prot_M-pyrifera_M_contig70890.16920.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70890.16920.1
Unique Nameprot_M-pyrifera_M_contig70890.16920.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length41
Homology
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BLAST of mRNA_M-pyrifera_M_contig70890.16920.1 vs. uniprot
Match: D8LI59_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI59_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 5.330e-15
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:    1 MATSQDGMAWQKRGPVFDGGPEGAFDEAGAGRRRVVMLNG 40
            MATSQDG+AW+K+GPVFDGGPEG+FDE GAGRRR+VM  G
Sbjct:  315 MATSQDGLAWEKKGPVFDGGPEGSFDERGAGRRRIVMHKG 354
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70890.16920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI59_ECTSI5.330e-1580.00Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023296Glycosyl hydrolase, five-bladed beta-propellor domain superfamilyGENE3D2.115.10.20coord: 1..40
e-value: 2.2E-6
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70890contigM-pyrifera_M_contig70890:316..438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70890.16920.1mRNA_M-pyrifera_M_contig70890.16920.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70890 316..441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70890.16920.1 ID=prot_M-pyrifera_M_contig70890.16920.1|Name=mRNA_M-pyrifera_M_contig70890.16920.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=41bp
MATSQDGMAWQKRGPVFDGGPEGAFDEAGAGRRRVVMLNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023296Glyco_hydro_beta-prop_sf