prot_M-pyrifera_M_contig6773.16343.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6773.16343.1
Unique Nameprot_M-pyrifera_M_contig6773.16343.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length321
Homology
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: D7G2P6_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2P6_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 8.060e-136
Identity = 197/234 (84.19%), Postives = 214/234 (91.45%), Query Frame = 0
Query:    1 MNRRNTPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPKNDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRKERPKKGQEAEWRERER 234
            MNRRNTPRGQMSMGKGGPAIQMMEG+MR MF+PPPPLEFKKSVCKR PP V+G+AA+L  +  ANLFEKG PPP EKFETPRQ+HARIA AKKK D EGL ++I+ W+PK+D KTKGDAYKTLF+AKISYDTTEKKLRREFEQ+G I S+RMV DEDGKPRGYAF+EYENEDDMR+AYKRGDGRKIDGRRVLVDVERGRTVRNW PRRFGGGLGDSRKERPKKG EAEWRERER
Sbjct:    1 MNRRNTPRGQMSMGKGGPAIQMMEGAMRAMFEPPPPLEFKKSVCKRKPPTVEGVAAMLKGKGAANLFEKGVPPPPEKFETPRQKHARIAAAKKKTDEEGLKDKISKWNPKDDPKTKGDAYKTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQDEDGKPRGYAFVEYENEDDMRVAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKERPKKGHEAEWRERER 234          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: H6WBA2_VAULI (RRM domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA2_VAULI)

HSP 1 Score: 256 bits (654), Expect = 1.290e-80
Identity = 133/227 (58.59%), Postives = 165/227 (72.69%), Query Frame = 0
Query:    1 MNRRNTPRGQMSMGKG-GPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPKNDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRKERPKKGQE 226
            MNR NTPRG MS G+  GPA+ M+   ++ MFDP PPL +K  + KR  P V G+          ++FEK PPPP   +ETP+QRHAR+  AK + +   +   I  W+PK D    GDAYKTLFVA +SYDT+EKKLRREFEQYG I  +R+V D + +PRGYAFIEYE E+DM +AYK+ DGRK+D RR+LVDVERGRTVRNW+PRRFGGGLG+SRK +PKKG+E
Sbjct:    1 MNRLNTPRGYMSQGRNSGPALGMLPPDLKPMFDPRPPLLWKPPINKRVAPYVTGLVKYK------DVFEKIPPPPIIPYETPKQRHARLREAKIRENEAKIEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVNDLEDQPRGYAFIEYEREEDMHMAYKKADGRKVDSRRLLVDVERGRTVRNWRPRRFGGGLGESRKTKPKKGEE 221          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: A0A7S2Y0A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A0_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.420e-72
Identity = 124/216 (57.41%), Postives = 154/216 (71.30%), Query Frame = 0
Query:    3 RRNTPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPKNDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRK 218
            RR TP+G MS    GPAI  +   ++ MFDP PP+E K  + KR  P + GMA+ +      +LFEK  PPP++ +ETP+QR AR+  A  KA+ E LA     +DP  +     DAYKTLF++++SYDTTEKKLRREFEQYGPI ++R++ D + KPRGYAFIEY+ E DMR+AYKR DG KIDGRRVLVDVERGRTVR W PRR GGGLG +RK
Sbjct:    4 RRMTPKGMMSGNGSGPAIAHLPPGLKAMFDPRPPMEHKPPIIKRKMPSLAGMASYV------DLFEKTEPPPRQIYETPKQRQARVRDATMKANNEALALYAQEFDPHLNPHATEDAYKTLFISRLSYDTTEKKLRREFEQYGPIRNLRIILDLNDKPRGYAFIEYDRESDMRMAYKRADGCKIDGRRVLVDVERGRTVRGWCPRRLGGGLGGTRK 213          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: A0A4D9D1Y9_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Y9_9STRA)

HSP 1 Score: 225 bits (574), Expect = 5.670e-68
Identity = 121/213 (56.81%), Postives = 146/213 (68.54%), Query Frame = 0
Query:    6 TPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPKNDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRK 218
            TP+GQMS     PAI  +  +MR MF+P PP+EF +   K  P    G++        A LFE   PP +E+F + ++R A    A  K  AE +   +  WDPK D K   D YKTL VA++SYDTTEKKLRREFEQYGPI SMR+VTD DGKPRGYAFIE+E E DM++AYKR DG+KIDGRR+LVDVERGRTV+ W PRR GGGLG +RK
Sbjct:   33 TPKGQMSGSNMPPAITGLPQNMRAMFEPRPPVEFLRLAPKPPPRPYTGISQY------AGLFETDEPPARERFLSYKERKAAERAAFMKVHAEKVEMEVEDWDPKKDEKATEDPYKTLMVARLSYDTTEKKLRREFEQYGPIQSMRLVTDADGKPRGYAFIEFERESDMKMAYKRADGKKIDGRRILVDVERGRTVKGWVPRRLGGGLGGTRK 239          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: A0A8K1CMI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMI4_PYTOL)

HSP 1 Score: 221 bits (563), Expect = 9.460e-67
Identity = 115/221 (52.04%), Postives = 152/221 (68.78%), Query Frame = 0
Query:    2 NRRNTPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPKN-DGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRKERP 221
            +R+ TP+GQMS    GPAI  +   ++ +F+P PPLE    + KR  P   G+       E A  FE   PPP+E  ETP++R  R+   K +A    L   +  WDP+  D +   DAYKTLFV +ISY+TTEK+LR+EFEQYGP+  +R++ DE+GK RGYAF+EYE E DM++AYK+ DG+KIDGRRV+VDVERGRTVR WKPR+FGGG+G++RK  P
Sbjct:    4 HRKMTPKGQMSSSGMGPAIVHLPPHLKALFEPNPPLEHLPQLTKRKMPPYSGLT------EFAETFETAQPPPREVSETPKERRERVRKEKVEAHEAQLQANLEKWDPQAADERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKKIRLIEDEEGKSRGYAFVEYEKESDMKVAYKQADGKKIDGRRVVVDVERGRTVREWKPRKFGGGIGETRKGGP 218          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: A0A5D6XVV7_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVV7_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.310e-65
Identity = 120/222 (54.05%), Postives = 153/222 (68.92%), Query Frame = 0
Query:    2 NRRNTPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARI-ATAKKKADAEGLAERIAAWDPKN-DGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRKERP 221
            +R+ TP+GQMS    GPAI  +   ++ +F+P  PLEF+  + KR  P   G+AA       A  FE   PPP+E  ETP++R  R+ A    KADAE LA +   WDP   D +   DAYKTLFV +ISY+TTEK+LR+EFEQYGP+   R+V D DGK RGY F+EYENE D++ AYK  DG+KIDGRRV+VDVERGRTVR+W PR+FGGG+G++RK  P
Sbjct:   13 HRKMTPKGQMSNSGMGPAISHLPVHLKALFEPNAPLEFRPKLVKRKMPPYSGIAAF------AEQFEAEAPPPREVSETPKERRERVRAERMAKADAEMLANKEK-WDPNAPDERKTEDAYKTLFVGRISYETTEKQLRQEFEQYGPVKRARLVEDPDGKSRGYGFVEYENESDLKAAYKLADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRKGGP 227          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: W7TPI8_9STRA (U1 small nuclear ribonucleoprotein 70 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPI8_9STRA)

HSP 1 Score: 214 bits (544), Expect = 4.190e-64
Identity = 111/192 (57.81%), Postives = 134/192 (69.79%), Query Frame = 0
Query:   27 MRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPKNDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRK 218
            MR MF+P PP+EF +   K  P    G++  +       LFE   PPP+E+F + ++R A    A  K  AE +   +  WDPK D K   D YKTL VA++SYDTTEKKLRREFEQYGPI SMR+V D DGKPRGYAFIE+E E DM++AYKR DG+KIDGRR+LVDVERGRTV+ W PRR GGGLG +RK
Sbjct:    1 MRAMFEPRPPVEFLRLAPKPPPRPYTGISQYV------GLFETDEPPPRERFLSYKERKAAERAALMKVHAEKVEMEVEDWDPKKDEKATEDPYKTLMVARLSYDTTEKKLRREFEQYGPIQSMRLVMDADGKPRGYAFIEFERESDMKMAYKRADGKKIDGRRILVDVERGRTVKGWVPRRLGGGLGGTRK 186          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: F0XZV6_AURAN (RRM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZV6_AURAN)

HSP 1 Score: 209 bits (532), Expect = 1.480e-63
Identity = 116/213 (54.46%), Postives = 141/213 (66.20%), Query Frame = 0
Query:   26 SMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPKNDGK-----TKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDED---------------GKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRK 218
            +M+ MF P PPL F++ + KR P    G+AA        +LFE   PP  EK ETPR+R A++   K +A    LA  +AAWDP+         T GDAYKTLFVA++SYDTTEKKLRREFEQ+G I ++R+V + D               G PRGYAF+E+E E DMR AYKR DGRKIDGRRVLVDVERGRTVRNW+PR+ GGGLG +RK
Sbjct:    4 AMKAMFQPGPPLLFREKISKRRPTPYTGVAAYR------DLFETTAPPEPEKNETPRERRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKLRREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYKRADGRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRK 210          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: A0A6G0M502_9STRA (RRM domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M502_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.040e-63
Identity = 112/218 (51.38%), Postives = 147/218 (67.43%), Query Frame = 0
Query:    2 NRRNTPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPK-NDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRK 218
            +R+ TP+GQMS    GPAI  +   +++MF+P  PL+    + KR  P   G+AA L      + FE   PPP+   ETP++R  R    K  A    + E  A WDP   D +   DAYKTLFV +ISY+TTE++LR EFEQYGP+ S+R+V D +GK RGY F+EYE E+DM+ AYK  DG+KIDGRRV+VDVERGRTVR+W PR+FGGG+G++RK
Sbjct:    7 HRKMTPKGQMSSSGMGPAIMHLPTHLKVMFEPNAPLDHLPRLVKRKMPPYTGLAAFL------DAFESETPPPRAVQETPKERRERRRQEKMAAVEAKMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 218          
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Match: A0A6A3TRP9_9STRA (RRM domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3TRP9_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.710e-63
Identity = 112/218 (51.38%), Postives = 147/218 (67.43%), Query Frame = 0
Query:    2 NRRNTPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPEVQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGLAERIAAWDPK-NDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASMRMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRTVRNWKPRRFGGGLGDSRK 218
            +R+ TP+GQMS    GPAI  +   +++MF+P  PL+    + KR  P   G+AA L      + FE   PPP+   ETP++R  R    K  A    + E  A WDP   D +   DAYKTLFV +ISY+TTE++LR EFEQYGP+ S+R+V D +GK RGY F+EYE E+DM+ AYK  DG+KIDGRRV+VDVERGRTVR+W PR+FGGG+G++RK
Sbjct:    7 HRKMTPKGQMSSSGMGPAIMHLPTHLKVMFEPNAPLDHLPRLVKRKMPPYTGLAAFL------DAFESETPPPRAVQETPKERRERRRQEKMAAVEAKMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGIGETRK 218          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6773.16343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2P6_ECTSI8.060e-13684.19RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
H6WBA2_VAULI1.290e-8058.59RRM domain-containing protein n=1 Tax=Vaucheria li... [more]
A0A7S2Y0A0_9STRA1.420e-7257.41Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A4D9D1Y9_9STRA5.670e-6856.81RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A8K1CMI4_PYTOL9.460e-6752.04Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XVV7_9STRA2.310e-6554.05RRM domain-containing protein n=1 Tax=Pythium bras... [more]
W7TPI8_9STRA4.190e-6457.81U1 small nuclear ribonucleoprotein 70 n=1 Tax=Nann... [more]
F0XZV6_AURAN1.480e-6354.46RRM domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A6G0M502_9STRA4.040e-6351.38RRM domain-containing protein n=1 Tax=Phytophthora... [more]
A0A6A3TRP9_9STRA4.710e-6351.38RRM domain-containing protein n=1 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..270
NoneNo IPR availablePANTHERPTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDcoord: 27..316
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 122..194
e-value: 6.7E-25
score: 98.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 123..191
e-value: 5.0E-19
score: 67.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 121..198
score: 18.99
IPR022023U1 small nuclear ribonucleoprotein of 70kDa N-terminalPFAMPF12220U1snRNP70_Ncoord: 30..112
e-value: 4.7E-11
score: 43.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 81..214
e-value: 1.5E-26
score: 94.9
IPR040252U1 small nuclear ribonucleoprotein 70kDaPANTHERPTHR13952:SF5U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDAcoord: 27..316
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 109..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6773contigM-pyrifera_M_contig6773:438..12484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6773.16343.1mRNA_M-pyrifera_M_contig6773.16343.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6773 438..12484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6773.16343.1 ID=prot_M-pyrifera_M_contig6773.16343.1|Name=mRNA_M-pyrifera_M_contig6773.16343.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=321bp
MNRRNTPRGQMSMGKGGPAIQMMEGSMRMMFDPPPPLEFKKSVCKRTPPE
VQGMAALLHSEEGANLFEKGPPPPKEKFETPRQRHARIATAKKKADAEGL
AERIAAWDPKNDGKTKGDAYKTLFVAKISYDTTEKKLRREFEQYGPIASM
RMVTDEDGKPRGYAFIEYENEDDMRLAYKRGDGRKIDGRRVLVDVERGRT
VRNWKPRRFGGGLGDSRKERPKKGQEAEWRERERAEEAAREAEREEKREK
ERQEERERREREREEREKNRPPAKDGRDRDDGDGKRSDSRDRGRRGGSRD
RSRDRSRDRSRDRSRDRSRDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR022023U1snRNP70_N
IPR012677Nucleotide-bd_a/b_plait_sf
IPR040252SNRNP70
IPR035979RBD_domain_sf