----RPVPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTRKI 190
            +LGAPL     AL + +    S  +++ FR   E ++++P+   R+ +++ +   ++ D+AIAR+  QE  E +R V  +P V F      +PP ELR     RP      HVG+LSF++ K H+D D K  +A   L   R YL YHIKA+K+YLH RMRKRV  LL VLNRA+P     K +KKT++GKTF RK+
Sbjct:  118 ILGAPLDHCFLALHAGQAKVLSP-IQIPFRR-QETIYILPQ-DDRIVIVFSVAFQDKTDQAIARVFLQEFAEARRHVNNAPPVSF----GKDPPLELRAVSGLRPCAD---HVGYLSFAIFKSHIDTDAKREKACTLLQGFRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRAQPPKDPTKTSKKTITGKTFDRKV 304          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: G4Z955_PHYSP (Arp2/3 complex 34 kDa subunit n=30 Tax=Peronosporaceae TaxID=4777 RepID=G4Z955_PHYSP)

HSP 1 Score: 126 bits (316), Expect = 5.490e-32
Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    1 VLGAPLARALRSAREDAKSAA--VELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRP-VPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTR 188
            +LGAP  +   + +    S+   V++ +R  +E ++V+P+   R+ +++ +   ++ D+AIAR+  QE V+ +R V  +P V F      +PP ELRG P +   P  VG+LS ++   HVD  +K  +A   +  LR YL YHIKA+K+YLH RMRKRV  LL VLNRA+P+   +K  KKT++G+TF R
Sbjct:  118 ILGAPFEQCFEALQNGNASSLGPVQIPYRR-NETIYVLPQ-ADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNNAPPVAF----GKDPPLELRGAPGLRNSPDLVGYLSIAIFPTHVDTTEKRIKAATLVQGLRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRARPEKDQSKTQKKTITGRTFAR 302          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: K3WLT3_GLOUD (Arp2/3 complex 34 kDa subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLT3_GLOUD)

HSP 1 Score: 125 bits (313), Expect = 1.520e-31
Identity = 77/191 (40.31%), Postives = 115/191 (60.21%), Query Frame = 0
Query:    1 VLGAPLARALRSAREDAKS--AAVELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRPVPKGPGH-VGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTR 188
            +L AP  +   +      S  A V++ FR   E ++V+P+   R+ +++ +   ++ D+AIAR+  QE V+ +R V G+P   F+     +PP ELRG P  +     VG+LS ++   HVD   K  +A + +  LR YL YHIKA+K+YLH RMRKRV  LL VLNRAKP+   +K +KKT++G+TF R
Sbjct:  118 ILAAPFEQCFEALANGTSSSLAPVQIPFRRS-ETMYVLPQ-ADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNGAPPAAFS----KDPPLELRGAPGLRNSSDLVGYLSLAIFPTHVDTPAKRVKAASLIQGLRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRAKPEKDPSKASKKTITGRTFER 302          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: A0A484E080_BRELC (Arp2/3 complex 34 kDa subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E080_BRELC)

HSP 1 Score: 124 bits (312), Expect = 2.140e-31
Identity = 73/169 (43.20%), Postives = 108/169 (63.91%), Query Frame = 0
Query:   21 AVELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRP-VPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTR 188
            AV++ FR  +E ++V+P+   R+ +++ +   ++ D+AIAR+  QE V+ +R V  +P V F      +PP ELRG P + + P  VG+LS ++   HVD  +K  +A   +  LR YL YHIKA+K+YLH RMRKRV  LL VLNRA+P+    K  KKT++G+TF R
Sbjct:  140 AVQIPFRR-NETVYVLPQ-ADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNNAPPVAF----GRDPPLELRGAPGLCQSPDLVGYLSLAIFPTHVDTAEKRIKAATLVQGLRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRARPEKDQTKTQKKTITGRTFAR 302          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: A0A5A8CNA0_CAFRO (Arp2/3 complex 34 kDa subunit n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNA0_CAFRO)

