prot_M-pyrifera_M_contig6784.16368.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6784.16368.1
Unique Nameprot_M-pyrifera_M_contig6784.16368.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length99
Homology
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BLAST of mRNA_M-pyrifera_M_contig6784.16368.1 vs. uniprot
Match: A0A6H5JP50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP50_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 3.820e-14
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:    6 QEVSCALAAGSTGPEAFTLLLRLLSNFFDRSDTAASHTKFHNLGVPNGTPFRNFIRTLRGVVPAATGTERVLAPGWRLVCRWSGGQLTSSTPA 98
            Q+V   L  G+TGPEAFTLLLRLLS  FD  D   S  +    GV NGT F +++R  R +V + TG+ERVLAP   +V       ++   P+
Sbjct:  117 QQVKRRLDDGATGPEAFTLLLRLLSEQFDVGDRQESFLRLQEFGVSNGTLFADYLRAFRLLVSSVTGSERVLAPSVSMVLEIVRNSVSKQFPS 209
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BLAST of mRNA_M-pyrifera_M_contig6784.16368.1 vs. uniprot
Match: A0A6H5K3M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M2_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 3.910e-5
Identity = 28/54 (51.85%), Postives = 31/54 (57.41%), Query Frame = 0 
Query:    6 QEVSCALAAGSTGPEAFTLLLRLLSNFFDRSDTAASHTKFHNLGVPNGTPFRNF 59
            Q+V   L  G+TGPEAFTLLLRLL   FD  D   S  +    GV NGT F  F
Sbjct:  181 QQVKRRLDDGATGPEAFTLLLRLLLEQFDVGDRQESFLRLQQFGVSNGTLFVYF 234
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6784.16368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP50_9PHAE3.820e-1444.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3M2_9PHAE3.910e-551.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6784contigM-pyrifera_M_contig6784:1294..2050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6784.16368.1mRNA_M-pyrifera_M_contig6784.16368.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6784 1294..2150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6784.16368.1 ID=prot_M-pyrifera_M_contig6784.16368.1|Name=mRNA_M-pyrifera_M_contig6784.16368.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
GHDQLQEVSCALAAGSTGPEAFTLLLRLLSNFFDRSDTAASHTKFHNLGV
PNGTPFRNFIRTLRGVVPAATGTERVLAPGWRLVCRWSGGQLTSSTPA*
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