mRNA_M-pyrifera_M_contig70200.16781.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A5A8DZA9_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DZA9_CAFRO) HSP 1 Score: 239 bits (611), Expect = 6.500e-71 Identity = 120/220 (54.55%), Postives = 159/220 (72.27%), Query Frame = 1 Query: 13 PPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLK 672 P ++NL+WSF++ HL+Q++I+F ++TK ARF FEV+RRLRPG+ VMELHG++ H +R +Y F+ AA + ATDVAARGLDF G+DWVLQ+DCP+D TYIHRVGRTAR GN L V P EA L LRDAK+ LK+ +I AA A ++Q VAAEVAAD L+YLA+RA S+VRS +QP+ VFD + +D LA ++GLP P+ +L+ Sbjct: 241 PLADKVNLLWSFVKAHLKQRTIVFVSSTKQARFLFEVLRRLRPGVPVMELHGRIAHDKRTAIYSDFLKKKAAVMLATDVAARGLDFPGLDWVLQLDCPEDAATYIHRVGRTARFRMRGNGLLVLLPSEAPAMLQRLRDAKVPLKRITIAAAQARSVQGLVAAEVAADSHLRYLAQRAFASYVRSVMLQPDSEVFDAAELDADALATSYGLPSTPRAKALE 460
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: R7QCX2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX2_CHOCR) HSP 1 Score: 204 bits (520), Expect = 1.010e-57 Identity = 104/228 (45.61%), Postives = 156/228 (68.42%), Query Frame = 1 Query: 1 FSPSPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKLGL 684 F+ P +L+++WSF++THL+ K I+FFAT K RF FE +LRPG+S++ +HG +K M+R ++Y+ F + +AALFATDVA+RGLDF V+WV+QVDCPDDV TY+HRVGRTAR G ++ + S + FL L++ L L +T I+ +I+ ++AA VA++ +LK LA+RA + +V+S + Q ++ VFD ID LA ++GL VPK + K +G+ Sbjct: 333 FAVVPVHDKLSVLWSFIKTHLKSKMIIFFATGKQVRFAFETFCKLRPGMSLLHIHGNMKQMKRTDMYDIFCRTKSAALFATDVASRGLDFPDVEWVVQVDCPDDVGTYVHRVGRTARFKSQGRAMLLLSEGKEEGFLCRLKEKNLELHRTKINPNKVTSIEPRIAATVASNQELKKLAQRAFMFYVKSLYQQSDREVFDIDGIDFRLLAKSYGLSLVPKISFRKAVGV 560
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A834PIJ2_MARMO (Helicase C-terminal domain-containing protein n=6 Tax=Marmota monax TaxID=9995 RepID=A0A834PIJ2_MARMO) HSP 1 Score: 193 bits (491), Expect = 3.450e-56 Identity = 94/218 (43.12%), Postives = 148/218 (67.89%), Query Frame = 1 Query: 25 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 678 ++++++SFLR+HL++KSI+FF++ K ++ + V RLRPG+S++ LHG+ + MRR+EVY F+ AA LFATD+AARGLDF V+WVLQ DCP+D TYIHR GRTAR + G +L + P E + + L K+ +K+ I+ I++Q K+ + +A D DLK A+R +S++RS ++ +K VFD + + +P+ A + GL P+ L+K+ Sbjct: 25 KISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFDVNKLPIPEYALSLGLAVAPRVRFLQKM 242
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A0L0SBJ3_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SBJ3_ALLM3) HSP 1 Score: 201 bits (510), Expect = 4.750e-56 Identity = 102/222 (45.95%), Postives = 146/222 (65.77%), Query Frame = 1 Query: 10 SPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKK 675 +P +L+L+WSF+R HL QKS++F ++ K RF +E R+++PG+ +M +HGK K RL VYE F + A LFATD+AARGLDF V WV+QVD P+D TYIHRVGRTAR GN+L P E + L +L+D SL++ I+ + +++ ++ A + DLKYLA++A ++V+S ++Q NKTVFD + L + A A GLP +PK LKK Sbjct: 290 TPLPDKLDLLWSFIRAHLGQKSLVFLSSCKQVRFVYEAFRKMQPGIPLMHMHGKQKQAARLAVYEAFSKTTACVLFATDIAARGLDFPAVHWVVQVDAPEDAPTYIHRVGRTARYQDGGNALMFLLPSEEQGMLAVLKDKVPSLRRIKINPSKTVDVSTQLEALCSQFTDLKYLAQKAFATYVKSIYLQSNKTVFDVHALPLQEYAAALGLPGMPKVKFLKK 511
