prot_M-pyrifera_M_contig70769.16893.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70769.16893.1
Unique Nameprot_M-pyrifera_M_contig70769.16893.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length276
Homology
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A5A8E0L5_CAFRO (Choline transporter-like protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0L5_CAFRO)

HSP 1 Score: 97.4 bits (241), Expect = 3.470e-19
Identity = 97/287 (33.80%), Postives = 129/287 (44.95%), Query Frame = 0
Query:    3 DTSNSLEVGEFLVFLLVATGVGVVMSVLYLEVMYRFAGVLIRAMFLFGVVALTL---LAVWCFSLXXXXXXXXXXXXXXXXXXXXXXRRGRIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLV------RYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGS--PS--TFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            D +     G+ +  LL A  VG V+S L++  + R+A  LI       +V   +   L+ W F +                      R   I FA+A+L  A++AI +   TV  AY SL  Q A+  +WA A  G    V       +HVK        D A L  A +    S                         Y   GS  PS  T  L A+   L+ SFYW  QVIRNTL+V+ +G VGTWW     +DPT GS  RA TTSFGS+ALGSL++A+VQT+
Sbjct:  137 DQNTFFSPGDAVKSLLAAAVVGAVLSALWIFFLIRWARALITCTVWSAIVVNIIAAGLSFWIFRVWFVALPWLLLAALAACFWWSMRRH--IPFASANLSIASKAISNACMTVAYAYVSLALQFAWNVVWAFAAVGIAMAVIRGSRDHHHVKGA------DPARLDAADSPVLGSAVDDDD-------------------YAGNGSNVPSSTTGPLFAVAVALVFSFYWGSQVIRNTLHVVTAGTVGTWWATSGRSDPTCGSVRRACTTSFGSIALGSLVIAIVQTI 396          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A812XA87_9DINO (Choline transporter-like protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XA87_9DINO)

HSP 1 Score: 96.3 bits (238), Expect = 8.580e-19
Identity = 89/297 (29.97%), Postives = 130/297 (43.77%), Query Frame = 0
Query:    2 PDTSNSLEVGEFLVFLLVATGVGVVMSVLYLEVMYRFAGVLIRAMFLFGVVA--------------LTLLAVWCFSLXXXXXXXXXXXXXXXXXXXXXXRRGRIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPSTF-------VLLALLTF-LLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            P+T+  +   E L  LL   G+  ++S L++  + R A   I    LF VV               + LL +WC +                        R R+AFA A++   A A+  Y  T+ +A+ +LLA   +V LW+ AVAG    V    K +A  G   +  L   T+                           P H    G+P              LLTF +L+SFYW +QV RN L+  ++G VGTWW +     PT G+  RA+TTSFG++ALGSL++A++Q L
Sbjct:  129 PETTVDVSGKEVLYILLFTAGMATILSGLWVTFLIRCAKSFIIFTILFKVVISVGMGIGLYILTKQIALLIIWCLA-------------GCLGLLWYCCVRKRLAFAGANVEVGAGAVGLYPATLFTAFGALLASFVWVALWSTAVAGIF--VTIINKDMAQQGDSQSRLLAGTTS-------------------------DDPGHDNNGGTPEDVDPSSGAAAKFTLLTFVMLISFYWGVQVCRNVLHTTIAGTVGTWWRQARPESPTYGALCRAMTTSFGTIALGSLIIAIIQAL 385          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A397EZJ6_9STRA (Choline transporter-like protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZJ6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.920e-15
Identity = 68/187 (36.36%), Postives = 87/187 (46.52%), Query Frame = 0
Query:   90 RIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPSTFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            RI FAAA+LR A  AIR +  T   A+  LL QIA+V +WA AV G           I    TE++     + T T  S                      P  Y    S S         FLLLSF+W +QV +N ++  V+G V TWW    +   T  S  RA TTS GS+  GSL+VA++QTL
Sbjct:  208 RIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVG-----------ITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNYCTSGVCKEPNVYAQLKSTSYVAYF----FLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGATGASLGRATTTSLGSICFGSLIVAVLQTL 379          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A397BUA5_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BUA5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.310e-15
Identity = 68/187 (36.36%), Postives = 87/187 (46.52%), Query Frame = 0
Query:   90 RIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPSTFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            RI FAAA+LR A  AIR +  T   A+  LL QIA+V +WA AV G           I    TE++     + T T  S                      P  Y    S S         FLLLSF+W +QV +N ++  V+G V TWW    +   T  S  RA TTS GS+  GSL+VA++QTL
