prot_M-pyrifera_M_contig68101.16412.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68101.16412.1
Unique Nameprot_M-pyrifera_M_contig68101.16412.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length151
Homology
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: A0A3M6VQ69_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ69_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.280e-18
Identity = 53/149 (35.57%), Postives = 74/149 (49.66%), Query Frame = 0
Query:    3 VTTCLRCGNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMGRNADQLDDAASVPVLYELTGIVFHHGSGAEAGHYVA 151
            VT CLRC N+S RS+ Y  +   ++   SV D I S    E L G N+Y C  C     A R+ E      P TL++QL+RF  D N G + KL + + I + L+    +    +A+  D+A     +Y L G + H G  A  GHY A
Sbjct:  219 VTKCLRCKNKSMRSSFYYEISLTIKGHKSVDDCIKSYLAAEVLEGENKYFCEHCNTKQCAERFCELEPRALPATLMVQLMRFVYDVNAGRKKKLTDVIEINETLNMTELLRRSGHAEAFDEADDT--VYRLQGYLNHRGKSAHVGHYTA 365          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: F2TZU7_SALR5 (USP domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZU7_SALR5)

HSP 1 Score: 85.5 bits (210), Expect = 1.790e-16
Identity = 51/144 (35.42%), Postives = 69/144 (47.92%), Query Frame = 0
Query:    9 CGNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMGRNADQLDDAASVPV-LYELTGIVFHHGSGAEAGHYVA 151
            C +R ER   +T +   +RNC ++   + +  + E L GAN Y C +C    D  +         P  LV+QL RFD D+  G   K  +    PD LD     A GR A + DDA  VP  +Y L G+V H G  A  GHY +
Sbjct: 1692 CSHRYERDEPFTTIPIAIRNCKTLTQALDNYVQGELLEGANAYKCEKCDAKRDTIK--RTCIKTLPRVLVLQLKRFDYDWERGVPVKFNDYFEFPDELDMGPYTAAGRAAVE-DDAGEVPKEMYRLAGVVVHSGQ-ANGGHYTS 1831          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: A0A6J8D759_MYTCO (Ubiquitinyl hydrolase 1 n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8D759_MYTCO)

HSP 1 Score: 79.3 bits (194), Expect = 2.400e-14
Identity = 48/152 (31.58%), Postives = 75/152 (49.34%), Query Frame = 0
Query:    3 VTTCLRCGNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMGRNADQLDDAASVP---VLYELTGIVFHHGSGAEAGHYVA 151
            VTTC RCG +SER +++  L   ++   ++ + +    + E L G NQY CS C    +A R  +      P  L +QL+RF  D  TG + KL + ++ P+ +D    + +   A        V    V Y LT ++ H G  A +GHY+A
Sbjct:  216 VTTCNRCGTKSERPSTFYELDLSIKGHKTLDESLKDFLQEEKLEGDNQYMCSSCNSKQNATR--KIHLKYLPPVLNLQLLRFVFDKKTGMKKKLNSFIQFPEQIDMTKYLTVNNCAGDPAMPEGVEGNSVTYNLTAVLIHRGPTAYSGHYIA 365          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: A0A7S0CRD3_MICPS (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CRD3_MICPS)

HSP 1 Score: 75.9 bits (185), Expect = 3.660e-13
Identity = 48/157 (30.57%), Postives = 72/157 (45.86%), Query Frame = 0
Query:    9 CGNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFA------------TAVAMGRNA----DQLDDAASVPVLYELTGIVFHHGSGAEAGHY 149
            C +RSER   +  +   VR   ++ + + S    E L   NQ++C  CG   DA +         P TL + L RF+ DY T +RHK+++    P+ LD A            TA   G+      D+ ++     + Y L G+V H G+ A AGHY
Sbjct:  202 CPHRSERVEDFVHVSVEVRGKKNLEESLASYVSGELLEADNQWSCEACGAKRDAVKRSCFRGDALPATLCVHLKRFEFDYETMQRHKIKSRFEFPETLDMAPFTVEALEKLDGTAAEDGKTTAAEEDEKNEKKDTKIEYRLAGVVVHSGT-AFAGHY 357          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: C1EAS2_MICCC (USP domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EAS2_MICCC)

