prot_M-pyrifera_M_contig67997.16402.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67997.16402.1
Unique Nameprot_M-pyrifera_M_contig67997.16402.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length183
Homology
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A813D533_9DINO (TmcB protein n=5 Tax=Sar TaxID=2698737 RepID=A0A813D533_9DINO)

HSP 1 Score: 121 bits (304), Expect = 1.270e-28
Identity = 71/181 (39.23%), Postives = 102/181 (56.35%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPGEV---WFSTGWKCDSGARVAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LS + LFLP ASVL R  AC       W+ T   C S  R+   V+LA LL++F  +S++V A F+DR PGSL+W+AK+HGRV V ++  K LL+ + N +  S +G  LLT  +I +G++W   + R +P + P  N +  A A ++ W     A AQG P  D   +VF+  P    A 
Sbjct:  208 LSVSVLFLPVASVLLRAFACDASAPLGWYGT--SCGSPVRIVATVILAVLLMLFLGVSVFVTATFVDREPGSLTWTAKAHGRVDVGLLLFKFLLTAVVN-IDPSTVGSPLLTGFLIAAGVVWFSAVFRELPHSNPMGNAMAGASAMTFLWATATLAFAQGSPTSDFTGMVFIGLPLAASAG 385          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8DI18_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DI18_CAFRO)

HSP 1 Score: 114 bits (285), Expect = 2.190e-26
Identity = 69/187 (36.90%), Postives = 104/187 (55.61%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGARVAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAI-MILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LSTT LFLP +S+LFR  +C          + W   G  CD+  R+    ++A LLV+F  L+M+VAA F+DR+PGSL W+AKSHGRV + ++  K++L+ ++N    +     L T I +I++ L W   + R +PM  P  N L+A  A ++ W  V   +A   P  D+ ++  L  P   LA 
Sbjct:  150 LSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAA--ARSLGTCIALIITALGWLVALYRELPMLRPVANALRAGSATAFLWASVALLVAMMMPGHDVSVMTLLGIPVAALAG 334          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8EE20_CAFRO (Uncharacterized protein n=8 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE20_CAFRO)

HSP 1 Score: 113 bits (282), Expect = 1.130e-25
Identity = 68/187 (36.36%), Postives = 104/187 (55.61%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGARVAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAI-MILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LSTT LFLP +S+LFR  +C          + W   G  CD+  R+    ++A LLV+F  L+M+VAA F+DR+PGSL W+AKSHGRV + ++  K++L+ ++N    +     L T I +I++ L W   + R +PM  P  N L+A  A ++ W  V   +A   P  D+ ++  +  P   LA 
Sbjct:  150 LSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAA--ARSLGTCIALIITALGWLVALYRELPMLRPVANALRAGSATAFLWASVALLVAMMMPGHDVSVMTLVGIPVAALAG 334          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8DZS9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DZS9_CAFRO)

HSP 1 Score: 111 bits (278), Expect = 3.750e-25
Identity = 65/186 (34.95%), Postives = 104/186 (55.91%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGARVAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LSTT LFLP +S+LFR  +C          + W   G  CD+  R+ V  ++A +L++F  L+M+VAA F++R+PGSL W+AKSHGRV + ++  K+LL+ +FN    +        A+++++ L W   + R +PM  P  N L+A  A ++ W  V   ++   P  D+ ++  L  P   LA 
Sbjct:   88 LSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMVVLGVVAVMLLLFFILAMFVAATFVNRHPGSLRWAAKSHGRVAIALLVAKVLLTAIFNVSPAAARSLGTCIALIVVA-LGWLVALYRELPMLRPVANALRAGSATAFLWASVALLVSNLMPGHDVSVMTLLGIPVAALAG 272          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8ECD4_CAFRO (Uncharacterized protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ECD4_CAFRO)

HSP 1 Score: 111 bits (278), Expect = 3.900e-25
Identity = 65/186 (34.95%), Postives = 104/186 (55.91%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGARVAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LSTT LFLP +S+LFR  +C          + W   G  CD+  R+ V  ++A +L++F  L+M+VAA F++R+PGSL W+AKSHGRV + ++  K+LL+ +FN    +        A+++++ L W   + R +PM  P  N L+A  A ++ W  V   ++   P  D+ ++  L  P   LA 
Sbjct:  150 LSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMVVLGVVAVMLLLFFILAMFVAATFVNRHPGSLRWAAKSHGRVAIALLVAKVLLTAIFNVSPAAARSLGTCIALIVVA-LGWLVALYRELPMLRPVANALRAGSATAFLWASVALLVSNLMPGHDVSVMTLLGIPVAALAG 334          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8CR55_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CR55_CAFRO)

HSP 1 Score: 110 bits (276), Expect = 7.260e-25
Identity = 70/187 (37.43%), Postives = 104/187 (55.61%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGAR-VAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LSTT LFLP +S+LFR   C            W   G  CD+  R V +GV+ A LLV+F  L+ +VAA F+DR PGSL W+AKSHGRV V ++  K++L+ ++N    +  G    T  +I+  L W   + R +PM  P  N L+A  AA++ W  +   +AQ  P+ +I ++  ++ P   +A 
Sbjct:  150 LSTTALFLPVSSLLFRSYTCDAGSSVKGSTNDWLGAGIPCDNVWRMVGLGVV-AVLLVLFFVLASFVAATFVDRRPGSLRWAAKSHGRVAVALLVAKVVLTAIYNVSPVTARGVGT-TVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWASLSLLVAQLMPENNISIVAVMAVPVAAIAG 334          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8CQH5_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CQH5_CAFRO)