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A7N4PZ98_SARHA (RNA helicase n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4PZ98_SARHA) HSP 1 Score: 199 bits (506), Expect = 4.820e-56 Identity = 101/218 (46.33%), Postives = 148/218 (67.89%), Query Frame = 1 Query: 25 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 678 ++++++SFLR+HL++KSI+FFA+ K ++ F V RLRPG+S++ LHGK + MRR+EVY F+ AA LFATD+AARGLDF V+WVLQ DCP+D TYIHR GRTAR + G SL + P E + + L K+ +K+ I+ I+IQ K+ A +A D DLK A+R +S++RS ++ NK VFD + + LP+ A + GL P+ L+++ Sbjct: 320 KISVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCRLRPGISILALHGKQQQMRRMEVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDASTYIHRAGRTARYKEGGESLLILLPSEVKGMVHQLSQRKVPVKEIKINPEKLIDIQKKLEAFLAQDQDLKERAQRCFVSYLRSVYLMKNKEVFDVNKLLLPEYALSLGLAVAPRVRFLQRI 537
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: A0A7S0Q7K2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q7K2_9EUKA) HSP 1 Score: 187 bits (476), Expect = 1.140e-55 Identity = 96/217 (44.24%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 25 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKK 675 +++L+W FLRTHL+QKS++F ++ K +F + ++PGL V+ LHG++K M+RL VY F L ATDVAARGLDF V+WV+QVDCP+DV TYIHR GRTAR+H G +L + P E L LL+ AK+ +++ + ++Q K+ + ++ +LKY A+RA++++VRS +Q NK VFD + ++L +LA + GLP P+ +L K Sbjct: 41 KIDLLWGFLRTHLQQKSLVFLSSCKQVKFIHAALSAMQPGLPVLCLHGQMKQMKRLAVYTDFGSKKKGVLLATDVAARGLDFPSVNWVVQVDCPEDVATYIHRTGRTARHHSSGRALVMLLPSELH-MLELLQGAKVPMERLRPNKDKLHSLQGKMRSLLSQRAELKYTAQRAIVAYVRSVKLQANKKVFDVNALNLQELAESVGLPAPPRIRNLNK 256
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: K7G9C0_PELSI (RNA helicase n=4 Tax=Cryptodira TaxID=8464 RepID=K7G9C0_PELSI) HSP 1 Score: 195 bits (496), Expect = 1.350e-55 Identity = 97/217 (44.70%), Postives = 147/217 (67.74%), Query Frame = 1 Query: 25 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKK 675 ++N+++SFLR+HL++KSI+FF++ K ++ F V RLRPG+SV+ L+GK K M+R+EVY F+ +A LFATD+AARGLDF V+WV+Q DCP+D TYIHRVGRTAR + G +L + P E + + L K+ +K+ I+ I++Q K+ A +A + +LK A+R +S++RS ++ NK VFD + L + AH+ GL P+ L+K Sbjct: 240 KINMLYSFLRSHLKKKSIVFFSSCKEVQYLFRVFCRLRPGISVLALYGKQKQMKRMEVYNDFVRKKSAVLFATDIAARGLDFPAVNWVIQFDCPEDASTYIHRVGRTARYKEGGEALLILLPSEEKGMVHQLSQRKVPVKEIKINPEKLIDVQKKMQAFLAQEQELKERAQRCFVSYLRSVYLMKNKEVFDVFKLPLAEYAHSLGLAVAPRVRFLQK 456
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: UPI000C8219F2 (LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX10 n=1 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI000C8219F2) HSP 1 Score: 197 bits (500), Expect = 1.450e-55 Identity = 98/218 (44.95%), Postives = 147/218 (67.43%), Query Frame = 1 Query: 25 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 678 ++N+++SFLR+HL++KSI+FF++ K ++ + V RLRPG+S++ LHG+ + MRR+EVY F+ AA LFATD+AARGLDF V+WVLQ DCP+D TYIHR GRTAR + G +L + P E + + L K+ +K+ I+ I++Q K+ + +A D DLK A+R +S+VRS ++ +K VFD S + LP A + GL P+ L+K+ Sbjct: 309 KINVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFIRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEKGMVQQLLQKKVPVKEIKINQEKLIDVQKKLESFLAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPLPDYALSLGLAVAPRVRFLQKM 526
