prot_M-pyrifera_M_contig674.16285.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig674.16285.1
Unique Nameprot_M-pyrifera_M_contig674.16285.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length512
Homology
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: A0A6H5KYC8_9PHAE (RNase III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYC8_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 2.790e-155
Identity = 278/452 (61.50%), Postives = 309/452 (68.36%), Query Frame = 0
Query:    1 MATEDGTALLA-TVPTVERALGYRFRDQRLLLTALTHRSFCHENNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTKILADCFEAVLGAVYVDAGGCSDLEPVHGILARVIPSYEHGRR---STNQPRQQRPRCSRAQFVEEPQRIQAEEPRKLMNLVHRLTQMAKRLAD---GSTGVPA------APGSPYLARLTAGAQRDPIEVLRHFDAHLRSFHENSLRGGALSFSSRAFMEAFGQDVARFFEAAASD-PVKCRHLDDVLAGSSMLRKHFAEAPLGAERVVMEVVPVPSEVRLHCFTVVEFLLTNVLR-QGG--EPGQH-VVRLIESAPHGAATIAFLSKAVAETATSLLLTGRQRTVVRDGLNVETIEA 434
            MA  D +  L  ++P VE ALGYRF D+RLLLTALTHRSFC+E +TASGDFDELEWLGDSVLQLAVSSWLF SA+GSRRSSGQLS TRQRFVD+ ACESFA +LNL                                LP+LRIG GQPV GTKILADCFEAVLGAVYVDAGGCSDLEP+H ILARVIPSY+H RR       P  + P       +E P    AE PRKLMNL HRLTQ+AKR AD   G  G  A      AP SP L+R   G+ RDP+EV+R FD  LR F  N LRGGALSFSSRAF  AFG+D ARFF A A+  P +C  LD VL GSSMLRKHF  AP GAERVVMEVV VPSE+RL  FTVVEFLL NVL+ QGG  EP  + V+RLI SAPHG ATIAFLS  V ETAT+LLL   QR  +  G+ +  + A
Sbjct:    1 MAARDESVFLQHSLPVVEHALGYRFGDRRLLLTALTHRSFCNETHTASGDFDELEWLGDSVLQLAVSSWLFRSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL--------------------------------LPYLRIGHGQPVGGTKILADCFEAVLGAVYVDAGGCSDLEPIHAILARVIPSYKHDRRLQVPRQPPHPRHPHSHPHGAMEPPPGPPAEGPRKLMNLAHRLTQIAKRDADRVEGGGGRAAQPMQGDAPASPPLSRAANGSDRDPLEVVREFDGRLRDFQGNVLRGGALSFSSRAFAGAFGEDEARFFSAVATGCPERCALLDSVLDGSSMLRKHFDGAPPGAERVVMEVVLVPSELRLQTFTVVEFLLNNVLQPQGGSGEPADNPVLRLIRSAPHGDATIAFLSSIVTETATNLLLNAHQRATISAGVALAPLPA 420          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: A0A835Z0E4_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E4_9STRA)

HSP 1 Score: 134 bits (338), Expect = 6.550e-30
Identity = 86/199 (43.22%), Postives = 108/199 (54.27%), Query Frame = 0
Query:    4 EDGTALLATVPTVERALGYRFRDQRLLLTALTHRSFCHENNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGT--KILADCFEAVLGAVYVDAGGCSD---LEPVHGILARVIPSYEHGRRST 197
            ED  AL   VP  E AL Y F ++ LLL ALTHRS+C+EN TA+GD D LEWLGDSVLQ A+S WL++S   + RS  +L+  RQ+FVD  AC  +A  L L                                   +R G GQ  RGT  K+ ADCFEAVLGA+Y+D+   S      P+  +LA VIP++   R ST
Sbjct:  383 EDVKALQQLVPAAEAALRYTFSNKLLLLQALTHRSYCNENRTATGDNDALEWLGDSVLQHAISDWLYNSF--AERSVHKLTDLRQQFVDTTACADYASRLGLP--------------------------------DMMRTGHGQATRGTNTKVSADCFEAVLGAMYLDSRSMSPDAPFVPIFRVLADVIPAFTGARDST 547          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: A0A835ZIJ8_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 3.570e-22
Identity = 73/189 (38.62%), Postives = 99/189 (52.38%), Query Frame = 0
Query:    5 DGTALLATVPTVERALGYRFRDQRLLLTALTHRSFCHENNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTKILADCFEAVLGAVYVD---AGGCSDLEPVHGILARVIPSY 190
            D   L + VP  E ALGY F DQ LLL ALT +S+ +E  +A+GD   +EWLGD VLQ AVS WL++S   + R  G+++  R+ +VD  AC  +A  L L R +       RT  G++  +TS                        K+ AD FEAVLGAV++D   A   +   PV  ILA+VI  +
Sbjct:   56 DEEGLQSLVPAAEEALGYEFLDQMLLLQALTLKSYVNEVESATGDNGAMEWLGDCVLQHAVSDWLYTSTAATHRQEGRMTERRKAYVDTTACARYAQCLGLPRLL-------RTGAGASASLTS-----------------------RKVQADAFEAVLGAVHLDCRDAAAAAVPSPVVRILAKVIRGF 214          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: UPI001A9A005C (ribonuclease III n=1 Tax=Comamonas denitrificans TaxID=117506 RepID=UPI001A9A005C)

HSP 1 Score: 88.2 bits (217), Expect = 3.380e-16
Identity = 65/175 (37.14%), Postives = 85/175 (48.57%), Query Frame = 0
Query:   16 VERALGYRFRDQRLLLTALTHRSFCHENNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTK----ILADCFEAVLGAVYVDAGGCSDLEPVHGILARV 186
            +++ LGYRF+D RLL  ALTHRSF  ++N      + LE+LGDSVL LA+SSWL+     S    G LS  R   V  G+    AL L L                                   LR+G+G+   G K    ILAD  EA+LGAVY++AG     + VH + A+V
Sbjct:    8 LQQRLGYRFQDTRLLQRALTHRSFSSDHN------ERLEFLGDSVLGLAISSWLYHKLADSPE--GDLSRARANLVKEGSLYQLALGLGLPE--------------------------------LLRLGEGEARSGGKRRPSILADAVEAILGAVYLEAGFPVAEQVVHQLFAKV 142          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: A0A1H3G5D1_9BACL (Ribonuclease 3 n=2 Tax=Thermoactinomycetaceae TaxID=186824 RepID=A0A1H3G5D1_9BACL)

HSP 1 Score: 85.9 bits (211), Expect = 2.450e-15
Identity = 64/178 (35.96%), Postives = 90/178 (50.56%), Query Frame = 0
Query:   16 VERALGYRFRDQRLLLTALTHRSFCHENNTASG--DFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTK----ILADCFEAVLGAVYVDAGGCSDLEPVHGILARVI 187
            +E+A G RFR++ L   A TH S+ HE   +    D + LE+LGD+VL+LAVS +LF   +  + S G+L+  R R V   +  SFA ELN                GS                 F+R+G+G+ + G +    +LAD FEA +GAVY+D G    LEP    L RV+
Sbjct:    6 LEQATGIRFRNRELFQQAFTHTSYAHERKNSGHIPDNERLEYLGDAVLELAVSEFLFHYDQ--KMSEGELTRRRARIVCEPSLASFAKELNF---------------GS-----------------FVRLGKGEELTGGRTRPSLLADVFEAFIGAVYLDQG----LEPARTFLQRVV 145          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: RNC_PARUW (Ribonuclease 3 n=8 Tax=Candidatus Protochlamydia TaxID=282132 RepID=RNC_PARUW)

HSP 1 Score: 85.5 bits (210), Expect = 3.790e-15
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 0
Query:    9 LLATVPTVERALGYRFRDQRLLLTALTHRSFCHENNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTK-ILADCFEAVLGAVYVDAG 171
            ++   P +E  LGY F+D +LL+ A  HRSF +EN   +   + LE+LGDSVL + +S +L+      +   GQLS  R R V+A +C  +   L+L                S Y++   G     G             RG + ILAD FEA++GA+Y+D G
Sbjct:   14 VIRQAPAIEAKLGYTFKDPQLLVLAFVHRSFINENREVNQHNERLEFLGDSVLGMLISDYLYCKLP--KTPEGQLSYLRSRLVEASSCVHYIQSLDL----------------SGYLLLGKGERMNDG-------------RGRESILADLFEAIIGAIYLDGG 146          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: A0A1H8E922_9BACL (Ribonuclease 3 n=1 Tax=Lihuaxuella thermophila TaxID=1173111 RepID=A0A1H8E922_9BACL)

HSP 1 Score: 85.1 bits (209), Expect = 4.020e-15
Identity = 64/178 (35.96%), Postives = 90/178 (50.56%), Query Frame = 0
Query:   16 VERALGYRFRDQRLLLTALTHRSFCHE--NNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTK----ILADCFEAVLGAVYVDAGGCSDLEPVHGILARVI 187
            +E+A G  FR+++L   A TH SF HE  N+ A  D + LE+LGD+VL+LAVS +LFS   G   S G+L+ TR R V   +  SFA EL   R                                F+R+G+G+ + G +    +LAD FEA +GA+Y+D G    L+ V   L  V+
Sbjct:    6 LEQATGLTFRNKKLFQQAFTHTSFAHERKNHGAHPDNERLEFLGDAVLELAVSEYLFSRFPG--MSEGELTRTRARVVCEPSLASFAKELEFGR--------------------------------FVRLGKGEEMTGGRTRPSLLADLFEAFIGALYLDQG----LDGVKNFLYTVV 145          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: A0A7C1H438_9DELT (Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1H438_9DELT)

HSP 1 Score: 84.0 bits (206), Expect = 1.170e-14
Identity = 62/183 (33.88%), Postives = 89/183 (48.63%), Query Frame = 0
Query:   16 VERALGYRFRDQRLLLTALTHRSFCHENNTAS-GDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGT-KILADCFEAVLGAVYVDAGGCSDLEPVHGILARVIPSYEHGRRS 196
            +E+ L YRF D+ LL TALTHRSF +EN + S  D + LE+LGD+VL L VS  L    + S  + GQLS  R   V+       A++ N+                  Y++   G ++  G             RG   +LA+C EAV+GA+Y+D    SD +  H  + R+I    H + S
Sbjct:   12 LEKTLQYRFEDKSLLSTALTHRSFINENASYSFSDNERLEFLGDAVLGLCVSDILVK--KFSDLAEGQLSKLRSHLVNESFLAGLAIDFNI----------------GDYLLLGHGEERSGG-------------RGKISLLANCMEAVIGAIYMD----SDFKKAHSFVKRIISPSLHSKSS 159          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: UPI0004903D1B (ribonuclease III n=1 Tax=Desulfocurvus vexinensis TaxID=399548 RepID=UPI0004903D1B)

HSP 1 Score: 83.6 bits (205), Expect = 1.620e-14
Identity = 62/185 (33.51%), Postives = 91/185 (49.19%), Query Frame = 0
Query:   15 TVERALGYRFRDQRLLLTALTHRSFCHENNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTK----ILADCFEAVLGAVYVDAGGCSDLEPVHGILARVIPSYEHGRR 195
            T+++ + +RF   + L TALTH SF +E+  A  D + LE+LGD+VL+L VS  L+   R      G+L+  R R V   A  + A EL L                          D+       LR+G+G+ ++G +    +LAD FEAVLGAV++D G  +    V GI A  +P+    RR
Sbjct:    7 TLQKVISHRFSQVKHLETALTHSSFANEHEEAQQDNERLEFLGDAVLELGVSEMLYE--RSPEAPEGELTRMRARLVSEPALAALARELGL--------------------------DE------LLRLGRGEEMQGGRTRDALLADAFEAVLGAVFLDGGYEAARAAVRGIYASRLPAPGETRR 157          
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Match: A0A2D8Z5Z4_9BACT (Ribonuclease 3 n=4 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2D8Z5Z4_9BACT)

HSP 1 Score: 83.2 bits (204), Expect = 1.750e-14
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   16 VERALGYRFRDQRLLLTALTHRSFCHENNTASGDFDELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFALELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVRGTKILADCFEAVLGAVYVDA 170
            +++ +GY FR++ LL+ ALTH S  +EN + S D   LE+LGD+VLQL +++ LF   R      GQL+  R R V   A E +AL +NL                  +I+   G ++  G               T ILAD FEA++GA+Y+D+
Sbjct:    4 LQQDIGYNFRNEALLVEALTHPSLAYENPSESSDNQRLEFLGDAVLQLVLTNDLFE--RFPEFPEGQLTKLRSRLVSTSALEEYALNINL----------------GNHILLGKGEEKSGGR------------ERTGILADAFEALIGAIYLDS 128          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig674.16285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYC8_9PHAE2.790e-15561.50RNase III domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z0E4_9STRA6.550e-3043.22RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZIJ8_9STRA3.570e-2238.62RNase III domain-containing protein n=1 Tax=Tribon... [more]
UPI001A9A005C3.380e-1637.14ribonuclease III n=1 Tax=Comamonas denitrificans T... [more]
A0A1H3G5D1_9BACL2.450e-1535.96Ribonuclease 3 n=2 Tax=Thermoactinomycetaceae TaxI... [more]
RNC_PARUW3.790e-1533.54Ribonuclease 3 n=8 Tax=Candidatus Protochlamydia T... [more]
A0A1H8E922_9BACL4.020e-1535.96Ribonuclease 3 n=1 Tax=Lihuaxuella thermophila Tax... [more]
A0A7C1H438_9DELT1.170e-1433.88Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacteri... [more]
UPI0004903D1B1.620e-1433.51ribonuclease III n=1 Tax=Desulfocurvus vexinensis ... [more]
A0A2D8Z5Z4_9BACT1.750e-1434.84Ribonuclease 3 n=4 Tax=Verrucomicrobiales TaxID=48... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 28..195
e-value: 3.5E-25
score: 99.7
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 52..171
e-value: 8.5E-15
score: 55.3
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 13..171
score: 25.254
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10coord: 12..183
e-value: 6.3E-30
score: 105.8
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 15..188
NoneNo IPR availablePANTHERPTHR11207RIBONUCLEASE IIIcoord: 11..262
NoneNo IPR availablePANTHERPTHR11207:SF0RIBONUCLEASE 3coord: 11..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig674contigM-pyrifera_M_contig674:9084..17895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig674.16285.1mRNA_M-pyrifera_M_contig674.16285.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig674 9084..17895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig674.16285.1 ID=prot_M-pyrifera_M_contig674.16285.1|Name=mRNA_M-pyrifera_M_contig674.16285.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=512bp
MATEDGTALLATVPTVERALGYRFRDQRLLLTALTHRSFCHENNTASGDF
DELEWLGDSVLQLAVSSWLFSSARGSRRSSGQLSLTRQRFVDAGACESFA
LELNLVRAIKNSVEQQRTTRGSTYIITSCGHDQESGPLPFLRIGQGQPVR
GTKILADCFEAVLGAVYVDAGGCSDLEPVHGILARVIPSYEHGRRSTNQP
RQQRPRCSRAQFVEEPQRIQAEEPRKLMNLVHRLTQMAKRLADGSTGVPA
APGSPYLARLTAGAQRDPIEVLRHFDAHLRSFHENSLRGGALSFSSRAFM
EAFGQDVARFFEAAASDPVKCRHLDDVLAGSSMLRKHFAEAPLGAERVVM
EVVPVPSEVRLHCFTVVEFLLTNVLRQGGEPGQHVVRLIESAPHGAATIA
FLSKAVAETATSLLLTGRQRTVVRDGLNVETIEATSSIGDHTPREVHPPP
PPVGLSGGFTHPPPVFHQPGGPRGALPRDVPWVEPRGHPRGGLWERGRGR
GRQHRGRRGGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR036389RNase_III_sf