HSP 1 Score: 75.9 bits (185), Expect = 4.090e-13
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = 0
Query:   11 NRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMGRNAD---QLDDAASVPVL--------YELTGIVFHHGSGAEAGHY 149
            +RSER   +  +   VRN   + + + S  + E L   NQ+ C QCG+  DA +       + P TL++ L RF+ DY T +R K+++    P  LD +     G   D   + D  A VP L        Y L G+V H G+ A AGHY
Sbjct: 2008 HRSERLEDFVHVSVDVRNKRDLVESLASYVQGELLESDNQWFCEQCGKKVDAVKRACFSGEKLPNTLLVHLKRFEFDYETMQRLKIKSRFEFPMELDMSPFTVEGIERDASAESDPTAPVPELPLGPDHYRYRLVGVVVHSGT-AFAGHY 2156          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: A0A2R5GS10_9STRA (Ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GS10_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.520e-12
Identity = 43/157 (27.39%), Postives = 79/157 (50.32%), Query Frame = 0
Query:    2 DVTTCLRCGNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMGRN-ADQLDDAASV------PVLYELTGIVFHHGSGAEAGHYVA 151
            +V  CL C   S+R      ++  ++  +++   + + + +E L G +QY CS C    DA R+     ++ P+ L++ L RF  D   G + K+++++ IP+ LDFA    +    ++ L +  S        + Y LT ++ H G+ A +GHY A
Sbjct:  384 NVVKCLNCRKASKRPEDIQEIQVNIKGHSTLQSALEAYAAVERLEGHDQYECSNCNSKQDAERFVR--IAKFPDVLIVLLNRFVWDGKQGTKKKVKDTIEIPESLDFAKNETLRTMLSESLHETISTNMYAASDLAYSLTAVLTHKGASANSGHYTA 538          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: A0A6A7G6T8_9CRUS (Ubiquitin domain containing protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6T8_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 4.580e-12
Identity = 53/162 (32.72%), Postives = 76/162 (46.91%), Query Frame = 0
Query:    1 MDVTTCLRCGNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMGRNADQLD--------DAASVPV-----LYELTGIVFHHGSGAEAGHY 149
            +++  C  CG  SER  S+      V+N  S+A+ +  N   E L G NQY CS+C +  DA +         P TL+I L RF+++Y++    K+   L  P  LD A      R  D+L         D + VP       YEL GI+ H G   ++GHY
Sbjct:  228 VNLVVCQECGFCSERPESFFSYGVEVKNRKSLAEALKFNVEGELLSGGNQYYCSKCQKKVDAVK--RSCVKGLPSTLIINLKRFELNYDSMTHSKINERLSFPLELDMAPYTK--RYFDELQTLNLENPRDQSRVPKSLPSDFYELCGIIVHAGI-VDSGHY 384          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: A0A7S0KUG1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KUG1_MICPS)

