prot_M-pyrifera_M_contig70200.16781.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70200.16781.1
Unique Nameprot_M-pyrifera_M_contig70200.16781.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length228
Homology
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A5A8DZA9_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DZA9_CAFRO)

HSP 1 Score: 239 bits (611), Expect = 6.500e-71
Identity = 120/220 (54.55%), Postives = 159/220 (72.27%), Query Frame = 0
Query:    5 PPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLK 224
            P   ++NL+WSF++ HL+Q++I+F ++TK ARF FEV+RRLRPG+ VMELHG++ H +R  +Y  F+   AA + ATDVAARGLDF G+DWVLQ+DCP+D  TYIHRVGRTAR    GN L V  P EA   L  LRDAK+ LK+ +I AA A ++Q  VAAEVAAD  L+YLA+RA  S+VRS  +QP+  VFD + +D   LA ++GLP  P+  +L+
Sbjct:  241 PLADKVNLLWSFVKAHLKQRTIVFVSSTKQARFLFEVLRRLRPGVPVMELHGRIAHDKRTAIYSDFLKKKAAVMLATDVAARGLDFPGLDWVLQLDCPEDAATYIHRVGRTARFRMRGNGLLVLLPSEAPAMLQRLRDAKVPLKRITIAAAQARSVQGLVAAEVAADSHLRYLAQRAFASYVRSVMLQPDSEVFDAAELDADALATSYGLPSTPRAKALE 460          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: R7QCX2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX2_CHOCR)

HSP 1 Score: 204 bits (520), Expect = 1.010e-57
Identity = 104/228 (45.61%), Postives = 156/228 (68.42%), Query Frame = 0
Query:    1 FSPSPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKLGL 228
            F+  P   +L+++WSF++THL+ K I+FFAT K  RF FE   +LRPG+S++ +HG +K M+R ++Y+ F  + +AALFATDVA+RGLDF  V+WV+QVDCPDDV TY+HRVGRTAR    G ++ + S  +   FL  L++  L L +T I+     +I+ ++AA VA++ +LK LA+RA + +V+S + Q ++ VFD   ID   LA ++GL  VPK +  K +G+
Sbjct:  333 FAVVPVHDKLSVLWSFIKTHLKSKMIIFFATGKQVRFAFETFCKLRPGMSLLHIHGNMKQMKRTDMYDIFCRTKSAALFATDVASRGLDFPDVEWVVQVDCPDDVGTYVHRVGRTARFKSQGRAMLLLSEGKEEGFLCRLKEKNLELHRTKINPNKVTSIEPRIAATVASNQELKKLAQRAFMFYVKSLYQQSDREVFDIDGIDFRLLAKSYGLSLVPKISFRKAVGV 560          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A834PIJ2_MARMO (Helicase C-terminal domain-containing protein n=6 Tax=Marmota monax TaxID=9995 RepID=A0A834PIJ2_MARMO)

HSP 1 Score: 193 bits (491), Expect = 3.450e-56
Identity = 94/218 (43.12%), Postives = 148/218 (67.89%), Query Frame = 0
Query:    9 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 226
            ++++++SFLR+HL++KSI+FF++ K  ++ + V  RLRPG+S++ LHG+ + MRR+EVY  F+   AA LFATD+AARGLDF  V+WVLQ DCP+D  TYIHR GRTAR  + G +L +  P E +  +  L   K+ +K+  I+    I++Q K+ + +A D DLK  A+R  +S++RS ++  +K VFD + + +P+ A + GL   P+   L+K+
Sbjct:   25 KISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFDVNKLPIPEYALSLGLAVAPRVRFLQKM 242          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A0L0SBJ3_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SBJ3_ALLM3)

HSP 1 Score: 201 bits (510), Expect = 4.750e-56
Identity = 102/222 (45.95%), Postives = 146/222 (65.77%), Query Frame = 0
Query:    4 SPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKK 225
            +P   +L+L+WSF+R HL QKS++F ++ K  RF +E  R+++PG+ +M +HGK K   RL VYE F  + A  LFATD+AARGLDF  V WV+QVD P+D  TYIHRVGRTAR    GN+L    P E +  L +L+D   SL++  I+ +  +++  ++ A  +   DLKYLA++A  ++V+S ++Q NKTVFD   + L + A A GLP +PK   LKK
Sbjct:  290 TPLPDKLDLLWSFIRAHLGQKSLVFLSSCKQVRFVYEAFRKMQPGIPLMHMHGKQKQAARLAVYEAFSKTTACVLFATDIAARGLDFPAVHWVVQVDAPEDAPTYIHRVGRTARYQDGGNALMFLLPSEEQGMLAVLKDKVPSLRRIKINPSKTVDVSTQLEALCSQFTDLKYLAQKAFATYVKSIYLQSNKTVFDVHALPLQEYAAALGLPGMPKVKFLKK 511          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A7N4PZ98_SARHA (RNA helicase n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4PZ98_SARHA)

