prot_M-pyrifera_M_contig70443.16817.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70443.16817.1
Unique Nameprot_M-pyrifera_M_contig70443.16817.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length289
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70443.16817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..289
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..24
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 75..94
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70443contigM-pyrifera_M_contig70443:234..1100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70443.16817.1mRNA_M-pyrifera_M_contig70443.16817.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70443 234..1100 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70443.16817.1 ID=prot_M-pyrifera_M_contig70443.16817.1|Name=mRNA_M-pyrifera_M_contig70443.16817.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=289bp
GAVLAAAGVVLGLVKLSGLTTHQALDEFMRAFPKDMDLANVGQLDATARL
TAVGSYIAACGLGIALVAWPRRKQLAFFVLGAGIARYLIPEFFARTELVQ
IATEPGEAVLPELVVTGLYLVTAAALMGALAVWRDAAGKRRRPLATPVLV
LLAAGAAFLPHASFATDAVATAPWRRFEAQPAYLADTAYGLVAVETHATG
TPLLVVDGLTFTPPPSAIEADVRAFRRSLDLLAANHQPDDPDPRVLLVGQ
LTQPRLYAFWDWRDATGLDAELIWTAPWTDLLEDLEPLL
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