prot_M-pyrifera_M_contig68747.16533.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68747.16533.1
Unique Nameprot_M-pyrifera_M_contig68747.16533.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length198
Homology
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BLAST of mRNA_M-pyrifera_M_contig68747.16533.1 vs. uniprot
Match: A0A6H5JR49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR49_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 9.190e-8
Identity = 44/188 (23.40%), Postives = 88/188 (46.81%), Query Frame = 0 
Query:    9 DNVEAHYSMWRSKFLAYLSSLGCLHVLSSTANPVMVGDMRVSPEELASRHSPQEIRDARLVYGLMMEAMTGYDMAEFRMQKAMSPSGAWEELEDYYMPKTIAATRRLRREFDTIRMAEDENPLLFLGRVDKAADELVMLGCGKSTEEVNRHIVTNLSSLYTIQSKSILSRPSIPRSEIDEIIRDAYAN 196
            ++++    +++S  +A  +  G   V+ S  + + VG    +  +L ++     +  A   + L++ +++ Y      +    SPSG W     YY P+  A  +RL +E+ +  M   E P  + GR       L   G      E N H+V+ LSS YT++ + + +   +   +I++ ++DAYA+
Sbjct:  148 NDLQQKLLIFKSSMVARFAQEGVHEVVMSDED-IPVGKHGANMAQLRTQFDALRVAKAIAAWNLLISSIS-YMPILSEVVSDGSPSGRWMIFLKYYEPQARAEKKRLLKEYHSFYMKSGEIPQEYFGRFYILRSRLASHGTIYPDNEANDHLVSALSSDYTLERRMLHNMADLTLQKIEQSVKDAYAD 333
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68747.16533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JR49_9PHAE9.190e-823.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 87..179
e-value: 4.3E-9
score: 36.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68747contigM-pyrifera_M_contig68747:367..960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68747.16533.1mRNA_M-pyrifera_M_contig68747.16533.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68747 367..960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68747.16533.1 ID=prot_M-pyrifera_M_contig68747.16533.1|Name=mRNA_M-pyrifera_M_contig68747.16533.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
SQSRPPKFDNVEAHYSMWRSKFLAYLSSLGCLHVLSSTANPVMVGDMRVS
PEELASRHSPQEIRDARLVYGLMMEAMTGYDMAEFRMQKAMSPSGAWEEL
EDYYMPKTIAATRRLRREFDTIRMAEDENPLLFLGRVDKAADELVMLGCG
KSTEEVNRHIVTNLSSLYTIQSKSILSRPSIPRSEIDEIIRDAYANDK
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