prot_M-pyrifera_M_contig68186.16423.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68186.16423.1
Unique Nameprot_M-pyrifera_M_contig68186.16423.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length135
Homology
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BLAST of mRNA_M-pyrifera_M_contig68186.16423.1 vs. uniprot
Match: A0A1Z5R9K0_SORBI (Uncharacterized protein n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5R9K0_SORBI)

HSP 1 Score: 55.5 bits (132), Expect = 2.530e-6
Identity = 44/133 (33.08%), Postives = 64/133 (48.12%), Query Frame = 0 
Query:    9 VRVPESTVVRDYTALLRDGIGADVKIDACSDEYEGDSAQLFPAHSTILRTRSSHLREALESSLAEGVGGLVMLPDASASAAARMLEWIYTDSMQP--DISPTNATA----LLVAGAAAGEERLVRRCEGVLVK 135
            + VP S +V D   LL  G GAD+       E +G+S   FPAH T+L +RS   R  L   + E     +++ D   +    +L +IYTD++ P  D+S  ++      LLVA      ERL   C  +L K
Sbjct:  157 IDVPPSDLVADMGRLLDQGDGADITF-----EVQGES---FPAHRTVLASRSQVFRAELHGQMKERSVDRIVISDMQPAVFRALLRFIYTDALPPMDDLSKDDSLEITRHLLVAADRYAMERLKLICAQILSK 281
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68186.16423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1Z5R9K0_SORBI2.530e-633.08Uncharacterized protein n=2 Tax=Sorghum bicolor Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 39..133
e-value: 1.1E-8
score: 35.2
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 30..105
score: 10.447
NoneNo IPR availableGENE3D3.30.710.10coord: 4..135
e-value: 7.1E-20
score: 73.4
NoneNo IPR availablePANTHERPTHR26379:SF241coord: 8..133
NoneNo IPR availablePANTHERPTHR26379FAMILY NOT NAMEDcoord: 8..133
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 9..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68186contigM-pyrifera_M_contig68186:3..407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68186.16423.1mRNA_M-pyrifera_M_contig68186.16423.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68186 3..407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68186.16423.1 ID=prot_M-pyrifera_M_contig68186.16423.1|Name=mRNA_M-pyrifera_M_contig68186.16423.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp
PGVDPNVAVRVPESTVVRDYTALLRDGIGADVKIDACSDEYEGDSAQLFP
AHSTILRTRSSHLREALESSLAEGVGGLVMLPDASASAAARMLEWIYTDS
MQPDISPTNATALLVAGAAAGEERLVRRCEGVLVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ_sf