HSP 1 Score: 72.4 bits (176), Expect = 6.480e-12
Identity = 48/150 (32.00%), Postives = 71/150 (47.33%), Query Frame = 0
Query:   11 NRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMGRNAD---QLDDAASVPVL--------YELTGIVFHHGSGAEAGHY 149
            +RSER   +  +   VRN   + + + S  + E L   NQ+ C QCG+  DA +       + P TL++ L RF+ DY T +R K+++    P  LD +     G   D   + D  +  P L        Y L G+V H G+ A AGHY
Sbjct:  975 HRSERLEDFVHVSVDVRNKRDLVESLASYVQGELLESDNQWFCEQCGKKVDAVKRACFSGEKLPNTLLVHLKRFEFDYETMQRLKIKSRFEFPMELDMSPFTVEGIERDASAESDPNSPAPELPLGPDHYRYRLAGVVVHSGT-AFAGHY 1123          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: A0A2P6VJD4_9CHLO (Ubiquitin specific peptidase 24 isoform B n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VJD4_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 8.980e-12
Identity = 50/142 (35.21%), Postives = 70/142 (49.30%), Query Frame = 0
Query:   12 RSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLD-FATAVAMGRNADQLDDAASVP---VLYELTGIVFHHGSGAEAGHY 149
            RSER   +  +   VR   ++A+ + S    E + G NQY C + G+  DA +    +  + P TL + L RF+ DY T +R K+++    P  LD F   V     AD  + A   P     YEL G+V H GS A AGHY
Sbjct: 1896 RSERDEPFYQISLDVRGKRTLAESLRSFVSKELMDGQNQYECEELGKKVDAEK--RTLIKELPHTLALHLKRFEWDYETYQRWKVKDRFDFPWELDLFPYTVEGADEADGREPAVKHPRDHYQYELCGVVVHSGS-AFAGHY 2034          
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Match: C1MHG0_MICPC (Predicted protein n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MHG0_MICPC)

HSP 1 Score: 69.3 bits (168), Expect = 7.780e-11
Identity = 53/161 (32.92%), Postives = 74/161 (45.96%), Query Frame = 0
Query:    6 CLRC-GNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQYACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSLRIPDVLDFATAVAMG-------RNADQLDDA-ASVPVL--------YELTGIVFHHGSGAEAGHY 149
            C +C  +RSER   +  +   +RN   + + + S    E L   NQ+ C QCG   DA +       Q P TL + L RF+ DY T +R K+++    P  LD +     G         A+   DA A VP L        Y+L G+V H G+ A AGHY
Sbjct: 1892 CQKCPAHRSEREEDFVNISVDIRNKRDLNESLASYVSGELLEADNQWHCEQCGCNVDAVK--RICFKQLPHTLCVHLKRFEFDYETMQRLKVKDRFEFPMRLDMSPFTVEGIEREAATAEAETAGDAPAPVPELIHPLDHYQYKLVGVVVHSGT-AFAGHY 2049          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68101.16412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M6VQ69_9STRA2.280e-1835.57Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
F2TZU7_SALR51.790e-1635.42USP domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A6J8D759_MYTCO2.400e-1431.58Ubiquitinyl hydrolase 1 n=2 Tax=Mytilus TaxID=6548... [more]
A0A7S0CRD3_MICPS3.660e-1330.57Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
C1EAS2_MICCC4.090e-1333.33USP domain-containing protein n=2 Tax=Micromonas T... [more]
A0A2R5GS10_9STRA3.520e-1227.39Ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=H... [more]
A0A6A7G6T8_9CRUS4.580e-1232.72Ubiquitin domain containing protein (Fragment) n=1... [more]
A0A7S0KUG1_MICPS6.480e-1232.00Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A2P6VJD4_9CHLO8.980e-1235.21Ubiquitin specific peptidase 24 isoform B n=2 Tax=... [more]
C1MHG0_MICPC7.780e-1132.92Predicted protein n=3 Tax=Micromonas pusilla TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 1..151
e-value: 1.1E-28
score: 102.1
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 25..151
NoneNo IPR availablePANTHERPTHR24006:SF660UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 35coord: 25..151
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 69..151
e-value: 3.8E-12
score: 46.2
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 131..149
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..151
score: 18.617
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 3..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68101contigM-pyrifera_M_contig68101:27..788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68101.16412.1mRNA_M-pyrifera_M_contig68101.16412.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68101 27..788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68101.16412.1 ID=prot_M-pyrifera_M_contig68101.16412.1|Name=mRNA_M-pyrifera_M_contig68101.16412.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
MDVTTCLRCGNRSERSTSYTLLRAPVRNCASVADGITSNSRLEFLHGANQ
YACSQCGQLSDAARWHEPVASQAPETLVIQLIRFDMDYNTGERHKLRNSL
RIPDVLDFATAVAMGRNADQLDDAASVPVLYELTGIVFHHGSGAEAGHYV
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf