prot_M-pyrifera_M_contig6761.16314.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6761.16314.1
Unique Nameprot_M-pyrifera_M_contig6761.16314.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length228
Homology
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BLAST of mRNA_M-pyrifera_M_contig6761.16314.1 vs. uniprot
Match: A0A6H5L257_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L257_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 3.230e-48
Identity = 98/121 (80.99%), Postives = 102/121 (84.30%), Query Frame = 0 
Query:  112 LNPAQIAMAAARNLGVHSALPAQAGQGLSGLGASA--GYQANPQLLAQLMRPAHQQXXXXXAAPAQFSLPLGAGA--VPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ 228
            LNPAQIA+AAARNLGV SALP QA  GLSGLGA+   G+QANPQLLAQ+MR A QQ       P QFSLPLGAGA  VPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ
Sbjct:   31 LNPAQIALAAARNLGVPSALPGQAAGGLSGLGAAGAGGFQANPQLLAQVMRSAQQQA----GTPGQFSLPLGAGAGAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ 147
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BLAST of mRNA_M-pyrifera_M_contig6761.16314.1 vs. uniprot
Match: D7FHG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG0_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 3.460e-47
Identity = 98/121 (80.99%), Postives = 102/121 (84.30%), Query Frame = 0 
Query:  112 LNPAQIAMAAARNLGVHSALPAQAGQGLSGLGASA--GYQANPQLLAQLMRPAHQQXXXXXAAPAQFSLPLGA--GAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ 228
            LNPAQIA+AAARNLGV SALP QA  GLSGLGA+   G+QANPQLLAQ+MR A QQ       P QFSLPLGA  GAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ
Sbjct:  132 LNPAQIALAAARNLGVPSALPGQAAGGLSGLGAAGAGGFQANPQLLAQVMRSAQQQA----GTPGQFSLPLGAAAGAVPGMLGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ 248
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BLAST of mRNA_M-pyrifera_M_contig6761.16314.1 vs. uniprot
Match: A0A7S0G8A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8A8_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.780e-5
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:  183 GAVPGMLGGMGMGMG-----DKTVRELFVGNTPQGTSDFVLLEFLNAAMKQ 228
            G VPGM+  M M        DK +RELFVGNTPQGTS+ +L EFLN AM++
Sbjct:   83 GGVPGMMMNMMMATPMTNPQDKVMRELFVGNTPQGTSEILLREFLNGAMRR 133
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6761.16314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L257_9PHAE3.230e-4880.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG0_ECTSI3.460e-4780.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0G8A8_9STRA8.780e-556.86Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 3..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6761contigM-pyrifera_M_contig6761:5435..9811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6761.16314.1mRNA_M-pyrifera_M_contig6761.16314.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6761 5435..9811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6761.16314.1 ID=prot_M-pyrifera_M_contig6761.16314.1|Name=mRNA_M-pyrifera_M_contig6761.16314.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
RSRSRERRRRRSRSDSRERSGRKHRRRSRSNEKHHRRSRRDSSRERRGSG
RRSRSRSGSDSDYGRGRSRSRSGDKSSAAKNPHLGLGEPRRRGLTCRTLS
TVVAIHTATNHLNPAQIAMAAARNLGVHSALPAQAGQGLSGLGASAGYQA
NPQLLAQLMRPAHQQQQQQQAAPAQFSLPLGAGAVPGMLGGMGMGMGDKT
VRELFVGNTPQGTSDFVLLEFLNAAMKQ
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