HSP 1 Score: 199 bits (506), Expect = 4.820e-56
Identity = 101/218 (46.33%), Postives = 148/218 (67.89%), Query Frame = 0
Query:    9 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 226
            ++++++SFLR+HL++KSI+FFA+ K  ++ F V  RLRPG+S++ LHGK + MRR+EVY  F+   AA LFATD+AARGLDF  V+WVLQ DCP+D  TYIHR GRTAR  + G SL +  P E +  +  L   K+ +K+  I+    I+IQ K+ A +A D DLK  A+R  +S++RS ++  NK VFD + + LP+ A + GL   P+   L+++
Sbjct:  320 KISVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCRLRPGISILALHGKQQQMRRMEVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDASTYIHRAGRTARYKEGGESLLILLPSEVKGMVHQLSQRKVPVKEIKINPEKLIDIQKKLEAFLAQDQDLKERAQRCFVSYLRSVYLMKNKEVFDVNKLLLPEYALSLGLAVAPRVRFLQRI 537          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A7S0Q7K2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q7K2_9EUKA)

HSP 1 Score: 187 bits (476), Expect = 1.140e-55
Identity = 96/217 (44.24%), Postives = 145/217 (66.82%), Query Frame = 0
Query:    9 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKK 225
            +++L+W FLRTHL+QKS++F ++ K  +F    +  ++PGL V+ LHG++K M+RL VY  F       L ATDVAARGLDF  V+WV+QVDCP+DV TYIHR GRTAR+H  G +L +  P E    L LL+ AK+ +++   +     ++Q K+ + ++   +LKY A+RA++++VRS  +Q NK VFD + ++L +LA + GLP  P+  +L K
Sbjct:   41 KIDLLWGFLRTHLQQKSLVFLSSCKQVKFIHAALSAMQPGLPVLCLHGQMKQMKRLAVYTDFGSKKKGVLLATDVAARGLDFPSVNWVVQVDCPEDVATYIHRTGRTARHHSSGRALVMLLPSELH-MLELLQGAKVPMERLRPNKDKLHSLQGKMRSLLSQRAELKYTAQRAIVAYVRSVKLQANKKVFDVNALNLQELAESVGLPAPPRIRNLNK 256          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: K7G9C0_PELSI (RNA helicase n=4 Tax=Cryptodira TaxID=8464 RepID=K7G9C0_PELSI)

HSP 1 Score: 195 bits (496), Expect = 1.350e-55
Identity = 97/217 (44.70%), Postives = 147/217 (67.74%), Query Frame = 0
Query:    9 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKK 225
            ++N+++SFLR+HL++KSI+FF++ K  ++ F V  RLRPG+SV+ L+GK K M+R+EVY  F+   +A LFATD+AARGLDF  V+WV+Q DCP+D  TYIHRVGRTAR  + G +L +  P E +  +  L   K+ +K+  I+    I++Q K+ A +A + +LK  A+R  +S++RS ++  NK VFD   + L + AH+ GL   P+   L+K
Sbjct:  240 KINMLYSFLRSHLKKKSIVFFSSCKEVQYLFRVFCRLRPGISVLALYGKQKQMKRMEVYNDFVRKKSAVLFATDIAARGLDFPAVNWVIQFDCPEDASTYIHRVGRTARYKEGGEALLILLPSEEKGMVHQLSQRKVPVKEIKINPEKLIDVQKKMQAFLAQEQELKERAQRCFVSYLRSVYLMKNKEVFDVFKLPLAEYAHSLGLAVAPRVRFLQK 456          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: UPI000C8219F2 (LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX10 n=1 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI000C8219F2)

HSP 1 Score: 197 bits (500), Expect = 1.450e-55
Identity = 98/218 (44.95%), Postives = 147/218 (67.43%), Query Frame = 0
Query:    9 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 226
            ++N+++SFLR+HL++KSI+FF++ K  ++ + V  RLRPG+S++ LHG+ + MRR+EVY  F+   AA LFATD+AARGLDF  V+WVLQ DCP+D  TYIHR GRTAR  + G +L +  P E +  +  L   K+ +K+  I+    I++Q K+ + +A D DLK  A+R  +S+VRS ++  +K VFD S + LP  A + GL   P+   L+K+
Sbjct:  309 KINVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFIRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEKGMVQQLLQKKVPVKEIKINQEKLIDVQKKLESFLAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPLPDYALSLGLAVAPRVRFLQKM 526          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: UPI001CFBBC91 (probable ATP-dependent RNA helicase DDX10 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBBC91)

HSP 1 Score: 198 bits (503), Expect = 1.580e-55
Identity = 100/220 (45.45%), Postives = 146/220 (66.36%), Query Frame = 0
Query:    9 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKLGL 228
            ++N+++SF++THL++KSI FFA+ K  +F F V  RLRPG+ V+ LHGK + M+R+EVY  F+   +A LFATD+AARGLDF  V+WVLQ+DCP+D  TYIHRVGRTAR  + G +L V  P E +  +  L + K+ +KK  I+    +N+Q K+ A +A + +LK  A+R  +S++RS F+  NK VFD   +   + A + GL   P+   L+K  L
Sbjct:  294 KINMLFSFMKTHLKKKSIFFFASCKEVQFLFRVFCRLRPGIPVLALHGKQQQMKRMEVYNDFVRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEEKGMVRQLEERKVPIKKIQINPEKILNVQQKLVAFLAQEQELKERAQRCFVSYLRSVFLMKNKEVFDVQKLPFTEYALSLGLAVAPRIRFLQKAWL 513          
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: D0MQZ0_PHYIT (ATP-dependent RNA helicase dbp4, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0MQZ0_PHYIT)

HSP 1 Score: 193 bits (491), Expect = 2.840e-55
Identity = 97/223 (43.50%), Postives = 148/223 (66.37%), Query Frame = 0
Query:    4 SPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 226
            +P   +L+++ SF+++HL+QK+I+F +T +  RF   V  +L+PG+ +  LHGK K  +R+EVY  F+   AA LFATD+AARGLDF  VDWVLQ+DCP+D   YIHRVGRTAR ++ G +L    P E    +  L DAK+ +++T ++     + + KVA+ VA D ++K LA++A +S+VRS ++QP++ VFD + + L   A + GLP  P+   L K+
Sbjct:  287 TPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPTKTSSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAYAESLGLPGAPRMPFLSKM 509          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DZA9_CAFRO6.500e-7154.55Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
R7QCX2_CHOCR1.010e-5745.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A834PIJ2_MARMO3.450e-5643.12Helicase C-terminal domain-containing protein n=6 ... [more]
A0A0L0SBJ3_ALLM34.750e-5645.95Uncharacterized protein n=2 Tax=Allomyces macrogyn... [more]
A0A7N4PZ98_SARHA4.820e-5646.33RNA helicase n=1 Tax=Sarcophilus harrisii TaxID=93... [more]
A0A7S0Q7K2_9EUKA1.140e-5544.24Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
K7G9C0_PELSI1.350e-5544.70RNA helicase n=4 Tax=Cryptodira TaxID=8464 RepID=K... [more]
UPI000C8219F21.450e-5544.95LOW QUALITY PROTEIN: probable ATP-dependent RNA he... [more]
UPI001CFBBC911.580e-5545.45probable ATP-dependent RNA helicase DDX10 n=1 Tax=... [more]
D0MQZ0_PHYIT2.840e-5543.50ATP-dependent RNA helicase dbp4, putative n=2 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025313Domain of unknown function DUF4217SMARTSM01178DUF4217_3coord: 159..222
e-value: 1.1E-12
score: 58.1
IPR025313Domain of unknown function DUF4217PFAMPF13959DUF4217coord: 160..219
e-value: 8.4E-14
score: 51.5
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 36..119
e-value: 3.0E-18
score: 76.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 15..118
e-value: 2.6E-19
score: 69.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 11..166
score: 16.569
NoneNo IPR availableGENE3D3.40.50.300coord: 8..222
e-value: 4.4E-38
score: 133.2
NoneNo IPR availablePANTHERPTHR24031:SF614ATP-DEPENDENT RNA HELICASE DDX10-RELATEDcoord: 9..199
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 9..199
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70200contigM-pyrifera_M_contig70200:75..758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70200.16781.1mRNA_M-pyrifera_M_contig70200.16781.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70200 75..758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70200.16781.1 ID=prot_M-pyrifera_M_contig70200.16781.1|Name=mRNA_M-pyrifera_M_contig70200.16781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
FSPSPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLS
VMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVD
CPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKT
SIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDP
STIDLPQLAHAFGLPKVPKPASLKKLGL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025313DUF4217
IPR001650Helicase_C
IPR027417P-loop_NTPase