prot_M-pyrifera_M_contig70667.16870.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70667.16870.1
Unique Nameprot_M-pyrifera_M_contig70667.16870.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
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BLAST of mRNA_M-pyrifera_M_contig70667.16870.1 vs. uniprot
Match: A0A6H5LA89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA89_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 3.940e-9
Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 0 
Query:   11 EFRMQKAMSPSGAWKELEDYYMPKTIAATHRLRREFDTIRMAGDENPLLFLGRVDKAADELAMLGCGKSAEEVNRHIVSNLSSLYTIQSKSILS 104
            E  +    S +GAW+ +ED+Y+P   A    L  E D I M+ DE+P LF  RV +   +L  +G  KS +EV R +V  L + Y ++ ++ LS
Sbjct:  178 ENNLYSCHSVAGAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVRILVRQLPARYDVEKRTSLS 271
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70667.16870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LA89_9PHAE3.940e-936.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 15..97
e-value: 1.2E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70667contigM-pyrifera_M_contig70667:262..576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70667.16870.1mRNA_M-pyrifera_M_contig70667.16870.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70667 262..576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70667.16870.1 ID=prot_M-pyrifera_M_contig70667.16870.1|Name=mRNA_M-pyrifera_M_contig70667.16870.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
MEAMTGYDMAEFRMQKAMSPSGAWKELEDYYMPKTIAATHRLRREFDTIR
MAGDENPLLFLGRVDKAADELAMLGCGKSAEEVNRHIVSNLSSLYTIQSK
SILSR
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