HSP 1 Score: 125 bits (313), Expect = 2.910e-31
Identity = 69/141 (48.94%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   29 PHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRPVPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKP 169
            P E +WV+PR   R+TV+W L+     D A+ R++  E+ E  R+V  +PS  F D  A  PP E R   V  GP  VGF+S +L K HV+   KL QAV  L +LRA+L YHIKAAK+ LHTRMR RV   L VL RA P
Sbjct:  174 PSEHIWVVPR-SDRLTVVWSLEFPNAFDAALGRVIASELAEAGRKVPAAPSAIFYDIDA--PPAETRDTAVTLGPNAVGFVSITLLKSHVETPAKLSQAVDKLVLLRAFLLYHIKAAKAALHTRMRARVDSWLQVLRRASP 311          
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Match: A0A0W8DBT4_PHYNI (Arp2/3 complex 34 kDa subunit n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DBT4_PHYNI)

HSP 1 Score: 124 bits (310), Expect = 3.640e-31
Identity = 71/168 (42.26%), Postives = 107/168 (63.69%), Query Frame = 0
Query:   22 VELSFRAPHEALWVIPRPGQRVTVIWCLDLAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRP-VPKGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLHTRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTR 188
            V++ +R  +E ++V+P+   R+ +++ +   ++ D+AIAR+  QE V+ +R V  +P V F      +PP ELRG P +   P  VG+LS ++   HVD  +K  +A   +  LR YL YHIKA+K+YLH RMRKRV  LL VLNRA+P+   +K  KKT++G+TF R
Sbjct:  134 VQIPYRR-NETIYVLPQ-ADRIVIVYSVCFEDKTDQAIARVFLQEFVDTRRTVNNAPPVAF----GKDPPLELRGAPGLRHSPDLVGYLSLAIFPTHVDTTEKRVKAATLVQGLRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRARPEKDQSKTQKKTITGRTFAR 295          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70917.16928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067CQD1_SAPPC4.350e-3541.45Arp2/3 complex 34 kDa subunit n=3 Tax=Saprolegniac... [more]
T0RSJ4_SAPDV4.350e-3541.45Arp2/3 complex 34 kDa subunit n=1 Tax=Saprolegnia ... [more]
A0A8K1FEV5_PYTOL1.820e-3340.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0XD73_9STRA2.290e-3347.20Arp2/3 complex 34 kDa subunit n=1 Tax=Chromulina n... [more]
A0A024U441_9STRA5.170e-3341.62Arp2/3 complex 34 kDa subunit n=4 Tax=Aphanomyces ... [more]
G4Z955_PHYSP5.490e-3239.79Arp2/3 complex 34 kDa subunit n=30 Tax=Peronospora... [more]
K3WLT3_GLOUD1.520e-3140.31Arp2/3 complex 34 kDa subunit n=1 Tax=Globisporang... [more]
A0A484E080_BRELC2.140e-3143.20Arp2/3 complex 34 kDa subunit n=1 Tax=Bremia lactu... [more]
A0A5A8CNA0_CAFRO2.910e-3148.94Arp2/3 complex 34 kDa subunit n=2 Tax=Cafeteria ro... [more]
A0A0W8DBT4_PHYNI3.640e-3142.26Arp2/3 complex 34 kDa subunit n=7 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007188Actin-related protein 2/3 complex subunit 2PFAMPF04045P34-Arccoord: 10..170
e-value: 3.5E-40
score: 138.2
IPR007188Actin-related protein 2/3 complex subunit 2PANTHERPTHR12058ARP2/3 COMPLEX 34 KDA SUBUNITcoord: 1..188
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 6..189
e-value: 2.7E-45
score: 156.0
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 29..170
NoneNo IPR availablePANTHERPTHR12058:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2coord: 1..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70917contigM-pyrifera_M_contig70917:590..1162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70917.16928.1mRNA_M-pyrifera_M_contig70917.16928.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70917 590..1162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70917.16928.1 ID=prot_M-pyrifera_M_contig70917.16928.1|Name=mRNA_M-pyrifera_M_contig70917.16928.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp
VLGAPLARALRSAREDAKSAAVELSFRAPHEALWVIPRPGQRVTVIWCLD
LAERMDRAIARIVCQEMVENQRRVTGSPSVHFTDSSASEPPQELRGRPVP
KGPGHVGFLSFSLEKRHVDDDKKLRQAVATLTMLRAYLTYHIKAAKSYLH
TRMRKRVAELLLVLNRAKPDDPLAKKAKKTMSGKTFTRKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007188ARPC2
IPR034666ARPC2/4