HSP 1 Score: 110 bits (275), Expect = 9.860e-25
Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGARVAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFN---TLGESFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LSTT LFLP +S+LFR  +C            W   G  CD+  R+ +   +A LL +F  L+ +VAA F+DR PGSL W+AKSHGRV V ++  K++L+ ++N   T   S +G    T  +I+  L W   + R +PM  P  N L+A  AA++ W  V   +AQ  P+ +I     L  P   LA 
Sbjct:  150 LSTTALFLPVSSLLFRSYSCSAGSSVKGSTNDWLGAGIPCDNEWRLIILGFVAVLLALFFILATFVAATFVDRRPGSLRWAAKSHGRVAVALLMAKVVLTAIYNVSPTAARS-IGT---TVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWANVMLLVAQLMPENNISTTTLLGIPVAALAG 334          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8EE84_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE84_CAFRO)

HSP 1 Score: 110 bits (274), Expect = 1.240e-24
Identity = 73/187 (39.04%), Postives = 101/187 (54.01%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPGEV--------WFSTGWKCDSGAR-VAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDIWLLVFLSTPFVGLAS 178
            LSTT LFLP +S+LFR   C            W   G  CD+  R V +GV+ A LLV+F  L+ +VAA F+DR PGSL W+AKSHGRV V ++  K++L+ ++N    +  G    T  +I+  L W   + R +PM  P  N L+A  AA++ W  V   +AQ  P  DI   V +  P   +A 
Sbjct:   88 LSTTALFLPVSSLLFRSYTCDAGSSVKGSTTDWLGAGIPCDNVWRMVGLGVV-AVLLVLFFVLASFVAATFVDRRPGSLRWAAKSHGRVAVALLVAKVVLTAIYNVSPVTARGVGT-TVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWANVMLLVAQLVPHGDIAAPVIMGVPVAAIAG 272          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A5A8D262_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D262_CAFRO)

HSP 1 Score: 110 bits (274), Expect = 1.340e-24
Identity = 65/172 (37.79%), Postives = 99/172 (57.56%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGARVAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAI-MILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDI 163
            LSTT LFLP +S+LFR  +C          + W   G  CD+  R+    ++A LLV+F  L+M+VAA F+DR+PGSL W+AKSHGRV + ++  K++L+ ++N    +     L T I +I++ L W   + R +PM  P  N L+A  A ++ W  V   +A+  P  D+
Sbjct:  186 LSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAA--ARSLGTCIALIITALGWLVALYRELPMLRPVANALRAGSATAFLWASVALLVAELMPGHDV 355          
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Match: A0A813AZA3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AZA3_9DINO)

HSP 1 Score: 107 bits (267), Expect = 2.260e-24
Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 0
Query:    1 LSTTTLFLPFASVLFRGLACPG--------EVWFSTGWKCDSGAR-VAVGVLLATLLVIFATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGESFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCVCTALAQGFPQLDI 163
            LSTT LFLP +S+LFR   C            W   G  CD+  R V +GV+ A LLV+F  L+ +VAA F+DR PGSL W+AKSHGRV V ++  K++L+ ++N    +  G    T  +I+  L W   + R +PM  P  N L+A  AA++ W  +   +AQ  P+ +I
Sbjct:  206 LSTTALFLPVSSLLFRSYTCDAGSSVKGSTNDWLGAGIPCDNVWRMVGLGVV-AVLLVLFFVLASFVAATFVDRRPGSLRWAAKSHGRVAVALLVAKVVLTAIYNVSPVTARGVGT-TVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWASLSLLVAQLMPENNI 375          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67997.16402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A813D533_9DINO1.270e-2839.23TmcB protein n=5 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
A0A5A8DI18_CAFRO2.190e-2636.90Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EE20_CAFRO1.130e-2536.36Uncharacterized protein n=8 Tax=Cafeteria roenberg... [more]
A0A5A8DZS9_CAFRO3.750e-2534.95Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8ECD4_CAFRO3.900e-2534.95Uncharacterized protein n=6 Tax=Cafeteria roenberg... [more]
A0A5A8CR55_CAFRO7.260e-2537.43Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A5A8CQH5_CAFRO9.860e-2537.57Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A5A8EE84_CAFRO1.240e-2439.04Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A5A8D262_CAFRO1.340e-2437.79Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A813AZA3_9DINO2.260e-2439.53Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31600FAMILY NOT NAMEDcoord: 4..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 158..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 183..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..59
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..182
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 163..182
NoneNo IPR availableTMHMMTMhelixcoord: 41..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67997contigM-pyrifera_M_contig67997:697..1245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67997.16402.1mRNA_M-pyrifera_M_contig67997.16402.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67997 697..1245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67997.16402.1 ID=prot_M-pyrifera_M_contig67997.16402.1|Name=mRNA_M-pyrifera_M_contig67997.16402.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
LSTTTLFLPFASVLFRGLACPGEVWFSTGWKCDSGARVAVGVLLATLLVI
FATLSMWVAAVFIDRNPGSLSWSAKSHGRVHVVVIFIKILLSFLFNTLGE
SFLGHWLLTAIMILSGLLWSWLMVRRMPMTTPAINHLQAAFAASYTWLCV
CTALAQGFPQLDIWLLVFLSTPFVGLASYFLAR
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