prot_M-pyrifera_M_contig70015.16758.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70015.16758.1
Unique Nameprot_M-pyrifera_M_contig70015.16758.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length162
Homology
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BLAST of mRNA_M-pyrifera_M_contig70015.16758.1 vs. uniprot
Match: A0A4P5XM39_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A4P5XM39_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.290e-13
Identity = 51/159 (32.08%), Postives = 82/159 (51.57%), Query Frame = 0 
Query:    7 GVDLSWDLETNADPFVTGVINVFNFTGSTTTFTLNFMQPIAPAVANGVGTGSIALAIQDVFNSGTGSLTSAGGGAIYTPEVDGGVFSAGELLAGTALNVSHA-GETVSTNASFG----PTAVGAVGTSLGLEIEFSLTNLDLATGTSIFEVVEVPEPSS 160
            G  +SW    + DPF+TG  ++ N T     + ++F  PI+P++A    +G ++  + D   SG+ S+TS  GGA+YT   DG       L++     VS A G T  +  SFG    P A  A+ +++G+   F+L+  D  + +SIF    VP P +
Sbjct:   71 GTSMSWSYLVDPDPFITGTFSLTNDTLLAKAYVVDFSLPISPSIAQSTVSGQMSGTLTDSNGSGSASMTSTSGGAVYTALADG--MFVQSLMSNANQTVSSAFGTTSFSGGSFGQGLPPLAGPAINSTIGIRFSFTLSAGDSVSFSSIFVANPVPTPGA 227
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70015.16758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4P5XM39_9BACT4.290e-1332.08Uncharacterized protein n=1 Tax=Phycisphaerae bact... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70015contigM-pyrifera_M_contig70015:2..487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70015.16758.1mRNA_M-pyrifera_M_contig70015.16758.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70015 2..487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70015.16758.1 ID=prot_M-pyrifera_M_contig70015.16758.1|Name=mRNA_M-pyrifera_M_contig70015.16758.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
ATGGSYGVDLSWDLETNADPFVTGVINVFNFTGSTTTFTLNFMQPIAPAV
ANGVGTGSIALAIQDVFNSGTGSLTSAGGGAIYTPEVDGGVFSAGELLAG
TALNVSHAGETVSTNASFGPTAVGAVGTSLGLEIEFSLTNLDLATGTSIF
EVVEVPEPSSAL
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