prot_M-pyrifera_M_contig68705.16523.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68705.16523.1
Unique Nameprot_M-pyrifera_M_contig68705.16523.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length233
Homology
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BLAST of mRNA_M-pyrifera_M_contig68705.16523.1 vs. uniprot
Match: UPI00148895A7 (hypothetical protein n=1 Tax=Alienimonas chondri TaxID=2681879 RepID=UPI00148895A7)

HSP 1 Score: 76.3 bits (186), Expect = 2.100e-12
Identity = 54/170 (31.76%), Postives = 93/170 (54.71%), Query Frame = 0 
Query:   52 GTSITDVGLGELARASALSNLDLYANPYVTDAGLAKLVDLEELSVLILSDLPITGSGISNFSHLSALRVYDCE--NLSNSAIPEICRLPKLAVLDLSDSRVTDEAMTLVDFTSTVEQLHLGSTRITNTSLPVIAERFPNLQNLTLDKLPGITDEGAPYLARMKKLKQLSI 219
            GTS  D  +G + + ++L  LD+   P V++ GLAKL  L  L VL L  + +  + +S    +  +R  D    N+ ++A+  + +LPKLA L L  S VTD+ ++ +     ++ L L +    + +  +IAE+FP+L++L LD+      EG   L R+ +L+ LS+
Sbjct:  137 GTSFDDAAMGVVGQLTSLERLDISGTP-VSNDGLAKLSGLTNLKVLRLKTVSV--NDLSPVEGMQDMRELDLRFSNVGDAAMDSVAKLPKLATLKLERSAVTDDGLSKLSADQPIKALDLDTGF--SEAPAIIAEKFPDLRSLELDRSDVYGAEGFAPLGRLTELRTLSL 301
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68705.16523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00148895A72.100e-1231.76hypothetical protein n=1 Tax=Alienimonas chondri T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 186..211
e-value: 54.0
score: 8.8
coord: 112..137
e-value: 16.0
score: 13.0
coord: 66..91
e-value: 8.8
score: 15.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 157..233
e-value: 3.4E-11
score: 44.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 28..156
e-value: 4.6E-17
score: 63.5
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 171..219
coord: 69..169
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 37..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68705contigM-pyrifera_M_contig68705:7..705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68705.16523.1mRNA_M-pyrifera_M_contig68705.16523.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68705 7..705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68705.16523.1 ID=prot_M-pyrifera_M_contig68705.16523.1|Name=mRNA_M-pyrifera_M_contig68705.16523.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp
AEFITRFIKVDHSRLSTDSDVTFVGVELPAIDDDFMSVMSRFDNLSGAKF
SGTSITDVGLGELARASALSNLDLYANPYVTDAGLAKLVDLEELSVLILS
DLPITGSGISNFSHLSALRVYDCENLSNSAIPEICRLPKLAVLDLSDSRV
TDEAMTLVDFTSTVEQLHLGSTRITNTSLPVIAERFPNLQNLTLDKLPGI
TDEGAPYLARMKKLKQLSIYGSGISEQAAASLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf