prot_M-pyrifera_M_contig67879.16374.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig67879.16374.1
Unique Name	prot_M-pyrifera_M_contig67879.16374.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	37

Homology

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: PSBI_ARATH (Photosystem II reaction center protein I n=8180 Tax=cellular organisms TaxID=131567 RepID=PSBI_ARATH)

HSP 1 Score: 71.6 bits (174), Expect = 5.790e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: H6T0P8_BROMC (Photosystem II protein I (Fragment) n=1 Tax=Brocchinia micrantha TaxID=100679 RepID=H6T0P8_BROMC)

HSP 1 Score: 71.6 bits (174), Expect = 6.470e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:    7 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 42

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: A0A3G6IKX8_9ROSA (Photosystem II reaction center protein I n=1 Tax=Hemiptelea davidii TaxID=63068 RepID=A0A3G6IKX8_9ROSA)

HSP 1 Score: 71.6 bits (174), Expect = 7.030e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:   11 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 46

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: I7GPR8_9BRAS (Photosystem II reaction center protein I n=2 Tax=Pentapetalae TaxID=1437201 RepID=I7GPR8_9BRAS)

HSP 1 Score: 71.6 bits (174), Expect = 7.030e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: W1ILU8_9LAMI (Photosystem II reaction center protein I n=1 Tax=Pinguicula ehlersiae TaxID=192264 RepID=W1ILU8_9LAMI)

HSP 1 Score: 71.6 bits (174), Expect = 7.510e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:   14 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 49

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: A0A0E3D7Q5_GOSTU (Photosystem II reaction center protein I n=10 Tax=rosids TaxID=71275 RepID=A0A0E3D7Q5_GOSTU)

HSP 1 Score: 71.6 bits (174), Expect = 7.680e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:   15 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 50

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: A0A221HN59_9ERIC (Photosystem II reaction center protein I n=27 Tax=Pentapetalae TaxID=1437201 RepID=A0A221HN59_9ERIC)

HSP 1 Score: 71.6 bits (174), Expect = 7.680e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:   15 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 50

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: A0A890CGG0_9MAGN (Photosystem II reaction center protein I n=1 Tax=Helicia nilagirica TaxID=2810017 RepID=A0A890CGG0_9MAGN)

HSP 1 Score: 71.6 bits (174), Expect = 7.680e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:   15 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 50

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: A0A140G1P6_TOBAC (Photosystem II reaction center protein I n=220 Tax=Magnoliopsida TaxID=3398 RepID=A0A140G1P6_TOBAC)

HSP 1 Score: 71.6 bits (174), Expect = 7.860e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:   16 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51

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BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Match: U5TX86_SETIT (Photosystem II reaction center protein I n=61 Tax=Mesangiospermae TaxID=1437183 RepID=U5TX86_SETIT)

HSP 1 Score: 71.6 bits (174), Expect = 7.860e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0

Query:    1 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 36
            MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct:   16 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig67879.16374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
PSBI_ARATH	5.790e-16	100.00	Photosystem II reaction center protein I n=8180 Ta...	[more]
H6T0P8_BROMC	6.470e-16	100.00	Photosystem II protein I (Fragment) n=1 Tax=Brocch...	[more]
A0A3G6IKX8_9ROSA	7.030e-16	100.00	Photosystem II reaction center protein I n=1 Tax=H...	[more]
I7GPR8_9BRAS	7.030e-16	100.00	Photosystem II reaction center protein I n=2 Tax=P...	[more]
W1ILU8_9LAMI	7.510e-16	100.00	Photosystem II reaction center protein I n=1 Tax=P...	[more]
A0A0E3D7Q5_GOSTU	7.680e-16	100.00	Photosystem II reaction center protein I n=10 Tax=...	[more]
A0A221HN59_9ERIC	7.680e-16	100.00	Photosystem II reaction center protein I n=27 Tax=...	[more]
A0A890CGG0_9MAGN	7.680e-16	100.00	Photosystem II reaction center protein I n=1 Tax=H...	[more]
A0A140G1P6_TOBAC	7.860e-16	100.00	Photosystem II reaction center protein I n=220 Tax...	[more]
U5TX86_SETIT	7.860e-16	100.00	Photosystem II reaction center protein I n=61 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003686	Photosystem II PsbI	PFAM	PF02532	PsbI	coord: 1..35 e-value: 1.3E-24 score: 85.8
IPR003686	Photosystem II PsbI	PANTHER	PTHR35772	FAMILY NOT NAMED	coord: 1..36
IPR003686	Photosystem II PsbI	HAMAP	MF_01316	PSII_PsbI	coord: 1..36 score: 17.733
None	No IPR available	PANTHER	PTHR35772:SF4		coord: 1..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..36
None	No IPR available	TMHMM	TMhelix		coord: 7..24
IPR037271	Photosystem II PsbI superfamily	SUPERFAMILY	161041	Photosystem II reaction center protein I, PsbI	coord: 1..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig67879	contig	M-pyrifera_M_contig67879:745..855 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig67879.16374.1	mRNA_M-pyrifera_M_contig67879.16374.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig67879 724..855 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig67879.16374.1 ID=prot_M-pyrifera_M_contig67879.16374.1|Name=mRNA_M-pyrifera_M_contig67879.16374.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=37bp
MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003686	PSII_PsbI
IPR037271	PSII_PsbI_sf