prot_M-pyrifera_M_contig67782.16356.1 (polypeptide) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A5A8DHV6_CAFRO (DNA-directed RNA polymerase subunit n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DHV6_CAFRO) HSP 1 Score: 115 bits (287), Expect = 7.130e-31 Identity = 60/116 (51.72%), Postives = 71/116 (61.21%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASE-APPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKENA 115
FC RCG LL L D++ C C F +E L+ + A S RELP WQR+L+ A + KAARA VDEPCPKC H + FYT Q RSADEGQTVF+ECP C H + NA
Sbjct: 6 FCPRCGTLLDLMDSDSATCSGCKFSCRYEDLSTAVLACETHSKQRELPLWQRSLLAPAGGD----GKAARALVDEPCPKCAHSQMFFYTMQMRSADEGQTVFFECPKCGHNYSVNA 117
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A836CG05_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG05_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.560e-29 Identity = 59/116 (50.86%), Postives = 67/116 (57.76%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASEAPPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYEC--PNCKHKFKEN 114
FC CG +L LP+ V CG C E +FE+ E +S R LP W L + E K RATVDE CPKC HP +EFYT Q RSADEGQTVFYEC NC+HKF N
Sbjct: 5 FCPTCGAVLALPEYGDVECGNCKAEMTFESFGKVELIT-QSAPRPLPRWVEELENKGIRE-----KQKRATVDEQCPKCGHPEMEFYTMQLRSADEGQTVFYECLNKNCQHKFSVN 114
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A8J2WLY1_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WLY1_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.780e-27 Identity = 49/114 (42.98%), Postives = 64/114 (56.14%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASEAPPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKEN 114
FCG CG L +P P++C C +AS+ R+ AR P W + +E+ K+ RATV++ CP C H +LEFYT Q RS DEGQTVFYEC C H+F +N
Sbjct: 16 FCGHCGSFLEIPAREPLQCSNCGASCLLNESSASDPLETRTKARAAPAWA-----SGRTEQTIKRKSTRATVEQECPNCGHGILEFYTMQMRSVDEGQTVFYECLECGHRFSQN 124
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A7R9UDQ0_9STRA (DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDQ0_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.040e-26 Identity = 53/114 (46.49%), Postives = 62/114 (54.39%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASEAPPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKEN 114
FC CG +L LP ++CG CA+ E LA S +S R P W + EE RA VDE C KC HP FYT Q RSADEGQTVFYECPNC H++ +N
Sbjct: 52 FCPSCGSMLQLPSEGDLKCGMCAWGCRMEVLARSFKLVTKSPPRAPPAW-------LLQEEQEDVNKRRAKVDEACLKCNHPWTYFYTMQMRSADEGQTVFYECPNCAHRWSQN 158
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A7S2HHJ5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHJ5_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.590e-25 Identity = 50/114 (43.86%), Postives = 61/114 (53.51%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASEAPPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKEN 114
FC CG + LP+ +P+ C C+FET++ L + S R LP W ED AR +E CP+C HP L +YT Q RSADEGQTVFYEC C HKF N
Sbjct: 12 FCPECGSIFKLPNVDPISCSYCSFETTYRELQLPTVITV-SAPRPLPSWA-----AEKKNEDAGTGMARMVSEERCPECDHPELMYYTMQLRSADEGQTVFYECSECNHKFSVN 119
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A830HK12_9CHLO (DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HK12_9CHLO) HSP 1 Score: 101 bits (251), Expect = 5.460e-25 Identity = 55/119 (46.22%), Postives = 64/119 (53.78%), Query Frame = 0
Query: 1 FCGRCGELLVLPDA-NPVRCGKCAFETSFEALAASEAPPMRSTARELPEWQRALVRTAMSEE---DPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKENA 115
FC CG LL LPD + +C C FE +E LA MRST +L + E + + RATVDE CPKC H L++YT Q RSADEGQTVFYEC C HKF N
Sbjct: 34 FCDACGSLLALPDTRDEAKCPACPFERKYETLAKQTPFVMRSTPADLLRRHGVEPLVPLDGEAGKETEARRERATVDELCPKCNHRGLDYYTMQLRSADEGQTVFYECKKCAHKFSVNT 152
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A067CLZ5_SAPPC (DNA-directed RNA polymerase subunit n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CLZ5_SAPPC) HSP 1 Score: 99.4 bits (246), Expect = 1.450e-24 Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASEAPPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKENA 115
FC CG +L LP+ N + C C + ++ L + S R P+W V+ A+ ++ + A RATV+EPCPKC +P +EFYT Q RSADEGQTVFYEC C H++ N
Sbjct: 16 FCPHCGTILDLPETNNIVCSSCGYTCQYQDLP-TLCTVTFSEDRPEPKW----VKNAIVSQEVTGPA-RATVEEPCPKCNNPQMEFYTMQLRSADEGQTVFYECKKCGHRYSVNT 124
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A0N7L402_PLAHL (DNA-directed RNA polymerase subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L402_PLAHL) HSP 1 Score: 99.4 bits (246), Expect = 1.490e-24 Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASEAPPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKEN 114
FC CG +L PD N + C C + ++ L S + +S R LP+W A V MSE ARATV+E CPKC +P +++YT Q RSADEGQTVFYEC C HKF N
Sbjct: 17 FCPHCGTILDHPDTNNIVCSACEYRCRYQDLP-SLSVVTQSEDRPLPKWLDAKV--GMSEVT---GPARATVEETCPKCENPEMDYYTLQLRSADEGQTVFYECKKCGHKFSVN 124
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A5P1EHX3_ASPOF (DNA-directed RNA polymerase subunit n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EHX3_ASPOF) HSP 1 Score: 99.0 bits (245), Expect = 2.110e-24 Identity = 53/118 (44.92%), Postives = 65/118 (55.08%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASE---APPMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKENA 115
FCG CG LL A+ RC C FE + + E A REL ++ T +ED RA V+E CP+C+HP LE+YT+Q RSADEGQTVFYECP C HK+ N
Sbjct: 12 FCGICGTLLSFASADVARCPLCKFERNASEIEGRETRYAITAEDIRRELKLEPFVVLETVEVDED----VQRAVVNEACPQCQHPELEYYTKQLRSADEGQTVFYECPKCGHKYSVNT 125
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Match: A0A6I9R0X7_ELAGV (DNA-directed RNA polymerase subunit n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9R0X7_ELAGV) HSP 1 Score: 98.6 bits (244), Expect = 2.990e-24 Identity = 52/118 (44.07%), Postives = 65/118 (55.08%), Query Frame = 0
Query: 1 FCGRCGELLVLPDANPVRCGKCAFETSFEALAASEAP---PMRSTARELPEWQRALVRTAMSEEDPSHKAARATVDEPCPKCRHPVLEFYTQQTRSADEGQTVFYECPNCKHKFKENA 115
FCG CG LL + +C C F+ + E + E REL L+ TA +E+ RA V+E CP+C HP LE+YT+Q RSADEGQTVFYECP C+HKF N
Sbjct: 11 FCGVCGTLLSFDSLDFAKCPLCGFKRAAEEIEGKETHYTITAEDIRRELKIEPFVLLETAPIDEE---MVQRAVVNESCPQCHHPQLEYYTRQLRSADEGQTVFYECPECRHKFSVNT 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67782.16356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_M-pyrifera_M_contig67782.16356.1 ID=prot_M-pyrifera_M_contig67782.16356.1|Name=mRNA_M-pyrifera_M_contig67782.16356.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bpback to top |