prot_M-pyrifera_M_contig7076.16889.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7076.16889.1
Unique Nameprot_M-pyrifera_M_contig7076.16889.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
BLAST of mRNA_M-pyrifera_M_contig7076.16889.1 vs. uniprot
Match: D7G7N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N6_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 3.990e-23
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    7 GVGSWLVDLIMKPGTSVQLVPAINVALVLIVGLLVYLVLNGESSIHVYVMGFLAVGLMASVNW 69
            G+G WLVDL MKPG+SVQLVP IN  L ++VGLLVY+  +GE SIHVYVMGFL++GLM SVNW
Sbjct:   23 GIGQWLVDLAMKPGSSVQLVPFINGVLCILVGLLVYVAASGEGSIHVYVMGFLSIGLMGSVNW 85          
BLAST of mRNA_M-pyrifera_M_contig7076.16889.1 vs. uniprot
Match: A0A7S1UA77_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA77_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 6.020e-16
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    9 GSWLVDLIMKPGTSVQLVPAINVALVLIVGLLVYLVL---NGESSIHVYVMGFLAVGLMASVNWFISEFNKVKQQQEQDG-GGAPAAKEDAAGRQKSD 102
            G W ++LIM PG+SVQL+P IN+AL +++G++ Y      NG   +H  VM FLA+GL   +NWF+ E+ K K +QE  G  GA       A R+K D
Sbjct:   32 GEWAINLIMAPGSSVQLLPVINLALAIVIGVMGYTAYSTDNGAVQLHCSVMSFLALGLCVVINWFVGEYQKAKAEQEAAGDSGAEPEPASGASRRKID 129          
BLAST of mRNA_M-pyrifera_M_contig7076.16889.1 vs. uniprot
Match: A0A7S2WUH3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUH3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 8.130e-10
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    4 PSGGVGSWLVDLIMKPGTSVQLVPAINVALVLIVGLLVYLVLNGESSIHVYVMGFLAVGLMASVNWFISEFNKVK 78
            P  GV   LV  +++PGT   L+P IN +L  ++  L  +   G  SIH+ VM  LA+GLMASVNWF++EF +++
Sbjct:    6 PEDGVLQTLVVALVEPGTGHLLLPFINYSLCALLLTLAVVAAYGYGSIHLVVMAILALGLMASVNWFVAEFKRLE 80          
BLAST of mRNA_M-pyrifera_M_contig7076.16889.1 vs. uniprot
Match: A0A482S8M5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8M5_9ARCH)

HSP 1 Score: 53.5 bits (127), Expect = 1.980e-7
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:   11 WLVDLIMKPGTSVQLVPAINVALVLIVG-LLVYLVLNGESSIHVYVMGFLAVGLMASVNW 69
            +++DLI +PG+S+ LVPAINV ++L++  LLV       + IH+ VM  LAVGL+ SVNW
Sbjct:    6 FILDLIFQPGSSLWLVPAINVTVLLLIAMLLVTGFYTDVAKIHIVVMSTLAVGLLLSVNW 65          
BLAST of mRNA_M-pyrifera_M_contig7076.16889.1 vs. uniprot
Match: A0A1V9ZQU9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZQU9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.620e-6
Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 0
Query:   17 MKPGTSVQLVPAINVALVLIVGLLVYLVLNG-ESSIHVYVMGFLAVGLMASVNWFISEFNKVKQQQEQDGGGAPAAKEDA 95
            ++PG   + V  +N+ L+ +VG++   + +G E S H+Y+  FLAVGL AS+NWFI E   +    + D GG+  AK+ A
Sbjct:   12 LEPGAGNKFVIVLNLVLIALVGVISMTIWSGMEDSFHMYIFLFLAVGLTASINWFIVEARALAANGQLDLGGSDPAKKAA 91          
BLAST of mRNA_M-pyrifera_M_contig7076.16889.1 vs. uniprot
Match: L1JD47_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JD47_GUITC)

HSP 1 Score: 50.8 bits (120), Expect = 1.040e-5
Identity = 30/78 (38.46%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    6 GGVGSWLVDLIMKPGTSV-----QLVPAINVALVLIVGLLVYLVLNGESSIHVYVMGFLAVGLMASVNWFISEFNKVK 78
            GG GSWLV+ +MKPG+S+     +++  + +AL L +  L++L      +IH Y+   LA+GL  SV +FI+E  K +
Sbjct:   11 GGAGSWLVEWLMKPGSSMSAGMQKVLNNVFIALFLCIIFLMWL--TNFGNIHTYIFFLLALGLFFSVRFFITELTKAQ 86          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7076.16889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G7N6_ECTSI3.990e-2371.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1UA77_9STRA6.020e-1643.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WUH3_9STRA8.130e-1044.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482S8M5_9ARCH1.980e-750.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1V9ZQU9_9STRA1.620e-638.75Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
L1JD47_GUITC1.040e-538.46Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013945V-type ATPase assembly factor Pkr1PFAMPF08636Pkr1coord: 12..78
e-value: 1.9E-15
score: 56.8
IPR013945V-type ATPase assembly factor Pkr1PANTHERPTHR28251FAMILY NOT NAMEDcoord: 7..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..102
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7076contigM-pyrifera_M_contig7076:6338..11328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7076.16889.1mRNA_M-pyrifera_M_contig7076.16889.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7076 6336..11340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7076.16889.1 ID=prot_M-pyrifera_M_contig7076.16889.1|Name=mRNA_M-pyrifera_M_contig7076.16889.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
MPAPSGGVGSWLVDLIMKPGTSVQLVPAINVALVLIVGLLVYLVLNGESS
IHVYVMGFLAVGLMASVNWFISEFNKVKQQQEQDGGGAPAAKEDAAGRQK
SD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013945Pkr1