Sbjct:  385 RIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVG-----------ITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNYCTSGVCKEPNVYAQLKSTSYVAYF----FLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGATGASLGRATTTSLGSICFGSLIVAVLQTL 556          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A418CRM6_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CRM6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.660e-15
Identity = 68/187 (36.36%), Postives = 87/187 (46.52%), Query Frame = 0
Query:   90 RIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPSTFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            RI FAAA+LR A  AIR +  T   A+  LL QIA+V +WA AV G           I    TE++     + T T  S                      P  Y    S S         FLLLSF+W +QV +N ++  V+G V TWW    +   T  S  RA TTS GS+  GSL+VA++QTL
Sbjct:  709 RIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVG-----------ITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNYCTSGVCKEPNVYAQLKSTSYVAYF----FLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGATGASLGRATTTSLGSICFGSLIVAVLQTL 880          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A067CHQ4_SAPPC (Choline transporter-like protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHQ4_SAPPC)

HSP 1 Score: 84.3 bits (207), Expect = 9.260e-15
Identity = 64/189 (33.86%), Postives = 87/189 (46.03%), Query Frame = 0
Query:   88 RGRIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPSTFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            R RI FAAA+LR AA AI+ +  T   A+  L+ QI +V +WA A  G    +  H+     D T         +T + +S                       V Y                F+L+SF+W MQ I+N  +  V+G V TWW    +A  T  S  R LTTSFGS+ LGSL+VA++Q L
Sbjct:  174 RDRIPFAAANLRCAAAAIKKHASTYCVAFSMLVLQIVWVAVWATAALG----LANHLNE--KDATSSTRGKPDGSTCSISSECMSNKCSATYRCEAAGLKSASYVAY---------------FFMLISFFWGMQTIKNVTHATVAGTVATWWYSTNSAGATGASLKRTLTTSFGSICLGSLIVAILQAL 341          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A485LJK1_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJK1_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.190e-14
Identity = 61/189 (32.28%), Postives = 90/189 (47.62%), Query Frame = 0
Query:   88 RGRIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPSTFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            R RI FAAA+L+ A  AI+ +      A+  +  QI +V +WA+A+ G    + +   P A DG     A     +   +++                      V Y                F+L+SFYW + V++N L+V V+G V +WW     +D T G+  RA TTSFGS+ LGSLLVA++Q L
Sbjct:  191 RHRIPFAAANLQVATSAIKHHWSIFPVAFGLMGVQIVWVFIWAIALVG----IVHKKAPPAADGLGGLGATCMTNSNCQSNLCGPATPSAAAMTCQLHTAPGDAVAY---------------FFMLVSFYWGVTVVKNVLHVTVAGTVASWWAAGNASDVTAGAFRRATTTSFGSICLGSLLVAVLQAL 360          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A1V9ZB42_9STRA (Choline transporter-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB42_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.880e-13
Identity = 64/191 (33.51%), Postives = 91/191 (47.64%), Query Frame = 0
Query:   88 RGRIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAG-SLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPST-FVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            R RI FAAA+LRTAA AI+ +  T   A+ SL+ QI +V +WA A  G +  L      P+   G  + A      TY+                              Y  +PS          F+L++F+W + V++N  +  V+G V TWW    +   T  S  R+LTTSFGS+ LGSL+VA++Q L
Sbjct:  172 RDRIPFAAANLRTAAGAIKKHASTYCVAFTSLIMQIIWVGIWATAALGLANHLSESQDSPVNAGGLANNAKC----TYSYQCASNNCVK-------------------NYCEAPSLKSTSYVAYFFMLIAFFWGLTVVKNVTHATVAGTVATWWYSNNSDGATGASLKRSLTTSFGSICLGSLIVAILQAL 339          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A5D6XTK2_9STRA (Choline transporter-like protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTK2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.650e-13
Identity = 64/188 (34.04%), Postives = 88/188 (46.81%), Query Frame = 0
Query:   90 RIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIA-GDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYGYTGSPSTFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            RI FA A+LR A  AI  ++ T   A    + QIA+V +WALA+ G    V  +V   +   GT +      A++   ++                      P +Y                FLL+SFYW +QV +N  +V VSG V T+W    +A  T  S  RA TTSFGS+  GSLLVA++Q L
Sbjct:  207 RIPFAVANLRVAEAAISKHKSTYAVAIVFTVVQIAWVAIWALALLG----VANNVDTDSTSTGTLENGDYCTASSQCISNSCKIRGGSRQCVSSTAKFFKSSPANY------------IAYFFLLISFYWGLQVFKNIAHVTVSGTVATFWYNSESAGATGSSLKRATTTSFGSICFGSLLVAILQAL 378          
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Match: A0A6G0WYB7_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYB7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.430e-13
Identity = 68/194 (35.05%), Postives = 94/194 (48.45%), Query Frame = 0
Query:   90 RIAFAAAHLRTAARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGDGTEDAAALFPATTYTATSIXXXXXXXXXXXXXXXXXXXXGPVHYG--YTGSPSTFVLL-----ALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRGSAVRALTTSFGSVALGSLLVALVQTL 276
            RI FAAA+L+ AA AIR +      A+  L+ Q+A+V +W +AV G    +  H+     DGT       PA + T T                      G +        + + F  L         FLL+SF+W + V +N L+V V+GAVG+WW    T    RGS  RA +TS GS+ LGSLLVA++Q L
Sbjct:  164 RIPFAAANLKVAASAIRTHGSMHAVAFLFLVLQLAWVFVWCVAVVG----ITNHLT----DGTA------PANSPTGTLANGVRCSKNDQCISNNCVASGGLMLTSRRVCRAQTAFTQLRGEAYVAYFFLLVSFFWGVNVCKNILHVTVAGAVGSWWHTNQTTGVVRGSLKRASSTSLGSICLGSLLVAILQAL 343          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70769.16893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8E0L5_CAFRO3.470e-1933.80Choline transporter-like protein n=1 Tax=Cafeteria... [more]
A0A812XA87_9DINO8.580e-1929.97Choline transporter-like protein n=1 Tax=Symbiodin... [more]
A0A397EZJ6_9STRA2.920e-1536.36Choline transporter-like protein n=7 Tax=Aphanomyc... [more]
A0A397BUA5_9STRA3.310e-1536.36Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A418CRM6_9STRA3.660e-1536.36Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A067CHQ4_SAPPC9.260e-1533.86Choline transporter-like protein n=2 Tax=Saprolegn... [more]
A0A485LJK1_9STRA3.190e-1432.28Choline transporter-like protein n=1 Tax=Aphanomyc... [more]
A0A1V9ZB42_9STRA1.880e-1333.51Choline transporter-like protein n=1 Tax=Achlya hy... [more]
A0A5D6XTK2_9STRA2.650e-1334.04Choline transporter-like protein n=1 Tax=Pythium b... [more]
A0A6G0WYB7_9STRA3.430e-1335.05Choline transporter-like protein n=1 Tax=Aphanomyc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 72..276
e-value: 1.2E-34
score: 120.0
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 8..276
NoneNo IPR availablePANTHERPTHR12385:SF4PROTEIN PNS1coord: 8..276
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 241..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 274..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..40
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 41..60
NoneNo IPR availableTMHMMTMhelixcoord: 223..240
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 250..272
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70769contigM-pyrifera_M_contig70769:1..828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70769.16893.1mRNA_M-pyrifera_M_contig70769.16893.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70769 1..828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70769.16893.1 ID=prot_M-pyrifera_M_contig70769.16893.1|Name=mRNA_M-pyrifera_M_contig70769.16893.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp
FPDTSNSLEVGEFLVFLLVATGVGVVMSVLYLEVMYRFAGVLIRAMFLFG
VVALTLLAVWCFSLGVVVAGVMLLVIAAIIAMVYWCRRGRIAFAAAHLRT
AARAIRDYRGTVTSAYFSLLAQIAFVPLWALAVAGSLWLVRYHVKPIAGD
GTEDAAALFPATTYTATSITPTPTPTTPTSLSSSPSSSPGPVHYGYTGSP
STFVLLALLTFLLLSFYWTMQVIRNTLYVIVSGAVGTWWVEPLTADPTRG
SAVRALTTSFGSVALGSLLVALVQTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like