prot_M-pyrifera_M_contig67986.16398.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67986.16398.1
Unique Nameprot_M-pyrifera_M_contig67986.16398.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length66
Homology
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BLAST of mRNA_M-pyrifera_M_contig67986.16398.1 vs. uniprot
Match: D8LME5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME5_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.530e-23
Identity = 43/53 (81.13%), Postives = 53/53 (100.00%), Query Frame = 0 
Query:   13 SLDLSVRWDGLVLQNVELRRDFLADLLGLPVDVPHAFIRKAVLHLPWYTLMLG 65
            SLDLS+RW+G+VL++VELRRDFL++LLGLPVDVPHAF+R+AVLHLPWYTL+LG
Sbjct:  194 SLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLG 246
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67986.16398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME5_ECTSI3.530e-2381.13Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 12..63
e-value: 1.1E-7
score: 32.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67986contigM-pyrifera_M_contig67986:873..1070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67986.16398.1mRNA_M-pyrifera_M_contig67986.16398.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67986 873..1070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67986.16398.1 ID=prot_M-pyrifera_M_contig67986.16398.1|Name=mRNA_M-pyrifera_M_contig67986.16398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp
SGGGGGGGGGLDSLDLSVRWDGLVLQNVELRRDFLADLLGLPVDVPHAFI
RKAVLHLPWYTLMLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13_N