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: UPI001CFBBC91 (probable ATP-dependent RNA helicase DDX10 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBBC91) HSP 1 Score: 198 bits (503), Expect = 1.580e-55 Identity = 100/220 (45.45%), Postives = 146/220 (66.36%), Query Frame = 1 Query: 25 RLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKLGL 684 ++N+++SF++THL++KSI FFA+ K +F F V RLRPG+ V+ LHGK + M+R+EVY F+ +A LFATD+AARGLDF V+WVLQ+DCP+D TYIHRVGRTAR + G +L V P E + + L + K+ +KK I+ +N+Q K+ A +A + +LK A+R +S++RS F+ NK VFD + + A + GL P+ L+K L Sbjct: 294 KINMLFSFMKTHLKKKSIFFFASCKEVQFLFRVFCRLRPGIPVLALHGKQQQMKRMEVYNDFVRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEEKGMVRQLEERKVPIKKIQINPEKILNVQQKLVAFLAQEQELKERAQRCFVSYLRSVFLMKNKEVFDVQKLPFTEYALSLGLAVAPRIRFLQKAWL 513
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Match: D0MQZ0_PHYIT (ATP-dependent RNA helicase dbp4, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0MQZ0_PHYIT) HSP 1 Score: 193 bits (491), Expect = 2.840e-55 Identity = 97/223 (43.50%), Postives = 148/223 (66.37%), Query Frame = 1 Query: 10 SPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSVMELHGKVKHMRRLEVYEGFMGSGAAALFATDVAARGLDFSGVDWVLQVDCPDDVETYIHRVGRTARNHQHGNSLAVFSPHEARTFLPLLRDAKLSLKKTSIHAASAINIQAKVAAEVAADPDLKYLAERALISFVRSNFMQPNKTVFDPSTIDLPQLAHAFGLPKVPKPASLKKL 678 +P +L+++ SF+++HL+QK+I+F +T + RF V +L+PG+ + LHGK K +R+EVY F+ AA LFATD+AARGLDF VDWVLQ+DCP+D YIHRVGRTAR ++ G +L P E + L DAK+ +++T ++ + + KVA+ VA D ++K LA++A +S+VRS ++QP++ VFD + + L A + GLP P+ L K+ Sbjct: 287 TPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPTKTSSCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAYAESLGLPGAPRMPFLSKM 509 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70200.16781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70200.16781.1 >prot_M-pyrifera_M_contig70200.16781.1 ID=prot_M-pyrifera_M_contig70200.16781.1|Name=mRNA_M-pyrifera_M_contig70200.16781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp FSPSPPFSRLNLVWSFLRTHLRQKSILFFATTKGARFFFEVVRRLRPGLSback to top mRNA from alignment at M-pyrifera_M_contig70200:75..758- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70200.16781.1 ID=mRNA_M-pyrifera_M_contig70200.16781.1|Name=mRNA_M-pyrifera_M_contig70200.16781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig70200:75..758- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70200:75..758- >mRNA_M-pyrifera_M_contig70200.16781.1 ID=mRNA_M-pyrifera_M_contig70200.16781.1|Name=mRNA_M-pyrifera_M_contig70200.16781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig70200:75..758- (Macrocystis pyrifera P11B4 male)back to top |