prot_M-pyrifera_M_contig67387.16283.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67387.16283.1
Unique Nameprot_M-pyrifera_M_contig67387.16283.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length186
Homology
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A7J7RVS6_PIPKU (Exonuclease 3'-5' domain containing 3 n=8 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7RVS6_PIPKU)

HSP 1 Score: 87.0 bits (214), Expect = 1.450e-16
Identity = 69/193 (35.75%), Postives = 101/193 (52.33%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEW---HDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALV----ALARRVARLVHPFQAARDEEGGGEGVVSSP 186
            SLLQLAV G  +++DLLTL+  + + +    G      L+  L+ + ++ K+G+G+AGD  RL  + P LA A +++   ++    H+ I+ AA   P +A   E         RGL+  V   LG PL K QQ S+W  RPL+  QL YAA DA  L+    AL  + AR+  P   AR  E  G    ++P
Sbjct:  414 SLLQLAVRGRVLLLDLLTLSRPEAQAARALCG------LVSRLLSDPSVTKLGYGMAGDLKRLAAACPALAHAPQQLQGGLDLQLVHERIREAAGPAPGEARAPEP--------RGLSLLVQWVLGRPLDKAQQLSNWDRRPLAEGQLLYAAADAYCLLEVYWALCSQPARVHLPGDLARSPEPPGPQEAAAP 592          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A1Q9DP09_SYMMI (Exonuclease mut-7-like n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DP09_SYMMI)

HSP 1 Score: 82.0 bits (201), Expect = 8.400e-15
Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRV 162
            S LQLAV    ++ DLL LA A K  ++  S       +L  L     +VK+GFGL  D  RL  S+P L   FR +   ++  +++         +A  S+G         GL+A    F+G+PL K  QTSDW +RPLS  QL+YAA DA  L+ LARR+
Sbjct: 1186 STLQLAVEDFIVIFDLLALAPAGKSTAQMLSA------VLASLFCHRGIVKLGFGLQNDLQRLAASYPHLEC-FRRILGTLDLQEVLM--------EARRSKGQTT------GLSALCLEFIGSPLSKRLQTSDWGARPLSREQLSYAALDAHCLLTLARRL 1326          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A812JDC3_9DINO (EXD3 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812JDC3_9DINO)

HSP 1 Score: 82.0 bits (201), Expect = 8.600e-15
Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRV 162
            S LQLA     ++ DLL LA A+K  ++  S       +L  L     +VK+GFGL  D  RL  S+P L   FR +   ++  +++         +A  S+G         GL+A    FLG+PL K  QTSDW +RPLS  QL+YAA DA  L+ LARR+
Sbjct: 1674 STLQLAAEDFIVIFDLLALAPAEKSTAQMLS------TVLASLFCHRGIVKLGFGLQNDLQRLAASYPHLEC-FRRILGTLDLQEVLM--------EARRSKGQTT------GLSALCLEFLGSPLSKRLQTSDWGARPLSREQLSYAALDAHCLLTLARRL 1814          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5A8DB93_CAFRO (3'-5' exonuclease domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DB93_CAFRO)

HSP 1 Score: 79.7 bits (195), Expect = 1.590e-14
Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGG--------SGE-GGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVE--KAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALA 159
            S LQLA  G + V+DLL L       ++G         SG+     E L  +M + ++VKVG+GL+GD A++  SH +L      + P+++  D +   A      A G     E   A  A GL+ AV   LG  L K +QTSDWQ R LS AQ+ YAA DA+A   LA
Sbjct:   48 STLQLATLGRSWVVDLLALHAEAVAGADGALPPPWHVPSGDLSRAVEALSAVMADPSVVKVGWGLSGDLAKVAASHCFLLRPLHVVEPILDLRDALGTLAR-----AAGEAAPAELCAAADASGLSNAVREVLGGRLSKKEQTSDWQRRELSVAQIRYAAIDALATAHLA 212          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5N4EB12_CAMDR (Exonuclease mut-7-like protein n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4EB12_CAMDR)

HSP 1 Score: 80.9 bits (198), Expect = 1.880e-14
Identity = 65/170 (38.24%), Postives = 89/170 (52.35%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATM--VPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALV----ALARRVAR 164
            SL+Q+AV G   ++DL  L +       GG        L+  L+ E +++K+G+G+AGD   L  S+P LA A +++   +   DL+QV   M  V   A G +G+       RGL+  V   LG PL K QQ S+W  RPL   QL YAATDA  L+    AL R  AR
Sbjct:  198 SLMQVAVEGRVFLLDLPELLSPA-----GGPAPRAFSRLVSQLLSEPSVMKLGYGMAGDLRSLGASYPALAHAEKQLRGSL---DLLQVHKQMRVVDMPAPGVDGARGP----RGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLVYAATDAYCLLEVYWALCREPAR 355          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5A8DE45_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DE45_CAFRO)

HSP 1 Score: 79.7 bits (195), Expect = 3.070e-14
Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGG--------SGE-GGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVE--KAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALA 159
            S LQLA  G + V+DLL L       ++G         SG+     E L  +M + ++VKVG+GL+GD A++  SH +L      + P+++  D +   A      A G     E   A  A GL+ AV   LG  L K +QTSDWQ R LS AQ+ YAA DA+A   LA
Sbjct:   48 STLQLATLGRSWVVDLLALHAEAVAGADGALPPPWHVPSGDLSRAVEALSAVMADPSVVKVGWGLSGDLAKVAASHCFLLRPLHVVEPILDLRDALGTLAR-----AAGEAAPAELCAAADASGLSNAVREVLGGRLSKKEQTSDWQRRELSVAQIRYAAIDALATAHLA 212          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: UPI000C9DD8FB (exonuclease mut-7 homolog isoform X8 n=2 Tax=Equus TaxID=9789 RepID=UPI000C9DD8FB)

HSP 1 Score: 77.8 bits (190), Expect = 2.260e-13
Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 174
            SL+Q+AV G   ++DLL L+   +  S          +L+  L+ + ++ K+G+G+AGD   L  S P LA   +++   +   DL QV   M   D      SV+     RGL+  V   LG PL K QQ S+W  RPLS AQL YAATDA  L+ + R + R    F  + D
Sbjct:  436 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDSTRFHLSED 594          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: UPI001D04A8B2 (exonuclease mut-7 homolog isoform X10 n=1 Tax=Equus asinus TaxID=9793 RepID=UPI001D04A8B2)

HSP 1 Score: 77.8 bits (190), Expect = 2.270e-13
Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 174
            SL+Q+AV G   ++DLL L+   +  S          +L+  L+ + ++ K+G+G+AGD   L  S P LA   +++   +   DL QV   M   D      SV+     RGL+  V   LG PL K QQ S+W  RPLS AQL YAATDA  L+ + R + R    F  + D
Sbjct:  309 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDPTRFHLSED 467          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A8C4MJV0_EQUAS (Exonuclease 3'-5' domain containing 3 n=6 Tax=Equus TaxID=9789 RepID=A0A8C4MJV0_EQUAS)

HSP 1 Score: 77.8 bits (190), Expect = 2.300e-13
Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 174
            SL+Q+AV G   ++DLL L+   +  S          +L+  L+ + ++ K+G+G+AGD   L  S P LA   +++   +   DL QV   M   D      SV+     RGL+  V   LG PL K QQ S+W  RPLS AQL YAATDA  L+ + R + R    F  + D
Sbjct:  395 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDPTRFHLSED 553          
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5F5PZQ0_HORSE (Exonuclease 3'-5' domain containing 3 n=12 Tax=Equus TaxID=9789 RepID=A0A5F5PZQ0_HORSE)

HSP 1 Score: 77.8 bits (190), Expect = 2.310e-13
Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 0
Query:    1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 174
            SL+Q+AV G   ++DLL L+   +  S          +L+  L+ + ++ K+G+G+AGD   L  S P LA   +++   +   DL QV   M   D      SV+     RGL+  V   LG PL K QQ S+W  RPLS AQL YAATDA  L+ + R + R    F  + D
Sbjct:  406 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDSTRFHLSED 564          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7RVS6_PIPKU1.450e-1635.75Exonuclease 3'-5' domain containing 3 n=8 Tax=Pipi... [more]
A0A1Q9DP09_SYMMI8.400e-1538.27Exonuclease mut-7-like n=5 Tax=Symbiodinium TaxID=... [more]
A0A812JDC3_9DINO8.600e-1538.27EXD3 protein n=1 Tax=Symbiodinium sp. CCMP2456 Tax... [more]
A0A5A8DB93_CAFRO1.590e-1437.653'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A5N4EB12_CAMDR1.880e-1438.24Exonuclease mut-7-like protein n=1 Tax=Camelus dro... [more]
A0A5A8DE45_CAFRO3.070e-1437.65Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
UPI000C9DD8FB2.260e-1336.21exonuclease mut-7 homolog isoform X8 n=2 Tax=Equus... [more]
UPI001D04A8B22.270e-1336.21exonuclease mut-7 homolog isoform X10 n=1 Tax=Equu... [more]
A0A8C4MJV0_EQUAS2.300e-1336.21Exonuclease 3'-5' domain containing 3 n=6 Tax=Equu... [more]
A0A5F5PZQ0_HORSE2.310e-1336.21Exonuclease 3'-5' domain containing 3 n=12 Tax=Equ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..165
e-value: 2.7E-27
score: 97.2
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 38..162
e-value: 8.8E-9
score: 35.3
NoneNo IPR availablePANTHERPTHR13620:SF42EXONUCLEASE MUT-7 HOMOLOGcoord: 1..158
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 1..158
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67387contigM-pyrifera_M_contig67387:58..753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67387.16283.1mRNA_M-pyrifera_M_contig67387.16283.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67387 58..753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67387.16283.1 ID=prot_M-pyrifera_M_contig67387.16283.1|Name=mRNA_M-pyrifera_M_contig67387.16283.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp
SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLV
KVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGG
SEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAAT
DAVALVALARRVARLVHPFQAARDEEGGGEGVVSSP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf