prot_M-pyrifera_M_contig68524.16485.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68524.16485.1
Unique Nameprot_M-pyrifera_M_contig68524.16485.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length318
Homology
BLAST of mRNA_M-pyrifera_M_contig68524.16485.1 vs. uniprot
Match: A0A2D9CEI5_9BACT (Uncharacterized protein n=3 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CEI5_9BACT)

HSP 1 Score: 161 bits (408), Expect = 2.110e-41
Identity = 111/300 (37.00%), Postives = 161/300 (53.67%), Query Frame = 0
Query:   27 AVPVKQVAAPAADIDSGLLMLPDPALSGTRSHSALL---PVVLEAVDGRWTWSMPIEVREAGARVVFLSAEEAAW--NARLI---TPAGGVVSEDAVISRNAVGAATLISHEQIEWVSVDRSFACFQTPPAMNGTWTISISSDDPAAGYVLVDSGSDASMYTHVVERSTLVSKPITLRSQFSDAGQIQSLHADIKSPSGKRIQSSALRDSSEISFVPDETGSYSIRVEARGVGHDGRSLVLTTQQLVHVESQAPALGGMGVDTSDPERIGFGFAPDESARRTIIAAELWGRSDGRMIPVC 318
            A+PVKQV AP +DI+SG++ LP+P   G  S + LL   P   +A DG    + P    +  ARVVFL A   AW  + R I   T     V  DA I +  V     I  + + W    R++     P A     ++ +  ++   G+VL+D  SD S+YT+  +R TLV +P+TL S  SD  +I SL A ++SP G R   +A  D  E+SF PD+ G Y+++V A     +   ++L+TQ L+ VES    LG     T+  ++I   F   ++  RTI+AAE+WGRSD  M+PVC
Sbjct:   24 ALPVKQVVAPPSDIESGIVRLPNPVDLGETSRTLLLEIDPAQADA-DGLVDLAFPFVTGDGRARVVFLPAMPNAWVGDVRSIDARTQREIQVRTDAPIEQPGVS----IVRDPLPWGDAGRTYPAVMLP-ADQREMSVRVQMNERVDGFVLIDQLSDRSLYTYTKQRRTLVGRPVTLASSLSDGSKIVSLSAIVRSPDGSREVINAGVDQQELSFTPDQAGGYAVQVIAEYASDENWPVMLSTQHLIEVESPTTPLGAARASTAG-DQIELVFDDAQTDERTIVAAEVWGRSDAGMVPVC 316          
BLAST of mRNA_M-pyrifera_M_contig68524.16485.1 vs. uniprot
Match: A0A812XYG5_9DINO (CmfA protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XYG5_9DINO)

HSP 1 Score: 162 bits (411), Expect = 4.410e-41
Identity = 109/295 (36.95%), Postives = 163/295 (55.25%), Query Frame = 0
Query:   28 VPVKQVAAPAADIDSGLLMLPDPALSGTRSHSALLPVVLEAVDGRWTWSMPIEVREAGARVVFLSAEEAAWNARLITPAGGVVSEDAVISRNAVGAATLISHEQIEWVSVDRSFACFQTPPAMN-GTWTISISSDDPAAGYVLVDSGSDASMYTHVVERSTLVSKPITLRSQFSDAGQIQSLHADIKSPSGKRIQSSALRDSSEISFVPDETGSYSIRVEARGVGHDGRSLVLTTQQLVHVESQAPALGGMGVDTSDPERIGFGFAPDESARRTIIAAELW----GRSDGRMIPV 317
            +P+KQVAAP +DI +G + LP+ +    RS SALLPV LE   G W+WS+PI + +  AR+V       AW+ +LI P   ++ +    SR   G + L       W++ DR F      P      +T+SI+SD  AAGY+L+D G +  + +    RSTL + PI+++S F++   + +L A+I+SPSG      +  D+  I+FVP+E G Y+IR+ A G  +    +V TTQ L+    +A  L    +  +D   I F F PD + R TI+AAE+W    G  D + IPV
Sbjct:   23 LPIKQVAAPPSDILNGRVQLPELSKLAERSTSALLPVKLEFNQGVWSWSIPITLTDRPARIVLFPESPNAWSHQLIAPNTRLIDQ----SRIEQGTSPLA------WINQDRMFEHMTIQPTQAPAEYTLSITSDHEAAGYILLDHGPEVELTSQPTTRSTLQNHPISIKSSFNNNTTLTNLQAEIRSPSGFVFNEQSSTDT--ITFVPEEAGPYNIRIIATGTQNQ-LPIVRTTQHLIDAAPEAMPLKQPTL-VADDSAIRFQFTPDNANRHTILAAEVWALEWGMHDDQPIPV 303          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68524.16485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2D9CEI5_9BACT2.110e-4137.00Uncharacterized protein n=3 Tax=Phycisphaerae TaxI... [more]
A0A812XYG5_9DINO4.410e-4136.95CmfA protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 173..261
e-value: 1.3E-5
score: 27.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..318
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.812

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68524contigM-pyrifera_M_contig68524:272..1225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68524.16485.1mRNA_M-pyrifera_M_contig68524.16485.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68524 272..1225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68524.16485.1 ID=prot_M-pyrifera_M_contig68524.16485.1|Name=mRNA_M-pyrifera_M_contig68524.16485.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=318bp
MIKWRFLSCVVLGAACSLGANAEPLTAVPVKQVAAPAADIDSGLLMLPDP
ALSGTRSHSALLPVVLEAVDGRWTWSMPIEVREAGARVVFLSAEEAAWNA
RLITPAGGVVSEDAVISRNAVGAATLISHEQIEWVSVDRSFACFQTPPAM
NGTWTISISSDDPAAGYVLVDSGSDASMYTHVVERSTLVSKPITLRSQFS
DAGQIQSLHADIKSPSGKRIQSSALRDSSEISFVPDETGSYSIRVEARGV
GHDGRSLVLTTQQLVHVESQAPALGGMGVDTSDPERIGFGFAPDESARRT
IIAAELWGRSDGRMIPVC
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold